Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_F03
(904 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0183 - 15522241-15523866 36 0.033
04_01_0445 + 5812277-5813893 35 0.077
04_01_0443 - 5776275-5777921 35 0.077
08_02_1613 + 28236989-28238593 34 0.18
03_01_0354 + 2785998-2787623 33 0.24
10_08_0182 + 15513693-15515273 33 0.41
04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019 33 0.41
03_01_0355 - 2789680-2791263 33 0.41
03_01_0357 - 2797523-2799109 31 0.95
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 30 2.9
03_01_0256 - 1992298-1993878 30 2.9
11_04_0305 - 16162063-16162096,16162282-16164365,16165283-161653... 29 5.1
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428... 29 5.1
07_01_0693 - 5242932-5243213,5245544-5245695,5246267-5246291 29 6.7
04_04_0345 - 24542869-24543540,24543725-24543805,24543845-245439... 29 6.7
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 29 6.7
10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,713... 28 8.8
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 28 8.8
>10_08_0183 - 15522241-15523866
Length = 541
Score = 36.3 bits (80), Expect = 0.033
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 776 AATAXSVFFCGAILGGFIFGWIXDKYGR 859
AA V FCG + G FGW+ DK GR
Sbjct: 74 AAAVNGVAFCGTLAGQLFFGWLGDKLGR 101
>04_01_0445 + 5812277-5813893
Length = 538
Score = 35.1 bits (77), Expect = 0.077
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 776 AATAXSVFFCGAILGGFIFGWIXDKYGR 859
+A V FCG + G FGW+ DK GR
Sbjct: 69 SAAVNGVAFCGTLAGQLFFGWLGDKMGR 96
>04_01_0443 - 5776275-5777921
Length = 548
Score = 35.1 bits (77), Expect = 0.077
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 776 AATAXSVFFCGAILGGFIFGWIXDKYGR 859
+A V FCG + G FGW+ DK GR
Sbjct: 69 SAAVNGVAFCGTLAGQLFFGWLGDKMGR 96
>08_02_1613 + 28236989-28238593
Length = 534
Score = 33.9 bits (74), Expect = 0.18
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 770 HYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
H +A+ V F G + G FGW+ DK GR
Sbjct: 73 HVSASVNGVAFVGTLSGQLFFGWLGDKLGR 102
>03_01_0354 + 2785998-2787623
Length = 541
Score = 33.5 bits (73), Expect = 0.24
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 776 AATAXSVFFCGAILGGFIFGWIXDKYGR 859
AA V CG + G FGW+ DK GR
Sbjct: 72 AAAVNGVALCGTLSGQLFFGWLGDKLGR 99
>10_08_0182 + 15513693-15515273
Length = 526
Score = 32.7 bits (71), Expect = 0.41
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 776 AATAXSVFFCGAILGGFIFGWIXDKYGR 859
+A V CG + G FGW+ DK GR
Sbjct: 70 SAAVNGVALCGTLAGQLFFGWLGDKLGR 97
>04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019
Length = 508
Score = 32.7 bits (71), Expect = 0.41
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 779 ATAXSVFFCGAILGGFIFGWIXDKYGR 859
A + CG + G +FGW+ DK GR
Sbjct: 65 AAVTGIALCGTVPGQLVFGWLGDKMGR 91
>03_01_0355 - 2789680-2791263
Length = 527
Score = 32.7 bits (71), Expect = 0.41
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 776 AATAXSVFFCGAILGGFIFGWIXDKYGR 859
+A V CG + G FGW+ DK GR
Sbjct: 70 SAAVTGVALCGTLAGQLFFGWLGDKLGR 97
>03_01_0357 - 2797523-2799109
Length = 528
Score = 31.5 bits (68), Expect = 0.95
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 776 AATAXSVFFCGAILGGFIFGWIXDKYGR 859
++ V CG + G FGW+ DK GR
Sbjct: 70 SSAVTGVALCGTLAGQLFFGWLGDKLGR 97
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 791 SVFFCGAILGGFIFGWIXDKYGR 859
S+ GAI+G I GW D+YGR
Sbjct: 73 SMAVAGAIIGAAIGGWANDRYGR 95
>03_01_0256 - 1992298-1993878
Length = 526
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 776 AATAXSVFFCGAILGGFIFGWIXDKYGR 859
+A V F G + G FGW+ D+ GR
Sbjct: 70 SAAVNGVAFVGTLTGQLFFGWLGDRVGR 97
>11_04_0305 -
16162063-16162096,16162282-16164365,16165283-16165351,
16168317-16169288,16169548-16169650,16170427-16170509
Length = 1114
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 502 ITPEEHWCSVPELANLSVIERRHLSIPMLNN 594
++P+E+WCS+ EL LS E R L + L N
Sbjct: 747 VSPKENWCSLEELECLS--ELRDLDLNCLEN 775
>04_04_0481 -
25541355-25541849,25541933-25542535,25542730-25542837,
25542925-25543260,25543391-25543461,25543692-25543824
Length = 581
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 782 TAXSVFFCGAILGGFIFGWIXDKYGR 859
T S+ GAI+G GW+ DK+GR
Sbjct: 70 TIVSMAVAGAIVGAGFGGWMNDKFGR 95
>07_01_0693 - 5242932-5243213,5245544-5245695,5246267-5246291
Length = 152
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 586 TSVWIDDVVQSRSS--SLIPAQSTSAPPELW 500
TS W+DD + +L+P STS PE W
Sbjct: 117 TSFWVDDWFPDSGAVANLVPIVSTSVKPEKW 147
>04_04_0345 -
24542869-24543540,24543725-24543805,24543845-24543910,
24543991-24544098,24545101-24545436,24545516-24545586,
24546105-24546252
Length = 493
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 782 TAXSVFFCGAILGGFIFGWIXDKYGR 859
T S+ GAI+G GWI D YGR
Sbjct: 75 TIVSMALVGAIIGAAGGGWINDTYGR 100
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 791 SVFFCGAILGGFIFGWIXDKYGR 859
SV F G ++G +G++ DKYGR
Sbjct: 258 SVVFAGMLIGASGWGFVSDKYGR 280
>10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,
7131375-7131459,7131609-7131771,7132861-7132937,
7133016-7133160,7133236-7133537,7133615-7133720,
7134781-7134935,7135556-7135712,7135799-7135891,
7136232-7136359,7136439-7136696,7136855-7137145,
7137235-7137318,7138335-7138468,7138557-7138784,
7139778-7139958,7140021-7140108,7140268-7140434,
7140750-7141012,7141117-7141120
Length = 1216
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +1
Query: 424 QRMLFLLMIPYAFFFAFVYFGQIFMAITPEEHWCSVPELANLSV 555
++++ L+ + F F ++G + + +TP +H SV A S+
Sbjct: 1073 RKLVLYLIYMFLTFTYFTFYGMVAVGLTPTQHMASVVSSAFYSL 1116
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 716 LMFLMKQLQXSXLGV*QGHYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
L F+++ L+ + G YA + +F G + +G DKYGR
Sbjct: 66 LYFMIRDLKVAKEEQDIGFYAGFVGATYFLGRTISAVPWGIFADKYGR 113
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,279,901
Number of Sequences: 37544
Number of extensions: 467622
Number of successful extensions: 1240
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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