Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_F04
(893 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 200 4e-50
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 198 1e-49
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 187 3e-46
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 183 6e-45
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 157 4e-37
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 149 9e-35
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 148 2e-34
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 146 9e-34
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 124 2e-27
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 112 1e-23
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 103 6e-21
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 100 4e-20
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 76 1e-12
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 4e-12
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 69 1e-10
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 68 3e-10
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 59 1e-07
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 59 2e-07
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 1e-06
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 54 6e-06
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 49 2e-04
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 48 4e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 46 0.001
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 42 0.016
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 37 0.80
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 36 1.8
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 3.2
UniRef50_UPI00006CDDBC Cluster: hypothetical protein TTHERM_0029... 34 4.3
UniRef50_Q7RWY4 Cluster: Putative uncharacterized protein NCU087... 34 4.3
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 200 bits (488), Expect = 4e-50
Identities = 89/102 (87%), Positives = 97/102 (95%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 284
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 285 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 410
T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAAY TG
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTG 102
Score = 108 bits (259), Expect = 2e-22
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 484 GDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHSIXRXPXXXA 660
G+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGL +PHS+ R P A
Sbjct: 127 GEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSA 185
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 198 bits (484), Expect = 1e-49
Identities = 87/102 (85%), Positives = 98/102 (96%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 284
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 285 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 410
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 95.1 bits (226), Expect = 2e-18
Identities = 41/55 (74%), Positives = 45/55 (81%)
Frame = +1
Query: 484 GDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHSIXRXP 648
GDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL +PHS R P
Sbjct: 127 GDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFP 181
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 187 bits (456), Expect = 3e-46
Identities = 84/102 (82%), Positives = 94/102 (92%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 284
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 285 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 410
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATG 102
Score = 64.1 bits (149), Expect = 5e-09
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +1
Query: 484 GDEYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHSIXR 642
G++YNVE D P F+ LD+GLARTTTG+++F MKG DGG+ VPHS R
Sbjct: 127 GEDYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESR 178
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 183 bits (445), Expect = 6e-45
Identities = 81/89 (91%), Positives = 87/89 (97%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 284
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 285 TCQVAYSRIEGDHIVCAAYSHELPRYGVK 371
TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 101 bits (242), Expect = 2e-20
Identities = 47/61 (77%), Positives = 49/61 (80%)
Frame = +1
Query: 484 GDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHSIXRXPXXXAY 663
GDEYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGL +PHS R P A
Sbjct: 96 GDEYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAE 155
Query: 664 S 666
S
Sbjct: 156 S 156
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 157 bits (381), Expect = 4e-37
Identities = 66/102 (64%), Positives = 89/102 (87%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 284
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 285 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 410
Q+ ++I GD +V AAY+HELP +G++ GLTNYAAAY+TG
Sbjct: 84 IAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATG 125
Score = 64.9 bits (151), Expect = 3e-09
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = +1
Query: 529 FRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHSIXRXP 648
F+ LDVGLARTTTGARVFG +KGAVDGG+ VPH R P
Sbjct: 171 FKAILDVGLARTTTGARVFGVLKGAVDGGMAVPHRPNRFP 210
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 149 bits (361), Expect = 9e-35
Identities = 66/102 (64%), Positives = 82/102 (80%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 284
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 285 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 410
CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATG 102
Score = 52.4 bits (120), Expect = 2e-05
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 529 FRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHSIXRXP 648
F LD+GL R+T G RVF A+KGA DGG+ +PH+ R P
Sbjct: 137 FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRFP 176
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 148 bits (359), Expect = 2e-34
Identities = 69/102 (67%), Positives = 80/102 (78%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 284
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 285 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 410
CQ+A S IEGD I+ A S EL RYG+ VGL NYAAAY+TG
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATG 102
Score = 57.2 bits (132), Expect = 5e-07
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +1
Query: 532 RCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHSIXRXP 648
+ +LDVG+ RTTTG RVF A+KGA DGGL +PH R P
Sbjct: 146 KAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFP 184
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 146 bits (353), Expect = 9e-34
Identities = 65/99 (65%), Positives = 77/99 (77%), Gaps = 2/99 (2%)
Frame = +3
Query: 120 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 293
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 294 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 410
V Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y+TG
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATG 111
Score = 72.5 bits (170), Expect = 1e-11
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +1
Query: 484 GDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHSIXR 642
G++Y+VE D F+C+LD GL RT+TGARVF A+KGAVDGGL +PH+ R
Sbjct: 136 GEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKR 188
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 124 bits (300), Expect = 2e-27
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = +3
Query: 117 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 296
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 297 AYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 410
+ + GD VC A S ELP+YG+K+GL+NY AAY+TG
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATG 101
Score = 63.3 bits (147), Expect = 8e-09
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +1
Query: 529 FRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHSIXR 642
F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++ R
Sbjct: 136 FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCR 173
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 112 bits (269), Expect = 1e-23
Identities = 46/85 (54%), Positives = 66/85 (77%)
Frame = +3
Query: 156 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 335
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 336 AYSHELPRYGVKVGLTNYAAAYSTG 410
A S+EL R+GV GL +YAAAY+TG
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATG 391
Score = 63.7 bits (148), Expect = 6e-09
Identities = 31/71 (43%), Positives = 38/71 (53%)
Frame = +1
Query: 436 KDLDLTPYTLAQQMSQGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 615
K + L Q G +NV+ F+ LD GL RTTTG RVFG +KGA DGG
Sbjct: 400 KQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGACDGG 459
Query: 616 LXVPHSIXRXP 648
+ +PHS R P
Sbjct: 460 INIPHSESRFP 470
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 197
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 103 bits (247), Expect = 6e-21
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 284
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 285 TCQVAYSRIEGD 320
T Q+ + I GD
Sbjct: 72 TAQIISASIAGD 83
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 100 bits (240), Expect = 4e-20
Identities = 44/93 (47%), Positives = 63/93 (67%)
Frame = +3
Query: 132 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 311
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 312 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 410
+GD ++ A S EL RYG+ G TNY+AAY+TG
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYATG 96
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +1
Query: 493 YNV-EPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHS 633
Y+V + +D A R +LD+GLAR+T GARVFGA+KGA D GL VPHS
Sbjct: 122 YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHS 169
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 76.2 bits (179), Expect = 1e-12
Identities = 35/94 (37%), Positives = 56/94 (59%)
Frame = +3
Query: 129 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 308
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 309 IEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 410
++GD I+ ++Y L + K NY +Y G
Sbjct: 69 VDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLG 102
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +1
Query: 463 LAQQMSQGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHS 633
L +++ Q + YN + N +D+GL R T G + F +MKG+VD G+ +PH+
Sbjct: 109 LIEKVKQSETYNKK---NYSSKITAIIDIGLKRATIGNKSFASMKGSVDSGINIPHN 162
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 4e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3
Query: 255 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 410
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = +1
Query: 550 GLARTTTGARVFGAMKGAVDGGLXVPHSIXRXPXXXAYS 666
GLARTTTG +VFGA+K VD GL +PHS P + S
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVS 109
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +3
Query: 147 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 326
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 327 VCAAYSHEL-PRYGVKVGLTNYAAAYSTG 410
+ AA+S EL ++G K N AAY TG
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 523 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHS 633
G LDVGL + G+RVF A+KGA+D G+ +PHS
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHS 134
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 68.1 bits (159), Expect = 3e-10
Identities = 38/88 (43%), Positives = 50/88 (56%)
Frame = +3
Query: 147 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 326
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 327 VCAAYSHELPRYGVKVGLTNYAAAYSTG 410
+ AAYS EL YG + + AAY TG
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAYLTG 86
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +1
Query: 541 LDVGLARTTTGARVFGAMKGAVDGGLXVPH 630
LD+GLAR GARVF A+KGAVD GL VP+
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLDVPY 132
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 66.1 bits (154), Expect = 1e-09
Identities = 31/55 (56%), Positives = 37/55 (67%)
Frame = +1
Query: 484 GDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHSIXRXP 648
G+ Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL VPHS R P
Sbjct: 76 GEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVPHSEKRFP 130
Score = 59.7 bits (138), Expect = 1e-07
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 267 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 410
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTG 51
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +3
Query: 147 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 326
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 327 VCAAYSHELPRYGVKVGLTNYAAAYSTG 410
+A S EL +YG N AAY TG
Sbjct: 59 YSSAVSSELAKYGYTGATGNTTAAYLTG 86
Score = 37.9 bits (84), Expect = 0.35
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 541 LDVGLARTTTGARVFGAMKGAVDGGLXVPHS 633
LD+GL ++ G+RV+ A+KG VD G +P S
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCS 133
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 58.8 bits (136), Expect = 2e-07
Identities = 34/88 (38%), Positives = 48/88 (54%)
Frame = +3
Query: 147 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 326
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 327 VCAAYSHELPRYGVKVGLTNYAAAYSTG 410
+ +A+S +L YG + N +AY TG
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 40.7 bits (91), Expect = 0.049
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 523 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHS 633
G LD+GL T G++VF +GA+D GL +PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 1e-06
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +3
Query: 153 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 248
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 53.6 bits (123), Expect = 6e-06
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +3
Query: 150 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 329
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 330 CAAYSHELPRYGVKVGLTNYAAAYSTG 410
+A S L +G N +AAY TG
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAYLTG 86
Score = 37.1 bits (82), Expect = 0.60
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 541 LDVGLARTTTGARVFGAMKGAVDGGLXVPHS 633
LD+G+ + G +++ +KGA+D GL +PH+
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHN 133
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/57 (43%), Positives = 37/57 (64%)
Frame = +1
Query: 472 QMSQGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHSIXR 642
++S+ D Y+VE NG F +L+VGL +T+ G VFG +K A+DG L +PH+ R
Sbjct: 38 RLSKSD-YSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRR 92
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 47.6 bits (108), Expect = 4e-04
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 278
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 279 DVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 410
+++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 59 NLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +1
Query: 523 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLXVPHSIXRXP 648
G LDVGLA T+G RVF A++G VD GL +PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
Score = 43.2 bits (97), Expect = 0.009
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +3
Query: 144 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 323
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 324 IVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 410
++ + L R+G + + A+Y TG
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 42.3 bits (95), Expect = 0.016
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 162 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 338
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 339 YSHELPRYGVKVGLTNYAAAYSTG 410
L +YGV + N Y G
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVG 81
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 36.7 bits (81), Expect = 0.80
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +3
Query: 165 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 344
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 345 HELPR 359
L +
Sbjct: 61 KTLKK 65
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 35.5 bits (78), Expect = 1.8
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +3
Query: 165 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 344
+R RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S
Sbjct: 8 RRLREEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHS 60
Query: 345 HELPRYGVKVGLTNYAAAYSTG 410
L G K + A+Y TG
Sbjct: 61 RYLASKGWKGSRKSIPASYLTG 82
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 3.2
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +3
Query: 105 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 284
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 285 TCQVA 299
C +A
Sbjct: 161 QCSLA 165
>UniRef50_UPI00006CDDBC Cluster: hypothetical protein TTHERM_00295350;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00295350 - Tetrahymena thermophila SB210
Length = 1346
Score = 34.3 bits (75), Expect = 4.3
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = -1
Query: 269 ETHNQTIFRCVIFVLVLNNEAFTSIIISFPFTTPLE---FYLVPLEVLFVLH---NFNES 108
+T+ I++ VI ++ N+E I PF+ PLE FY P+ V L ++N
Sbjct: 1118 QTNMTQIYKEVIKTIIANSEFDKKSITFEPFSFPLEYVYFYPTPIGVAIKLKLSASWNAG 1177
Query: 107 HILNLSYKVASTD 69
LNLS+K A+ D
Sbjct: 1178 FNLNLSFKNATLD 1190
>UniRef50_Q7RWY4 Cluster: Putative uncharacterized protein
NCU08779.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU08779.1 - Neurospora crassa
Length = 864
Score = 34.3 bits (75), Expect = 4.3
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -1
Query: 602 APFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 486
AP AP T AP AKP+S LN PG +TGS SS
Sbjct: 646 APAPAPSTAAPATTSAKPSS---LNIPGVSTTGSIASSS 681
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,245,776
Number of Sequences: 1657284
Number of extensions: 13996880
Number of successful extensions: 36792
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36745
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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