Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_F02
         (880 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.57 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   7.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.57
 Identities = 29/93 (31%), Positives = 31/93 (33%), Gaps = 8/93 (8%)
 Frame = +2

Query: 284 TXNXXGPXPPPXFXNWAPEXT-RXXPPLXNXXRKXWGATXP----FF*G-PPLXXGXPTP 445
           T    GP PPP           +  PP  N  R  +    P    F  G P L    P P
Sbjct: 524 TGGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPP 583

Query: 446 XFXXPPPPXXGXPXXPPXG--XGXXMGXXPSXP 538
               PPPP  G P  P  G   G   G  P  P
Sbjct: 584 A--PPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 285 PXXXXGPXPPPIXXIGPPXKP 347
           P     P PPP   +GPP  P
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSP 597


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 24/90 (26%), Positives = 26/90 (28%), Gaps = 5/90 (5%)
 Frame = +2

Query: 308 PPPXFXNWAP---EXTRXXP--PLXNXXRKXWGATXPFF*GPPLXXGXPTPXFXXPPPPX 472
           PPP     AP   +  R  P  P      +  G   P   G P     P P    P PP 
Sbjct: 164 PPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPG 223

Query: 473 XGXPXXPPXGXGXXMGXXPSXPKXGPPXXG 562
              P  P    G   G  P      P   G
Sbjct: 224 VPMPMRPQMPPGAVPGMQPGMQPRPPSAQG 253


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 495 GGXXGXPXXGGGGLXKXGVGXPXXRGG 415
           GG  G    GGG +   G+G     GG
Sbjct: 653 GGGGGGGGGGGGSVGSGGIGSSSLGGG 679



 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -3

Query: 314 GGGGAXXXSXSGXXKSXLGGXPTXGR 237
           GGGG       G   S LGG    GR
Sbjct: 659 GGGGGGSVGSGGIGSSSLGGGGGSGR 684


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,264
Number of Sequences: 2352
Number of extensions: 8449
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)