Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_F03
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 33 0.37
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 33 0.37
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 30 2.6
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 30 2.6
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 30 2.6
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 30 2.6
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 30 2.6
Z79598-5|CAB01863.1| 367|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81524-4|CAB04250.1| 528|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 29 6.0
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 32.7 bits (71), Expect = 0.37
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 779 ATAXSVFFCGAILGGFIFGWIXDKYGR 859
+ A SVF G ++GG GW+ DK GR
Sbjct: 100 SVAVSVFAVGGMIGGLSSGWLADKVGR 126
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 32.7 bits (71), Expect = 0.37
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 779 ATAXSVFFCGAILGGFIFGWIXDKYGR 859
+ A SVF G ++GG GW+ DK GR
Sbjct: 82 SVAVSVFAVGGMIGGLSSGWLADKVGR 108
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 770 HYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
HY + V + G ++G +FG + DKYGR
Sbjct: 83 HYQSFFSLVQYLGVLVGTVLFGTLSDKYGR 112
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 29.9 bits (64), Expect = 2.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 797 FFCGAILGGFIFGWIXDKYGR 859
F+ G+ +G +FG++ DK+GR
Sbjct: 161 FYVGSFIGNCLFGYVADKFGR 181
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 29.9 bits (64), Expect = 2.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 797 FFCGAILGGFIFGWIXDKYGR 859
F+ G+ +G +FG++ DK+GR
Sbjct: 144 FYVGSFIGNCLFGYVADKFGR 164
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 767 GHYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
G AT +V+F G ++G F G + DK GR
Sbjct: 143 GWIRATVQAVYFIGQMIGSFTCGVMADKIGR 173
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 767 GHYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
G AT +V+F G ++G F G + DK GR
Sbjct: 109 GWIRATVQAVYFIGQMIGSFTCGVMADKIGR 139
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 767 GHYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
G AT +V+F G ++G F G + DK GR
Sbjct: 143 GWIRATVQAVYFIGQMIGSFTCGVMADKIGR 173
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 767 GHYAATAXSVFFCGAILGGFIFGWIXDKYGR 859
G AT +V+F G ++G F G + DK GR
Sbjct: 109 GWIRATVQAVYFIGQMIGSFTCGVMADKIGR 139
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 29.9 bits (64), Expect = 2.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 797 FFCGAILGGFIFGWIXDKYGR 859
F+ G+ +G +FG++ DK+GR
Sbjct: 144 FYVGSFIGNCLFGYVADKFGR 164
>Z79598-5|CAB01863.1| 367|Caenorhabditis elegans Hypothetical
protein C44H4.6 protein.
Length = 367
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 676 PTKKCQNKWEFNYTDVPYETI 738
P+K+ KW + Y +PY+TI
Sbjct: 253 PSKEDMAKWNYEYVHIPYDTI 273
>Z81524-4|CAB04250.1| 528|Caenorhabditis elegans Hypothetical
protein F32H5.4 protein.
Length = 528
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 764 QGHYAATAXSVFFCGAILGGFIFGWIXDKYGRI 862
+G + T+ SV G ++G G + D+YGR+
Sbjct: 115 EGAWVKTSISVQMVGVLIGSVTSGAVADRYGRL 147
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 779 ATAXSVFFCGAILGGFIFGWIXDKYGR 859
+ A S+F G + G F G++ DK+GR
Sbjct: 101 SVAVSMFSVGGMFGSFCSGFLADKFGR 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,921,475
Number of Sequences: 27780
Number of extensions: 410234
Number of successful extensions: 1281
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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