Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_F07
         (883 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    28   0.084
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    28   0.084
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   4.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.3  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 0.084
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 158 KYYRGFNDRKEKAHSIYFQNTRNIFWCCSRHFSYYFQN 45
           K  +  N+ +EK+H   F  +   FW    + SY F N
Sbjct: 101 KMVQNHNNIREKSHYCLFVASNCFFWSYQSYMSYIFAN 138


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 28.3 bits (60), Expect = 0.084
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 158 KYYRGFNDRKEKAHSIYFQNTRNIFWCCSRHFSYYFQN 45
           K  +  N+ +EK+H   F  +   FW    + SY F N
Sbjct: 101 KMVQNHNNIREKSHYCLFVASNCFFWSYQSYMSYIFAN 138


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 119 HSIYFQNTRNIFWCCSRHFSYYFQN 45
           +SI  Q  +++F    RH   YFQN
Sbjct: 133 YSICVQTEKSVFDFLCRHTVEYFQN 157


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -3

Query: 470 LNCIYYTIIVKLIINMYKQLITILFHNSCS 381
           L CIYY     +I  ++   +  ++H  C+
Sbjct: 143 LLCIYYFYCAFIIFTVHLLFLLCIYHFFCA 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,121
Number of Sequences: 336
Number of extensions: 1888
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)