Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_F03
(904 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011) 35 0.10
SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022) 34 0.14
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 33 0.32
SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012) 32 0.73
SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3) 31 1.3
SB_58285| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_55040| Best HMM Match : TatC (HMM E-Value=0.59) 31 1.7
SB_4525| Best HMM Match : Sugar_tr (HMM E-Value=0.028) 31 1.7
SB_31704| Best HMM Match : MFS_1 (HMM E-Value=0.024) 30 2.2
SB_13825| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_17008| Best HMM Match : Galactosyl_T (HMM E-Value=3.6e-30) 29 3.9
SB_11984| Best HMM Match : rve (HMM E-Value=2.3) 29 5.1
SB_15464| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042) 29 6.8
SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034) 29 6.8
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 28 9.0
SB_57349| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_4939| Best HMM Match : 7tm_1 (HMM E-Value=0.049) 28 9.0
>SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011)
Length = 468
Score = 34.7 bits (76), Expect = 0.10
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 770 HYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
H A S FF G ++G + GW D++GR
Sbjct: 112 HKGAAVQSCFFAGMLIGSLVGGWASDRFGR 141
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +1
Query: 373 LKDLDDLLPYMGEFGWYQRMLF----LLMIPYAFFFAFVYF 483
L DD+ Y+ FG YQR L+ LL++P FA + F
Sbjct: 23 LSTFDDVFKYVNSFGCYQRALYVGVNLLIVPIGLQFALLVF 63
>SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 968
Score = 34.7 bits (76), Expect = 0.10
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 770 HYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
H A S FF G ++G + GW D++GR
Sbjct: 625 HKGAAVQSCFFAGMLIGSLVGGWASDRFGR 654
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +1
Query: 373 LKDLDDLLPYMGEFGWYQRMLF----LLMIPYAFFFAFVYF 483
L DD+ ++ FG YQR L+ LL++P FA + F
Sbjct: 536 LSTFDDVFKHVNSFGCYQRALYAGVNLLIVPIGLQFALLVF 576
>SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022)
Length = 453
Score = 34.3 bits (75), Expect = 0.14
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 770 HYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
H A S FF G ++G + GW D++GR
Sbjct: 113 HKGAAVQSCFFAGMLVGSMVGGWASDRFGR 142
Score = 33.5 bits (73), Expect = 0.24
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Frame = +1
Query: 385 DDLLPYMGEFGWYQRMLF----LLMIPYAFFFAFVYF 483
DD+ Y+ FG+YQR+L+ LL++P + FA + F
Sbjct: 28 DDVFQYVNSFGFYQRILYVGVNLLVVPLSLQFALLVF 64
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 33.1 bits (72), Expect = 0.32
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 791 SVFFCGAILGGFIFGWIXDKYGRIXXXWVQCXXIYW 898
S+ F G + G +FG + DKYGR ++ + W
Sbjct: 98 SIMFTGWLFGNIVFGILSDKYGRRKVLFISSCMVCW 133
>SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012)
Length = 466
Score = 31.9 bits (69), Expect = 0.73
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 764 QGHYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
+ + AT SV+F G + G F+ G + D +GR
Sbjct: 106 KAYLGATLQSVYFIGMLFGSFLTGMVSDAWGR 137
>SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3)
Length = 509
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 385 DDLLPYMGEFGWY-QRMLFLLMIPYAFFFAFVYFGQIFMAITPEEHWCSVPEL 540
DD+ ++ FG Y Q M F + F + G +F+ TP H C+ P +
Sbjct: 13 DDIFKHVNSFGRYPQMMYFAFSFGFIFTMEGQFSGLVFLMGTPRFH-CATPNI 64
>SB_58285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 773 YAATAXSVFFCGAILGGFIFGWIXDKYGR 859
+ + SV F G +LG GW+ D+ GR
Sbjct: 105 FQGVSSSVIFAGWLLGAIFIGWLSDRTGR 133
>SB_55040| Best HMM Match : TatC (HMM E-Value=0.59)
Length = 275
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +1
Query: 322 NDLEMVDRKENGANRHRLKDLDDLLPYMGEFGWYQRMLFLLMIPYAFFFAFVYFGQIFMA 501
ND + K N + + DD+ ++ FG YQR L+++ F + +F
Sbjct: 4 NDWAISGLKPNSISTKQ-NHFDDIFAHVRSFGSYQRTLWVVFYFLMFPVCGQFVSVVFAF 62
Query: 502 ITPEEHWCSVPEL 540
TP H C+ P L
Sbjct: 63 GTPRFH-CATPNL 74
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 764 QGHYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
+ + AT S FF G ++G + G I D +GR
Sbjct: 107 RAYLGATLQSCFFAGMLIGSLVSGLISDAWGR 138
>SB_4525| Best HMM Match : Sugar_tr (HMM E-Value=0.028)
Length = 630
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 764 QGHYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
+G+ A+ +VFF G ++G I G + D +GR
Sbjct: 296 RGYIGASLQAVFFAGMMIGSVISGMMADAWGR 327
Score = 28.3 bits (60), Expect = 9.0
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +1
Query: 289 RXTEPTPRDPTNDLEMVDRKENGANRHRLKDLDDLLPYMGEFGWYQRMLFLLMIPYAFFF 468
+ +E P+N E+ D EN A R D+ D ++ FG YQR+L+L+M
Sbjct: 185 KMSETADSAPSNADELGDT-EN-AKMRRYDDIYD--SHVRSFGPYQRVLYLIMKLLIIPI 240
Query: 469 AFVYFGQIFMAITPE 513
+ + +F TPE
Sbjct: 241 SAQFTALVFCLGTPE 255
>SB_31704| Best HMM Match : MFS_1 (HMM E-Value=0.024)
Length = 625
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 779 ATAXSVFFCGAILGGFIFGWIXDKYGR 859
A S+FF G ++G F+ G + D YGR
Sbjct: 89 ALVQSMFFAGMLVGSFVSGPVSDIYGR 115
>SB_13825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 370 RLKDLDDLLPYMGEFGWYQRMLFLLMIPYAFFFAFVYFGQIFMAITP 510
R D DDLL +G FG Y L+ + Q+F A+TP
Sbjct: 32 RAYDFDDLLRLVGGFGRYPAFLYAFTCIMSVPVGLQQLIQVFYAVTP 78
>SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = +1
Query: 418 WYQRMLFLLMIPYAFFFAFVYFGQIFMAITPEEHWCSVP-ELANLSVIERRHLSIPMLNN 594
W I + F F F+Y+ Q F P+EH+ V ++ V L + N
Sbjct: 936 WINHFFTWGSIIFYFIFYFIYYSQFFFNRGPQEHYFGVQFQVFGNPVFWLYLLIAAFVTN 995
Query: 595 KYSKCE-VYDVDWSKLLQDGVRQ 660
S CE + ++ L D VR+
Sbjct: 996 IPSICEKLIRSEYKPTLSDAVRR 1018
>SB_17008| Best HMM Match : Galactosyl_T (HMM E-Value=3.6e-30)
Length = 508
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 685 SWSAILSSADGRHLVTVSTNLHRKLRILNIYCLTSV 578
+W++ L+S + + L S N+ R LNIYCL SV
Sbjct: 137 TWTSTLNSKNLKGLPGRSLNVTSNYRDLNIYCLFSV 172
>SB_11984| Best HMM Match : rve (HMM E-Value=2.3)
Length = 212
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +1
Query: 631 SKLLQDGVRQPNSKWPTKKCQNKWEFNYTDVPYETIATQXAGCVTRTLCRHSSXGVFLWG 810
+K L + QP+ + ++ + +W+FN P E + + G LCR + L+G
Sbjct: 59 AKFLNELYDQPDIRTYCEENRIQWKFNLERAPCEALFEEGVGQCKVELCRDADTVALLFG 118
>SB_15464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = -2
Query: 504 YGHEYLPEVDECEEERVRYHQQEQHALVPTKLSHVRQKVIKIFQSVAIST 355
+G E+ P D+ EEER++ ++ + + TKL + ++ +I++ + I +
Sbjct: 967 FGFEH-PNQDQEEEERLQEKEKNERDNIATKLENQETRINQIYELLQIQS 1015
>SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042)
Length = 277
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 764 QGHYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
+ + +A S++F G + G F+ G + D +GR
Sbjct: 141 RSYISALVQSMYFVGYLFGSFLSGTVSDAFGR 172
>SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034)
Length = 363
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 764 QGHYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
+ + +A S++F G + G F+ G + D +GR
Sbjct: 144 RSYISALVQSMYFVGYLFGSFLSGTVSDAFGR 175
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 764 QGHYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
+ + AAT ++FF G +G + G + D GR
Sbjct: 379 RAYIAATTQAIFFVGMTVGSVLSGMLSDAIGR 410
>SB_57349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 28.3 bits (60), Expect = 9.0
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 364 RHRLKDLDDLLPYMGEFGWYQRMLF----LLMIPYAFFFAFVYFGQIFMAITPEEHWCSV 531
+ R + DD+ ++ FG +QR+L+ LL+IP F + IF TP+ H C V
Sbjct: 7 KDRPPEFDDVFEHVQSFGRFQRILYLCTHLLIIPVMLHFNLM----IFAMGTPQFH-CDV 61
>SB_4939| Best HMM Match : 7tm_1 (HMM E-Value=0.049)
Length = 764
Score = 28.3 bits (60), Expect = 9.0
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +1
Query: 610 EVYDVDWSKLLQDGVRQPNSKWPTKKCQNKWEFNYTDVPYETIAT---QXAGCVTRTLCR 780
E Y+VD +LL+DG+R+ + + FN E +T A + RT+C
Sbjct: 383 ERYEVDPKQLLEDGIRKELVQQVAQALHFGLIFNPKAKQSELSSTPTEYTAFALLRTVCA 442
Query: 781 HSSXGVFLWGHTGWI 825
+ F+ +T WI
Sbjct: 443 FTDFAYFIHCNTYWI 457
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,892,367
Number of Sequences: 59808
Number of extensions: 549836
Number of successful extensions: 1346
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2597949818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -