Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_F08
         (845 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9U982 Cluster: Drosophila dodeca-satellite protein 1; ...    58   2e-07
UniRef50_Q4TC04 Cluster: Chromosome undetermined SCAF7065, whole...    52   2e-05
UniRef50_Q17832 Cluster: Putative uncharacterized protein; n=2; ...    49   2e-04
UniRef50_Q00341 Cluster: Vigilin; n=84; Coelomata|Rep: Vigilin -...    49   2e-04
UniRef50_A7SFJ6 Cluster: Predicted protein; n=1; Nematostella ve...    47   7e-04
UniRef50_UPI0000ECCDBB Cluster: SERPINB11g.; n=3; Amniota|Rep: S...    35   3.0  
UniRef50_O59810 Cluster: Vigilin; n=1; Schizosaccharomyces pombe...    35   3.0  

>UniRef50_Q9U982 Cluster: Drosophila dodeca-satellite protein 1;
           n=9; Endopterygota|Rep: Drosophila dodeca-satellite
           protein 1 - Drosophila melanogaster (Fruit fly)
          Length = 1301

 Score = 58.4 bits (135), Expect = 2e-07
 Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
 Frame = +2

Query: 287 SFAYDDLFPALPHSQPL----GAT*YTTGYKQTSSWLFTAHSSFPCAI*RTKT*HANTLV 454
           +F+YDDLFPALP +       GA+  T     +S      H   PC   R  T       
Sbjct: 59  AFSYDDLFPALPANTSAQSQSGASGSTLARVTSSQKTHIVH--VPCKE-RKSTESEKFGE 115

Query: 455 RENP*ELAIHN*GYRSHIEISTSKDGSLTFLITGKQSAVLXARRQILTHFQQQASNQXSI 634
            E+            + IEI + K+ SLTFLI GKQS +L ARR+IL  F  QAS Q ++
Sbjct: 116 GESKRICQQITKETGAQIEIVSGKNQSLTFLIKGKQSELLDARRKILMGFSTQASRQVTV 175

Query: 635 PKE 643
           P+E
Sbjct: 176 PRE 178


>UniRef50_Q4TC04 Cluster: Chromosome undetermined SCAF7065, whole
           genome shotgun sequence; n=5; Euteleostomi|Rep:
           Chromosome undetermined SCAF7065, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 1399

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 22/48 (45%), Positives = 34/48 (70%)
 Frame = +2

Query: 500 SHIEISTSKDGSLTFLITGKQSAVLXARRQILTHFQQQASNQXSIPKE 643
           +HIE+S +KD  L+ ++TGK  +V+ AR++I+   Q QAS   +IPKE
Sbjct: 165 AHIELSLAKDQGLSIMVTGKHDSVMKARKEIVARLQTQASATVAIPKE 212


>UniRef50_Q17832 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 1220

 Score = 48.8 bits (111), Expect = 2e-04
 Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 13/146 (8%)
 Frame = +2

Query: 245 HVEEMNNVGYENN-----VSFAYDDLFPALPHSQPLGAT*YTTGYKQTSSWLFTAHSSFP 409
           H+EE NNV  +       +SF+Y   FP LP + P  A       KQT  W     S   
Sbjct: 5   HIEETNNVEIDPATGGAVMSFSYASDFPTLPDAAPASAP----TAKQTHVWSRPTLSKSE 60

Query: 410 CAI*--------RTKT*HANTLVRENP*ELAIHN*GYRSHIEISTSKDGSLTFLITGKQS 565
             I           K     +   E+    AI     ++ IE+S SKDG LT ++ G+++
Sbjct: 61  VNITFRLASDERSNKVKSFGSTSEESKKAQAIAT-ATKTRIELSESKDGELTVVVKGERA 119

Query: 566 AVLXARRQILTHFQQQASNQXSIPKE 643
               AR +I+   Q QAS +  IPK+
Sbjct: 120 KAEEARARIIRDLQTQASREIDIPKD 145


>UniRef50_Q00341 Cluster: Vigilin; n=84; Coelomata|Rep: Vigilin -
           Homo sapiens (Human)
          Length = 1268

 Score = 48.8 bits (111), Expect = 2e-04
 Identities = 21/48 (43%), Positives = 33/48 (68%)
 Frame = +2

Query: 500 SHIEISTSKDGSLTFLITGKQSAVLXARRQILTHFQQQASNQXSIPKE 643
           +H+E+S +KD  L+ +++GK  AV+ AR+ I+   Q QAS   +IPKE
Sbjct: 113 AHLELSLAKDQGLSIMVSGKLDAVMKARKDIVARLQTQASATVAIPKE 160


>UniRef50_A7SFJ6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1175

 Score = 46.8 bits (106), Expect = 7e-04
 Identities = 22/46 (47%), Positives = 29/46 (63%)
 Frame = +2

Query: 506 IEISTSKDGSLTFLITGKQSAVLXARRQILTHFQQQASNQXSIPKE 643
           IE+S  KD SLT ++TGK   V  ARR +L+  Q QA  +  IP+E
Sbjct: 96  IEVSLGKDLSLTIMVTGKPDTVAKARRLVLSQLQTQAQIEIQIPRE 141


>UniRef50_UPI0000ECCDBB Cluster: SERPINB11g.; n=3; Amniota|Rep:
           SERPINB11g. - Gallus gallus
          Length = 408

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = +3

Query: 339 VQRNIQQATNKLRVGSSLHTQVFHVPYEERKLDMLILW*GRILKNLPFITKDTGATSKY 515
           VQ   Q+ T KL     L TQV  +PY ++ L M+IL  G      P   + T +T  Y
Sbjct: 223 VQMMYQKGTFKLGYIEELGTQVLELPYAQKLLSMIILLPGETADGSPSGLEQTESTMTY 281


>UniRef50_O59810 Cluster: Vigilin; n=1; Schizosaccharomyces
           pombe|Rep: Vigilin - Schizosaccharomyces pombe (Fission
           yeast)
          Length = 1279

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 500 SHIEIST-SKDGSLTFLITGKQSAVLXARRQIL 595
           + I +ST SK  + TFLI GK SAV  ARRQIL
Sbjct: 186 TRINVSTASKTKNTTFLIQGKTSAVKAARRQIL 218


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,835,333
Number of Sequences: 1657284
Number of extensions: 14394478
Number of successful extensions: 33150
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33119
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)