Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_F02
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 43 3e-04
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 43 3e-04
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 43 3e-04
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 41 0.001
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 41 0.001
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 41 0.001
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 41 0.001
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 39 0.004
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 39 0.004
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 38 0.013
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 38 0.013
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 35 0.088
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 35 0.088
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 33 0.20
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.27
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.4
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.4
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 30 2.5
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 30 2.5
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 30 2.5
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 2.5
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.4
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 4.4
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 5.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.8
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 7.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 43.2 bits (97), Expect = 3e-04
Identities = 32/113 (28%), Positives = 34/113 (30%), Gaps = 2/113 (1%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPPPPXXGX--PXXPPXGXGXXMGXXPSXPKXGPPXXGGXPXXSPQX 589
PP+ G P P PP G P PP G G P P PP G P P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP---PPPGGCPPPPPPPP 776
Query: 590 XGFFXXXXPKXPPXFFXXKKKXFXPXLXPXXKKXPFGGXKKKXXLXPXXFFPR 748
G F P PP P P K G +K PR
Sbjct: 777 PGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFPWGAHTINPR 829
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/75 (33%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXG--PPXXGGXPXXSPQX 589
PP+ G P P PP P PP G G P P G PP GG P P
Sbjct: 707 PPITGGPPPPP-GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Query: 590 XGFFXXXXPKXPPXF 634
G P P F
Sbjct: 766 GGCPPPPPPPPPGGF 780
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 463 PPXXGXPPXPPXXXXXXNGGXPLXPQXGXXXXXGGXXXFPPXXGV 597
PP G PP PP G P P G GG PP G+
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL 751
Score = 30.7 bits (66), Expect = 1.4
Identities = 30/90 (33%), Positives = 30/90 (33%), Gaps = 5/90 (5%)
Frame = +2
Query: 299 GPXPPPXFXNWAPEXTRXXPPLXNXXRKXWGATXPFF*GPPLXXGXP--TPXFXXPPPP- 469
GP PPP P T PP G P GPP P P PPPP
Sbjct: 725 GPPPPPP-PGGLPPITGGPPPPPPP-----GGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Query: 470 --XXGXPXXPPXGXGXXMGXXPSXPKXGPP 553
G P PP G M P P PP
Sbjct: 779 GFKGGPPPPPPPGMFAPMA--PVIPDYLPP 806
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 43.2 bits (97), Expect = 3e-04
Identities = 32/113 (28%), Positives = 34/113 (30%), Gaps = 2/113 (1%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPPPPXXGX--PXXPPXGXGXXMGXXPSXPKXGPPXXGGXPXXSPQX 589
PP+ G P P PP G P PP G G P P PP G P P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP---PPPGGCPPPPPPPP 776
Query: 590 XGFFXXXXPKXPPXFFXXKKKXFXPXLXPXXKKXPFGGXKKKXXLXPXXFFPR 748
G F P PP P P K G +K PR
Sbjct: 777 PGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFPWGAHTINPR 829
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/75 (33%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXG--PPXXGGXPXXSPQX 589
PP+ G P P PP P PP G G P P G PP GG P P
Sbjct: 707 PPITGGPPPPP-GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Query: 590 XGFFXXXXPKXPPXF 634
G P P F
Sbjct: 766 GGCPPPPPPPPPGGF 780
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 463 PPXXGXPPXPPXXXXXXNGGXPLXPQXGXXXXXGGXXXFPPXXGV 597
PP G PP PP G P P G GG PP G+
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL 751
Score = 30.7 bits (66), Expect = 1.4
Identities = 30/90 (33%), Positives = 30/90 (33%), Gaps = 5/90 (5%)
Frame = +2
Query: 299 GPXPPPXFXNWAPEXTRXXPPLXNXXRKXWGATXPFF*GPPLXXGXP--TPXFXXPPPP- 469
GP PPP P T PP G P GPP P P PPPP
Sbjct: 725 GPPPPPP-PGGLPPITGGPPPPPPP-----GGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Query: 470 --XXGXPXXPPXGXGXXMGXXPSXPKXGPP 553
G P PP G M P P PP
Sbjct: 779 GFKGGPPPPPPPGMFAPMA--PVIPDYLPP 806
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 43.2 bits (97), Expect = 3e-04
Identities = 32/113 (28%), Positives = 34/113 (30%), Gaps = 2/113 (1%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPPPPXXGX--PXXPPXGXGXXMGXXPSXPKXGPPXXGGXPXXSPQX 589
PP+ G P P PP G P PP G G P P PP G P P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP---PPPGGCPPPPPPPP 359
Query: 590 XGFFXXXXPKXPPXFFXXKKKXFXPXLXPXXKKXPFGGXKKKXXLXPXXFFPR 748
G F P PP P P K G +K PR
Sbjct: 360 PGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFPWGAHTINPR 412
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/75 (33%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXG--PPXXGGXPXXSPQX 589
PP+ G P P PP P PP G G P P G PP GG P P
Sbjct: 290 PPITGGPPPPP-GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Query: 590 XGFFXXXXPKXPPXF 634
G P P F
Sbjct: 349 GGCPPPPPPPPPGGF 363
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 463 PPXXGXPPXPPXXXXXXNGGXPLXPQXGXXXXXGGXXXFPPXXGV 597
PP G PP PP G P P G GG PP G+
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL 334
Score = 30.7 bits (66), Expect = 1.4
Identities = 30/90 (33%), Positives = 30/90 (33%), Gaps = 5/90 (5%)
Frame = +2
Query: 299 GPXPPPXFXNWAPEXTRXXPPLXNXXRKXWGATXPFF*GPPLXXGXP--TPXFXXPPPP- 469
GP PPP P T PP G P GPP P P PPPP
Sbjct: 308 GPPPPPP-PGGLPPITGGPPPPPPP-----GGLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
Query: 470 --XXGXPXXPPXGXGXXMGXXPSXPKXGPP 553
G P PP G M P P PP
Sbjct: 362 GFKGGPPPPPPPGMFAPMA--PVIPDYLPP 389
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 40.7 bits (91), Expect = 0.001
Identities = 39/134 (29%), Positives = 46/134 (34%), Gaps = 11/134 (8%)
Frame = +2
Query: 227 KGXPSQXSXN-PPXRIXGNPTXNXXGPXPPPXFX---NWAPEXTRXXPPLXNXXRKXWGA 394
+G P Q S PP + P+ G PPP N+AP P +GA
Sbjct: 340 QGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGA 399
Query: 395 TX----PFF*GPPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPS-XPKXG--PP 553
P GPP G P PP G PP G G P+ P G PP
Sbjct: 400 PQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
Query: 554 XXGGXPXXSPQXXG 595
G P +P G
Sbjct: 460 GAAGAPGGNPFARG 473
Score = 37.9 bits (84), Expect = 0.009
Identities = 35/126 (27%), Positives = 41/126 (32%), Gaps = 3/126 (2%)
Frame = +2
Query: 227 KGXPSQXSXNPPXRIX-GNPTXNXXGPXPPPXFXNWAPEXTRXXPPLXNXXRKXWGATXP 403
+G P Q PP G P G PP F +P+ PP + + P
Sbjct: 324 QGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAP--P 381
Query: 404 FF*GPPLXXGXPTPXFXXPPPPXX--GXPXXPPXGXGXXMGXXPSXPKXGPPXXGGXPXX 577
GPP P F P P G PP G G P P+ GP G P
Sbjct: 382 PQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGP--PQGGPGGFGPPPPG 439
Query: 578 SPQXXG 595
P G
Sbjct: 440 GPGAYG 445
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -2
Query: 570 GXPPXXGGPXLGXEGXXPIXXPXPXGGXXGXPXXGGGGLXKXGVGXPXXRGGP 412
G P GGP G G P P G G P G GG G P G P
Sbjct: 398 GAPQGPGGP--GGYGPPPPGGPGAPGSY-GPPQGGPGGFGPPPPGGPGAYGPP 447
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/98 (30%), Positives = 32/98 (32%), Gaps = 3/98 (3%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXGPPXXGGXPXXS---PQ 586
PP P P PPPP G P PP G G P PP G P S PQ
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAG-GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 316
Query: 587 XXGFFXXXXPKXPPXFFXXKKKXFXPXLXPXXKKXPFG 700
G PP ++K P P P G
Sbjct: 317 AGGSPPPAGTGSPPP--PPRQKRQAPERSPPTGSPPTG 352
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/127 (25%), Positives = 36/127 (28%)
Frame = +2
Query: 185 PXSPXGKXXAP*XGKGXPSQXSXNPPXRIXGNPTXNXXGPXPPPXFXNWAPEXTRXXPPL 364
P P G G P + +PP G+P G PPP P PP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 365 XNXXRKXWGATXPFF*GPPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKX 544
R G+ PP G P P PPP P P
Sbjct: 300 PPPPR---GSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPT 356
Query: 545 GPPXXGG 565
G P GG
Sbjct: 357 GRPPRGG 363
Score = 38.7 bits (86), Expect = 0.005
Identities = 33/120 (27%), Positives = 36/120 (30%), Gaps = 3/120 (2%)
Frame = +2
Query: 236 PSQXSXNPPXRIXGNPTXNXXGPXPPPXFXNWAPEXTRXXPPLXNXXRKXWGATXPFF*G 415
P S PP G+P G PPP P PP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-----------------P 274
Query: 416 PPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXG---PPXXGGXPXXSPQ 586
PP P P PPPP G P PP G P+ G PP G P P+
Sbjct: 275 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 334
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 186 PXPPXEXPRHPKXXRGXPPXGRXTPQXGFXXTRPXXXXGPXPPP 317
P P P P RG PP G P P P PPP
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/98 (30%), Positives = 32/98 (32%), Gaps = 3/98 (3%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXGPPXXGGXPXXS---PQ 586
PP P P PPPP G P PP G G P PP G P S PQ
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAG-GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 337
Query: 587 XXGFFXXXXPKXPPXFFXXKKKXFXPXLXPXXKKXPFG 700
G PP ++K P P P G
Sbjct: 338 AGGSPPPAGTGSPPP--PPRQKRQAPERSPPTGSPPTG 373
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/127 (25%), Positives = 36/127 (28%)
Frame = +2
Query: 185 PXSPXGKXXAP*XGKGXPSQXSXNPPXRIXGNPTXNXXGPXPPPXFXNWAPEXTRXXPPL 364
P P G G P + +PP G+P G PPP P PP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 365 XNXXRKXWGATXPFF*GPPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKX 544
R G+ PP G P P PPP P P
Sbjct: 321 PPPPR---GSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPT 377
Query: 545 GPPXXGG 565
G P GG
Sbjct: 378 GRPPRGG 384
Score = 38.7 bits (86), Expect = 0.005
Identities = 33/120 (27%), Positives = 36/120 (30%), Gaps = 3/120 (2%)
Frame = +2
Query: 236 PSQXSXNPPXRIXGNPTXNXXGPXPPPXFXNWAPEXTRXXPPLXNXXRKXWGATXPFF*G 415
P S PP G+P G PPP P PP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-----------------P 295
Query: 416 PPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXG---PPXXGGXPXXSPQ 586
PP P P PPPP G P PP G P+ G PP G P P+
Sbjct: 296 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 355
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 186 PXPPXEXPRHPKXXRGXPPXGRXTPQXGFXXTRPXXXXGPXPPP 317
P P P P RG PP G P P P PPP
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/98 (30%), Positives = 32/98 (32%), Gaps = 3/98 (3%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXGPPXXGGXPXXS---PQ 586
PP P P PPPP G P PP G G P PP G P S PQ
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAG-GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 322
Query: 587 XXGFFXXXXPKXPPXFFXXKKKXFXPXLXPXXKKXPFG 700
G PP ++K P P P G
Sbjct: 323 AGGSPPPAGTGSPPP--PPRQKRQAPERSPPTGSPPTG 358
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/127 (25%), Positives = 36/127 (28%)
Frame = +2
Query: 185 PXSPXGKXXAP*XGKGXPSQXSXNPPXRIXGNPTXNXXGPXPPPXFXNWAPEXTRXXPPL 364
P P G G P + +PP G+P G PPP P PP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 365 XNXXRKXWGATXPFF*GPPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKX 544
R G+ PP G P P PPP P P
Sbjct: 306 PPPPR---GSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPT 362
Query: 545 GPPXXGG 565
G P GG
Sbjct: 363 GRPPRGG 369
Score = 38.7 bits (86), Expect = 0.005
Identities = 33/120 (27%), Positives = 36/120 (30%), Gaps = 3/120 (2%)
Frame = +2
Query: 236 PSQXSXNPPXRIXGNPTXNXXGPXPPPXFXNWAPEXTRXXPPLXNXXRKXWGATXPFF*G 415
P S PP G+P G PPP P PP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-----------------P 280
Query: 416 PPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXG---PPXXGGXPXXSPQ 586
PP P P PPPP G P PP G P+ G PP G P P+
Sbjct: 281 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 340
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 186 PXPPXEXPRHPKXXRGXPPXGRXTPQXGFXXTRPXXXXGPXPPP 317
P P P P RG PP G P P P PPP
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = +2
Query: 458 PPPPXXGXPXXPPXGXGXXMGXXPSXPKXGPPXXGGXPXXSPQXXGFFXXXXPKXPPXF 634
PPPP G PP G M P + GPP GG P P + P PP +
Sbjct: 299 PPPPPPGRTPGPPGMPG--MPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRY 355
Score = 31.9 bits (69), Expect = 0.62
Identities = 33/133 (24%), Positives = 37/133 (27%)
Frame = +3
Query: 186 PXPPXEXPRHPKXXRGXPPXGRXTPQXGFXXTRPXXXXGPXPPPIXXIGPPXKPXXXPXX 365
P PP P P PP TP+ + P PPP GPP P P
Sbjct: 265 PPPPSVTPMPPPM----PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP- 319
Query: 366 LIXXGKXXXXXXXXXXXXXXXXGXQXPXFXXPPPXXGXPPXXPXXGXXXXWGXPPXXPKX 545
G + P PPP PP P G PP P
Sbjct: 320 --PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP----PPRYPSAGPGM---YPPPPPSR 370
Query: 546 XXXXXGGXXXLPP 584
G +PP
Sbjct: 371 PPAPPSGHGMIPP 383
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +2
Query: 413 GPPLXXGXPTPX--FXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXGPPXXGG 565
GPP G P P PP G P PP G G P P P G
Sbjct: 309 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPG 361
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPP-PPXXGXPXXPPXGXGXXMGXXPSXPKXG----PPXXGGXPXXS 580
PP+ P+ PP PP G PP M P P G PP G P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 581 P 583
P
Sbjct: 321 P 321
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = +2
Query: 458 PPPPXXGXPXXPPXGXGXXMGXXPSXPKXGPPXXGGXPXXSPQXXGFFXXXXPKXPPXF 634
PPPP G PP G M P + GPP GG P P + P PP +
Sbjct: 309 PPPPPPGRTPGPPGMPG--MPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRY 365
Score = 31.9 bits (69), Expect = 0.62
Identities = 33/133 (24%), Positives = 37/133 (27%)
Frame = +3
Query: 186 PXPPXEXPRHPKXXRGXPPXGRXTPQXGFXXTRPXXXXGPXPPPIXXIGPPXKPXXXPXX 365
P PP P P PP TP+ + P PPP GPP P P
Sbjct: 275 PPPPSVTPMPPPM----PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP- 329
Query: 366 LIXXGKXXXXXXXXXXXXXXXXGXQXPXFXXPPPXXGXPPXXPXXGXXXXWGXPPXXPKX 545
G + P PPP PP P G PP P
Sbjct: 330 --PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP----PPRYPSAGPGM---YPPPPPSR 380
Query: 546 XXXXXGGXXXLPP 584
G +PP
Sbjct: 381 PPAPPSGHGMIPP 393
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +2
Query: 413 GPPLXXGXPTPX--FXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXGPPXXGG 565
GPP G P P PP G P PP G G P P P G
Sbjct: 319 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPG 371
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPP-PPXXGXPXXPPXGXGXXMGXXPSXPKXG----PPXXGGXPXXS 580
PP+ P+ PP PP G PP M P P G PP G P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 581 P 583
P
Sbjct: 331 P 331
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/65 (35%), Positives = 26/65 (40%)
Frame = -2
Query: 582 GEXXGXPPXXGGPXLGXEGXXPIXXPXPXGGXXGXPXXGGGGLXKXGVGXPXXRGGP*KX 403
G+ G P GGP G + P GG G P GG G G G P GGP
Sbjct: 162 GDPRGPPGGMGGPP----GHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 217
Query: 402 GXVAP 388
G + P
Sbjct: 218 GGMLP 222
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/65 (35%), Positives = 26/65 (40%)
Frame = -2
Query: 582 GEXXGXPPXXGGPXLGXEGXXPIXXPXPXGGXXGXPXXGGGGLXKXGVGXPXXRGGP*KX 403
G+ G P GGP G + P GG G P GG G G G P GGP
Sbjct: 442 GDPRGPPGGMGGPP----GHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 497
Query: 402 GXVAP 388
G + P
Sbjct: 498 GGMLP 502
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 34.7 bits (76), Expect = 0.088
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = +2
Query: 302 PXPPPXFXNWAPEXTRXXPPLXNXXRKXWGATXPFF*GPPLXXGXPTPXFXXPPPPXXGX 481
P PPP F PP G P P + G P P F PPPP
Sbjct: 305 PPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPH--PMMFRGGPYPPFFPPPPPHFMR 362
Query: 482 PXXPPXGXG 508
P PP G
Sbjct: 363 PSSPPTDGG 371
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/71 (32%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Frame = +2
Query: 437 PTPXFXXPPPPXXGXPXXPP--XGXGXXMGXXPSXPKXG-PPXXGGXPXXSPQ--XXGFF 601
P P PPPP P PP G G P P G P G P P G +
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPY 349
Query: 602 XXXXPKXPPXF 634
P PP F
Sbjct: 350 PPFFPPPPPHF 360
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 34.7 bits (76), Expect = 0.088
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = +2
Query: 302 PXPPPXFXNWAPEXTRXXPPLXNXXRKXWGATXPFF*GPPLXXGXPTPXFXXPPPPXXGX 481
P PPP F PP G P P + G P P F PPPP
Sbjct: 305 PPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPH--PMMFRGGPYPPFFPPPPPHFMR 362
Query: 482 PXXPPXGXG 508
P PP G
Sbjct: 363 PSSPPTDGG 371
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/71 (32%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Frame = +2
Query: 437 PTPXFXXPPPPXXGXPXXPP--XGXGXXMGXXPSXPKXG-PPXXGGXPXXSPQ--XXGFF 601
P P PPPP P PP G G P P G P G P P G +
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPY 349
Query: 602 XXXXPKXPPXF 634
P PP F
Sbjct: 350 PPFFPPPPPHF 360
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.20
Identities = 40/138 (28%), Positives = 42/138 (30%), Gaps = 3/138 (2%)
Frame = +2
Query: 230 GXPSQXSXNPPXRIX-GNPTXNXXGPX-PPPXFXNWAPEXTRXXPPLXNXXRKXWG-ATX 400
G P PP I P GP PPP F P P + N +G A
Sbjct: 40 GPPPCFDCPPPAPIFVAPPPPPCFGPACPPPCF---GPACVPLAPIIVNGPPPCFGPACP 96
Query: 401 PFF*GPPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXGPPXXGGXPXXS 580
P GP P P PPP G P PP G GPP G P
Sbjct: 97 PPCFGPAC--APPAPIIVNGPPPCFG-PACPPPCFGPACAPSAPIIVNGPPPCFG-PACP 152
Query: 581 PQXXGFFXXXXPKXPPXF 634
P G P P F
Sbjct: 153 PPCFGPACAPPPPAPILF 170
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 33.1 bits (72), Expect = 0.27
Identities = 39/147 (26%), Positives = 49/147 (33%), Gaps = 7/147 (4%)
Frame = +2
Query: 167 PFKXXLPXSPXGKXXAP*XGKGXPSQXSXN--PPXRIXGNPTXNXX---GPXPPPXFXNW 331
PF+ L P G+ G P + N PP I G P GP PP
Sbjct: 677 PFQHQLTQLP-GQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPM 735
Query: 332 APEXTRXXPPLXNXXRKXWGATXPFF*GPPLXXGXPTPXFXXPPPPXXGXPXXPPXG--X 505
+ + PP+ ++ + A P PP G P PPPP G PP
Sbjct: 736 GFDPNKPPPPMF---QQGFNAGAP---PPPFGRGAG-PMSSFPPPPRGGMHHMPPPPSFR 788
Query: 506 GXXMGXXPSXPKXGPPXXGGXPXXSPQ 586
G G P GG P P+
Sbjct: 789 GGRGGHGGPPPPHFDRRGGGGPPFRPE 815
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPK 541
PP+ G P PPPP G P PP G + P PK
Sbjct: 98 PPMMGGIP------PPPPMFGAPPPPPPPSGLGVAPQPPRPK 133
Score = 32.3 bits (70), Expect = 0.47
Identities = 24/75 (32%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPPPP-XXGXPXXPPXGXGXXMGXXPSXPKXG----PPXXGGXPXXS 580
P P P PPPP G P PP G G P P G PP G P
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAG---GIPPPPPMMGGIPPPPPMFGAPPPP 117
Query: 581 PQXXGFFXXXXPKXP 625
P G P P
Sbjct: 118 PPPSGLGVAPQPPRP 132
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/76 (32%), Positives = 25/76 (32%), Gaps = 6/76 (7%)
Frame = +2
Query: 419 PLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXG------PPXXGGXPXXS 580
P P P F PPP G PP G G G P P PP GG P
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGF-IPPPPGPG---GIPPPPPMFAGGIPPPPPMMGGIPPPP 108
Query: 581 PQXXGFFXXXXPKXPP 628
P F P PP
Sbjct: 109 P----MFGAPPPPPPP 120
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Frame = +2
Query: 440 TPXFXXPPPPXXGXPXXP-PXGXGXXMGXX--PSXPKXGPPXXGGXPXXSPQXXGFFXXX 610
TP PPPP P P G P+ PK PP P SP
Sbjct: 428 TPTRVAPPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSK 487
Query: 611 XPKXPP 628
P PP
Sbjct: 488 SPPPPP 493
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Frame = +2
Query: 440 TPXFXXPPPPXXGXPXXP-PXGXGXXMGXX--PSXPKXGPPXXGGXPXXSPQXXGFFXXX 610
TP PPPP P P G P+ PK PP P SP
Sbjct: 435 TPTRVAPPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSK 494
Query: 611 XPKXPP 628
P PP
Sbjct: 495 SPPPPP 500
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/102 (26%), Positives = 27/102 (26%), Gaps = 1/102 (0%)
Frame = -3
Query: 539 WGXRGXPPXXXXXXXGGXGGXPXXGGGXXKXGXLXXXXKGGAPKKXGXWXPXFSGXN*XX 360
WG G P GG G GGG GG G W G
Sbjct: 40 WGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGG 99
Query: 359 G-XXXGFXRGPNXXNXGGGGAXXXSXSGXXKSXLGGXPTXGR 237
G G N GGGG G GG GR
Sbjct: 100 GRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGR 141
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/72 (27%), Positives = 23/72 (31%)
Frame = -3
Query: 494 GGXGGXPXXGGGXXKXGXLXXXXKGGAPKKXGXWXPXFSGXN*XXGXXXGFXRGPNXXNX 315
GG G GGG G +GG + G W +G G G N
Sbjct: 73 GGGGNWGGNGGGRGDWGGNGGGGRGGGGR--GDWGGNNNGGGGNWGGGGNNDGGWGGNNG 130
Query: 314 GGGGAXXXSXSG 279
GGGG G
Sbjct: 131 GGGGGRGGGGRG 142
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +2
Query: 416 PPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPK 541
P G P P PPPP G P PP G MG + K
Sbjct: 569 PQNLSGAPPPP--PPPPPMLGGPPPPPPPPGGLMGPASNDAK 608
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.9 bits (64), Expect = 2.5
Identities = 28/90 (31%), Positives = 30/90 (33%), Gaps = 5/90 (5%)
Frame = +2
Query: 299 GPXPPPXFXNWAPEXTRXXPPLXNXXRKXW-GATXPFF*GPPLXXGXPTPXFXXPP---P 466
GP PP + N P R PP W GA P G G P F PP P
Sbjct: 83 GPSGPPVYHNQGP--PRGYPPPPPQGADTWRGAPPPAHHG---HFGPPGHHFQGPPQHFP 137
Query: 467 PXXGXPXXP-PXGXGXXMGXXPSXPKXGPP 553
P P P P G P P+ P
Sbjct: 138 PGPPRPHFPGPPGPHRPPEHYPGPPRPQAP 167
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/65 (30%), Positives = 24/65 (36%)
Frame = -2
Query: 495 GGXXGXPXXGGGGLXKXGVGXPXXRGGP*KXGXVAPXXFRXKLXXGGXSRVXSGAQFXKX 316
G G P GG G+ G+G P GGP G P GG R ++
Sbjct: 47 GPGIGGPGLGGPGIGGPGLGGPGVGGGP---GAFGPYGRYGGGGYGGYGRYGRYGRYGGY 103
Query: 315 GGGXG 301
GG G
Sbjct: 104 GGYGG 108
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/65 (30%), Positives = 24/65 (36%)
Frame = -2
Query: 495 GGXXGXPXXGGGGLXKXGVGXPXXRGGP*KXGXVAPXXFRXKLXXGGXSRVXSGAQFXKX 316
G G P GG G+ G+G P GGP G P GG R ++
Sbjct: 47 GPGIGGPGLGGPGIGGPGLGGPGVGGGP---GAFGPYGRYGGGGYGGYGRYGRYGRYGGY 103
Query: 315 GGGXG 301
GG G
Sbjct: 104 GGYGG 108
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.9 bits (64), Expect = 2.5
Identities = 36/145 (24%), Positives = 42/145 (28%), Gaps = 8/145 (5%)
Frame = +2
Query: 185 PXSPXGKXXAP*XGKGXPSQXSX---NPPXRIXGNPTXNXXGPXPP---PXFXNWAPEXT 346
P P G P G P S N R P P PP P + +
Sbjct: 65 PPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNAS 124
Query: 347 RXXPPLXNXXRKXWGATXPFF*GPPLXXGXPTPXFXXPPPPXX--GXPXXPPXGXGXXMG 520
R PP K G+ P G P PPPP G P PP G +
Sbjct: 125 RRPPP----PPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLS 180
Query: 521 XXPSXPKXGPPXXGGXPXXSPQXXG 595
+ + PP G P G
Sbjct: 181 TEGNASRRPPPPPKGTGTPPPPPTG 205
Score = 29.9 bits (64), Expect = 2.5
Identities = 36/144 (25%), Positives = 41/144 (28%), Gaps = 7/144 (4%)
Frame = +2
Query: 185 PXSPXGKXXAP*XGKGXPSQXSX--NPPXRIXGNPTXNXXGPXPP---PXFXNWAPEXTR 349
P P G P G P S N R P P PP P + +R
Sbjct: 128 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASR 187
Query: 350 XXPPLXNXXRKXWGATXPFF*GPPLXXGXPTPXFXXPPPPXX--GXPXXPPXGXGXXMGX 523
PP K G P G P PPPP G P PP G +
Sbjct: 188 RPPP----PPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSG 243
Query: 524 XPSXPKXGPPXXGGXPXXSPQXXG 595
+ + PP G P G
Sbjct: 244 EGNASRRPPPPPKGTGSPPPPPTG 267
Score = 28.3 bits (60), Expect = 7.7
Identities = 35/140 (25%), Positives = 41/140 (29%), Gaps = 7/140 (5%)
Frame = +2
Query: 185 PXSPXGKXXAP*XGKGXPSQXSX--NPPXRIXGNPTXNXXGPXPP---PXFXNWAPEXTR 349
P P G P G P S N R P P PP P + +R
Sbjct: 159 PPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASR 218
Query: 350 XXPPLXNXXRKXWGATXPFF*GPPLXXGXPTPXFXXPPPPXX--GXPXXPPXGXGXXMGX 523
PP K G+ P G P PPPP G P PP G +
Sbjct: 219 RPPP----PPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSG 274
Query: 524 XPSXPKXGPPXXGGXPXXSP 583
+ + PP G P
Sbjct: 275 EGNASRRPPPPPKGTGTPPP 294
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/84 (30%), Positives = 27/84 (32%), Gaps = 4/84 (4%)
Frame = +2
Query: 257 PPXRIXGNPTXNXXGPXPPPXFXNWAPEXTRXXPPLXNXXRKXWGATXPFF*G-PPLXXG 433
PP + N P P P AP P L P G PL G
Sbjct: 475 PPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTG 534
Query: 434 XPTPXFXXPPPP---XXGXPXXPP 496
PTP PPPP G P PP
Sbjct: 535 APTP---PPPPPVGMANGGPPPPP 555
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 413 GPPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXGPPXXGGXPXXSP 583
GPP P P PP P P PP P P PP P P
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 388 GXHXPXFLGAPPXXXXXNXPFXXXPPPXXGXPPXPP 495
G H F+G PP + + PP G PP PP
Sbjct: 67 GPHGMPFMGGPPPHHQYHLQYP--PPHGLGPPPPPP 100
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = +2
Query: 413 GPPLXXGXP--TPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXGPPXXGGXPXXSPQ 586
G P G P +P PPP P PP G G S GPP G P P
Sbjct: 125 GAPGHPGKPPQSPCEPLTPPPCPACPPGPPGAPGAP-GKPGSEGPPGPPGHDG-PNGGPG 182
Query: 587 XXG 595
G
Sbjct: 183 QPG 185
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/72 (27%), Positives = 22/72 (30%)
Frame = +2
Query: 413 GPPLXXGXPTPXFXXPPPPXXGXPXXPPXGXGXXMGXXPSXPKXGPPXXGGXPXXSPQXX 592
GPP G P G P P G G + GPP G P P
Sbjct: 167 GPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPPGPAGGP-GQPGHS 225
Query: 593 GFFXXXXPKXPP 628
G P+ PP
Sbjct: 226 GGAGSPGPQGPP 237
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 412 GAPPXXXXXNXPFXXXPPPXXGXPPXPPXXXXXXNGGXPL 531
G PP N P PPP G P P GG P+
Sbjct: 1466 GGPPPPRGMNSPMRGMPPPMRGGGP-PMRGGPPMRGGPPM 1504
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Frame = +2
Query: 437 PTPXFXXPPPPXXGXPXXP-PXGXGXXMGXXPSXPKXGPPXXGGXPXXSPQXXGFFXXXX 613
P P PP P P P G G P P GPP P G
Sbjct: 700 PPPTSVQPPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYP 759
Query: 614 PKXPP 628
P PP
Sbjct: 760 PGAPP 764
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,945,397
Number of Sequences: 27780
Number of extensions: 283113
Number of successful extensions: 1751
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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