Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_F09
(964 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58517| Best HMM Match : Ribosomal_L30_N (HMM E-Value=1.5e-32) 154 1e-37
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.028
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 35 0.11
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 35 0.11
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 35 0.11
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.46
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 33 0.46
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 32 0.60
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.80
SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 31 1.1
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 31 1.1
SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4) 31 1.8
SB_38639| Best HMM Match : Avirulence (HMM E-Value=1.5) 30 2.4
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 30 3.2
SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 29 7.4
SB_3843| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_13893| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 28 9.8
>SB_58517| Best HMM Match : Ribosomal_L30_N (HMM E-Value=1.5e-32)
Length = 245
Score = 154 bits (373), Expect = 1e-37
Identities = 79/139 (56%), Positives = 97/139 (69%)
Frame = +1
Query: 178 EDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKE 357
+D K+P VPE++LK + L ++ K++EIFKRAE+YVKEYR KE
Sbjct: 3 QDRVKVPRVPETLLKKRKSLEQIKAARAKAQLAQKKLQHGKRKEIFKRAEKYVKEYRQKE 62
Query: 358 RDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRL 537
DE+R+ + A+ GN+YVP EA+LAFVIRIRGIN VSPKVRK+LQL RLRQINNGVFVRL
Sbjct: 63 VDELRMKKMAKKHGNFYVPPEARLAFVIRIRGINGVSPKVRKILQLLRLRQINNGVFVRL 122
Query: 538 NKATVNIXPISPXPXICLG 594
NKAT N+ I P I G
Sbjct: 123 NKATANMLRI-VQPYIAFG 140
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 36.7 bits (81), Expect = 0.028
Identities = 23/74 (31%), Positives = 23/74 (31%)
Frame = +2
Query: 722 PXTPPXXXXLRPPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXPXGX 901
P P L PPPP P P P PP G AP PP P G
Sbjct: 923 PPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPP---PPGG 979
Query: 902 XLXSPXXNXXPXPP 943
P P PP
Sbjct: 980 SAPPPPPPPPPPPP 993
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 34.7 bits (76), Expect = 0.11
Identities = 29/109 (26%), Positives = 33/109 (30%), Gaps = 1/109 (0%)
Frame = +2
Query: 620 PPXXXFTXPCXPPXXXGXXFXXSLPXXXXXKKXAPXTPPXXXXLRPPPPXXXXXXGXXFP 799
PP + P PP G P + P PP RPPPP G P
Sbjct: 207 PPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGEN--RPPPPMRGPTSGGE-P 263
Query: 800 XXPXXXPXAPXK-FETPPXXGXAPQTPPXFXPXGXXLXSPXXNXXPXPP 943
P P P + PP F G L P + P PP
Sbjct: 264 PPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPL-PPSRDQAPAPP 311
Score = 33.5 bits (73), Expect = 0.26
Identities = 33/121 (27%), Positives = 36/121 (29%), Gaps = 13/121 (10%)
Frame = +2
Query: 620 PPXXXFTXPCXPPXXX--GXXFXXSLPXXXXXKKXAPXTPPXXXXLRPPPPXXXXXX--- 784
PP + P PP F P + AP PP PPPP
Sbjct: 272 PPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLP 331
Query: 785 -----GXXFPXXPXXX-PXAPXKFETPPXXGXAPQT--PPXFXPXGXXLXSPXXNXXPXP 940
G P P P + PP G APQ P P G S N P P
Sbjct: 332 PPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRPPSGKINPPPPP 391
Query: 941 P 943
P
Sbjct: 392 P 392
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 34.7 bits (76), Expect = 0.11
Identities = 29/109 (26%), Positives = 33/109 (30%), Gaps = 1/109 (0%)
Frame = +2
Query: 620 PPXXXFTXPCXPPXXXGXXFXXSLPXXXXXKKXAPXTPPXXXXLRPPPPXXXXXXGXXFP 799
PP + P PP G P + P PP RPPPP G P
Sbjct: 119 PPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGEN--RPPPPMRGPTSGGE-P 175
Query: 800 XXPXXXPXAPXK-FETPPXXGXAPQTPPXFXPXGXXLXSPXXNXXPXPP 943
P P P + PP F G L P + P PP
Sbjct: 176 PPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPL-PPSRDQAPAPP 223
Score = 33.5 bits (73), Expect = 0.26
Identities = 33/121 (27%), Positives = 36/121 (29%), Gaps = 13/121 (10%)
Frame = +2
Query: 620 PPXXXFTXPCXPPXXX--GXXFXXSLPXXXXXKKXAPXTPPXXXXLRPPPPXXXXXX--- 784
PP + P PP F P + AP PP PPPP
Sbjct: 184 PPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLP 243
Query: 785 -----GXXFPXXPXXX-PXAPXKFETPPXXGXAPQT--PPXFXPXGXXLXSPXXNXXPXP 940
G P P P + PP G APQ P P G S N P P
Sbjct: 244 PPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRPPSGKINPPPPP 303
Query: 941 P 943
P
Sbjct: 304 P 304
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 34.7 bits (76), Expect = 0.11
Identities = 29/109 (26%), Positives = 33/109 (30%)
Frame = -2
Query: 891 GXKXGGVWGAXPXXGGVSNLXGAXGXXXGXXGNXXPXXXXXXGGGGRKXXXXGGVXGAXF 712
G + GG +G GG G G G GGGG GG G +
Sbjct: 125 GGRRGGGYGGGRGGGGGYRSGGGYRGGGGYRGGGGGYRGRGRGGGG---YGGGGYGGGGY 181
Query: 711 XXXXXWGRXWXXXXPXXXGGXXGXVKXXXGGXXXEGGGXPQTNXGXGGY 565
G + GG G GG GGG G GGY
Sbjct: 182 GGGGHGGGGYGGGGYGGGGGGYGG-SGYGGGGGYGGGGYGGGRSGGGGY 229
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 33.5 bits (73), Expect = 0.26
Identities = 28/110 (25%), Positives = 31/110 (28%), Gaps = 3/110 (2%)
Frame = +2
Query: 623 PXXXFTXPCXPPXXXGXXFXXSLPXXXXXKKXAPXTPPXXXXLRPPPPXXXXXXGXXFPX 802
P + P PP + AP PP PPPP P
Sbjct: 90 PNPPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNP-PYPPPPNAPYPPSPNAPY 148
Query: 803 XPXXXPXAPXKFETP---PXXGXAPQTPPXFXPXGXXLXSPXXNXXPXPP 943
P P P P P AP PP + P P N P PP
Sbjct: 149 PPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPN-PPYPP 197
Score = 31.9 bits (69), Expect = 0.80
Identities = 28/111 (25%), Positives = 31/111 (27%), Gaps = 4/111 (3%)
Frame = +2
Query: 620 PPXXXFTXPCXPPXXXGXXFXXSLPXXXXXKKXAPXTPPXXXXLRPPPPXXXXXXGXXFP 799
PP + P PP P P PP L PPPP +P
Sbjct: 119 PPNAPYPPPPNPPYPPPPN--APYPPSPNAPYPPPPNPPYPPPLYPPPP-NPPPPNAPYP 175
Query: 800 XXPXXXPXAPXKFETP----PXXGXAPQTPPXFXPXGXXLXSPXXNXXPXP 940
P P P P P AP PP P +P P P
Sbjct: 176 PPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPP 226
>SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.7 bits (71), Expect = 0.46
Identities = 31/110 (28%), Positives = 32/110 (29%), Gaps = 3/110 (2%)
Frame = -2
Query: 891 GXKXGGVWGAXPXXGGVSNLXGAXGXXXGXXGNXXPXXXXXXGGGGRKXXXXGGVXGAXF 712
G GG GA GG + G G G G GGGG GG G
Sbjct: 244 GGATGGGGGATGGGGGAT---GGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGG 300
Query: 711 XXXXXWGRXWXXXXPXXXGG---XXGXVKXXXGGXXXEGGGXPQTNXGXG 571
G GG G V GG GGG T G G
Sbjct: 301 GATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGGVTGGGGG 350
Score = 31.5 bits (68), Expect = 1.1
Identities = 23/74 (31%), Positives = 24/74 (32%)
Frame = -2
Query: 942 GGXGXXXXXGXQRXXPXGXKXGGVWGAXPXXGGVSNLXGAXGXXXGXXGNXXPXXXXXXG 763
GG G G G GG GA GG + G G G G G
Sbjct: 276 GGGGGATGGGGGATGGGGGATGGGGGATGGGGGAT---GVGGGATGGGGGATGGGVGATG 332
Query: 762 GGGRKXXXXGGVXG 721
GGG GGV G
Sbjct: 333 GGGGATGGGGGVTG 346
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 32.7 bits (71), Expect = 0.46
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +2
Query: 692 PXXXXXKKXAPXTPPXXXXLRPPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQ 871
P + AP PP PPPP P P PP G AP
Sbjct: 305 PPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPP 364
Query: 872 TPP 880
PP
Sbjct: 365 PPP 367
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 32.3 bits (70), Expect = 0.60
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 722 PXTPPXXXXLRPPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXP 892
P PP PPPP P P P P PP AP PP P
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 31.9 bits (69), Expect = 0.80
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 749 LRPPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXPXGXXLXSPXXNX 928
+ PPPP P P P +P PP P PP P P
Sbjct: 363 MSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Query: 929 XPXPP 943
P PP
Sbjct: 423 PPPPP 427
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +2
Query: 755 PPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXPXGXXLXSPXXNXXP 934
PPPP P P P P + PP P PP P P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Query: 935 XPP 943
PP
Sbjct: 428 PPP 430
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +2
Query: 755 PPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXPXGXXLXSPXXNXXP 934
PPPP P P P P PP P PP P P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Query: 935 XPP 943
PP
Sbjct: 429 PPP 431
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 722 PXTPPXXXXLRPPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXP 892
P PP PPPP P P P P PP P PP P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 722 PXTPPXXXXLRPPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPP 880
P PP PPPP P P P P PP P PP
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/63 (26%), Positives = 18/63 (28%)
Frame = +2
Query: 755 PPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXPXGXXLXSPXXNXXP 934
PPPP P P P PP P PP P +P P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Query: 935 XPP 943
PP
Sbjct: 427 PPP 429
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 722 PXTPPXXXXLRPPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXP 892
P PP PPPP P P P P PP P PP P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSP--PPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 28.3 bits (60), Expect = 9.8
Identities = 17/62 (27%), Positives = 18/62 (29%)
Frame = +2
Query: 722 PXTPPXXXXLRPPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXPXGX 901
P +PP PP P P P P P PP P PP P
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPAL 434
Query: 902 XL 907
L
Sbjct: 435 RL 436
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 31.9 bits (69), Expect = 0.80
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +2
Query: 755 PPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXPXGXXLXSPXXNXXP 934
PPPP P P P AP PP AP PP P P
Sbjct: 51 PPPPPSPPAAAPAAPPPPAAAPAAPPPPAAPP---AAPPPPPPLPAPPPPPAQPAPQPPP 107
Query: 935 XPP 943
PP
Sbjct: 108 APP 110
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +2
Query: 722 PXTPPXXXXLRPPPPXXXXXXGXXFPXXPXXXPXAPXKFET--PPXXGXAPQTPP 880
P +PP PPPP P P P P PP APQ PP
Sbjct: 54 PPSPPAAAPAAPPPPAAAPAAPPP-PAAPPAAPPPPPPLPAPPPPPAQPAPQPPP 107
>SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = -2
Query: 891 GXKXGGVWGAXPXXGGVSNLXGAXGXXXGXXGNXXPXXXXXXGGGGRKXXXXGGVXGA 718
G GGV G GG N GA G G + GGG GG GA
Sbjct: 33 GVGGGGVGGGGGNGGGAGNGVGAGGCGCGGGNDGGNGGGGAGNGGGGGGAGNGGAAGA 90
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 755 PPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPP 880
PPPP G P P P PP G AP PP
Sbjct: 663 PPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPPP 704
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +2
Query: 728 TPPXXXXLRPPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXP 892
TPP PPP G P P P P PP G P PP P
Sbjct: 364 TPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPP----PPPTNGPPPPPPPTNGP 414
Score = 30.3 bits (65), Expect = 2.4
Identities = 23/74 (31%), Positives = 23/74 (31%)
Frame = +2
Query: 722 PXTPPXXXXLRPPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXPXGX 901
P PP PPPP P P P P PP G P PP P
Sbjct: 346 PPPPPTNNPPSPPPPTNNTPP----PPPPTNKPPPPP----PPTNGPPPPPPPTNGPPPP 397
Query: 902 XLXSPXXNXXPXPP 943
P N P PP
Sbjct: 398 P---PPTNGPPPPP 408
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/75 (25%), Positives = 20/75 (26%)
Frame = +2
Query: 719 APXTPPXXXXLRPPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXPXG 898
+P PP R PPP P P A PP A P P
Sbjct: 125 SPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLA 184
Query: 899 XXLXSPXXNXXPXPP 943
P P PP
Sbjct: 185 AASPPPPSGGPPPPP 199
>SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4)
Length = 186
Score = 30.7 bits (66), Expect = 1.8
Identities = 27/107 (25%), Positives = 27/107 (25%)
Frame = -2
Query: 891 GXKXGGVWGAXPXXGGVSNLXGAXGXXXGXXGNXXPXXXXXXGGGGRKXXXXGGVXGAXF 712
G G G GG G G G G GGGG GG G
Sbjct: 63 GGGGGATGGGGGATGGHGGATGGGGGATGDGGGATGGGGGATGGGGGATGGHGGATGGGV 122
Query: 711 XXXXXWGRXWXXXXPXXXGGXXGXVKXXXGGXXXEGGGXPQTNXGXG 571
G G G GG GGG T G G
Sbjct: 123 GATGGHG----GATGGHGGATGGHGGATGGGGGATGGGGGATGGGGG 165
Score = 29.5 bits (63), Expect = 4.2
Identities = 23/74 (31%), Positives = 24/74 (32%)
Frame = -2
Query: 942 GGXGXXXXXGXQRXXPXGXKXGGVWGAXPXXGGVSNLXGAXGXXXGXXGNXXPXXXXXXG 763
GG G G G GGV GA GG + G G G G G
Sbjct: 99 GGGGATGGGGGATGGHGGATGGGV-GATGGHGGAT---GGHGGATGGHGGATGGGGGATG 154
Query: 762 GGGRKXXXXGGVXG 721
GGG GG G
Sbjct: 155 GGGGATGGGGGATG 168
>SB_38639| Best HMM Match : Avirulence (HMM E-Value=1.5)
Length = 546
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 377 PDKHAIVATTTFPGKPNWHLSSESVVSTKFHRRSV 481
P +HA T P + N H +S S +T RRSV
Sbjct: 318 PFRHATTTITVLPSRYNNHTASSSHATTTIQRRSV 352
>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
Length = 426
Score = 29.9 bits (64), Expect = 3.2
Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = +2
Query: 722 PXTPPXXXXLRPPP-PXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPPXFXPXG 898
P TPP PPP P P P P P + P +P PP P
Sbjct: 286 PMTPPPAVVTAPPPAPPLPNFTSPSPPPPPPLPPAMPAMDDLLPPEVLSPPPPP--PPSE 343
Query: 899 XXLXSPXXNXXPXPP 943
P P PP
Sbjct: 344 DFYSMPSSLPMPSPP 358
>SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1150
Score = 29.5 bits (63), Expect = 4.2
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -3
Query: 533 RTNTPLFIWRSLNSCRTLRTFGETWLIPRIRMTNANLASPGT**LPRLRACLASLISSRS 354
RT PLF L C R TW P + + + L + +A L+ +RS
Sbjct: 295 RTRAPLFYSFLLTGCTARRRENVTW-FPSMALAGSILLKQRCSDMNTTACIMAVLVKTRS 353
Query: 353 LMRYSLTY--CSALLKIS 306
+ ++ L + CS+ ++IS
Sbjct: 354 MEQFLLLFIVCSSEIQIS 371
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 28.7 bits (61), Expect = 7.4
Identities = 26/102 (25%), Positives = 26/102 (25%)
Frame = -2
Query: 876 GVWGAXPXXGGVSNLXGAXGXXXGXXGNXXPXXXXXXGGGGRKXXXXGGVXGAXFXXXXX 697
G WG G G G G P G GG GG G
Sbjct: 6 GGWGRGSGGGWGQGPGGGWGRGQGGGMGRGPGGGWGRGSGGGWGRMQGG--GMGRGPGGG 63
Query: 696 WGRXWXXXXPXXXGGXXGXVKXXXGGXXXEGGGXPQTNXGXG 571
WGR GG G G EGG G G
Sbjct: 64 WGRMQGGGMGRGPGGGLGRGPGGGWGRMQEGGMGRGPGQGWG 105
>SB_3843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 28.7 bits (61), Expect = 7.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 280 RSSAIKKKREIFKRAEQYVKEYRIKERDEIRLARQARNRGNY 405
R AI ++RE+++R E Y + + R+ R R R Y
Sbjct: 16 RRRAINRRREMYRRREMYRRREMYRRREMYRRREMYRRREMY 57
>SB_13893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 280 RSSAIKKKREIFKRAEQYVKEYRIKERDEIRLARQARNRGNY 405
R + ++REI++R E Y + + R+ RL R R Y
Sbjct: 27 RRREMYRRREIYRRREMYRRREMYRRREMYRLREMYRRREMY 68
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 28.3 bits (60), Expect = 9.8
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 722 PXTPPXXXXLRPPPPXXXXXXGXXFPXXPXXXPXAPXKFETPPXXGXAPQTPP 880
P PP PPPP P P A E PP P PP
Sbjct: 208 PPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPPTLPP 260
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,973,544
Number of Sequences: 59808
Number of extensions: 369136
Number of successful extensions: 1204
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2836293838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -