Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_F01
(911 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 43 3e-04
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 39 0.005
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.060
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 34 0.14
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 33 0.24
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.35
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 32 0.56
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 32 0.74
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.74
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 30 2.3
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 30 3.0
SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05) 30 3.0
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 29 3.9
SB_53106| Best HMM Match : PLAT (HMM E-Value=0) 29 5.2
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 29 5.2
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 29 6.9
SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) 28 9.1
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_35622| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_21784| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 28 9.1
SB_5311| Best HMM Match : GnsAB (HMM E-Value=5.6) 28 9.1
SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09) 28 9.1
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = +3
Query: 660 PTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPPXXXPXXXPXXXXXXPXPXX 839
P PP P PS P P P PP P P P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Query: 840 PXPPPXPP 863
P PPP PP
Sbjct: 425 PPPPPPPP 432
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/76 (28%), Positives = 22/76 (28%)
Frame = +3
Query: 657 PPTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPPXXXPXXXPXXXXXXPXPX 836
PP PP P P P S P P PP P P P P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Query: 837 XPXPPPXPPXXXXXPP 884
P PPP PP
Sbjct: 426 PPPPPPPALRLACAPP 441
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = +3
Query: 648 SXXPPTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPPXXXPXXXPXXXXXXP 827
S PP PP P P P P P PP P P P
Sbjct: 364 SPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Query: 828 XPXXPXPPP 854
P P PPP
Sbjct: 424 PPPPPPPPP 432
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/68 (26%), Positives = 18/68 (26%)
Frame = +1
Query: 640 PXXPXXPPLPPXXPXXSXXPXPXXXXXXPXXXXXXXXPXXXXXXXPPPXXPXXXXXXXXX 819
P P PP PP P P P P P PPP P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Query: 820 XXPXPXXP 843
P P P
Sbjct: 425 PPPPPPPP 432
Score = 33.1 bits (72), Expect = 0.32
Identities = 20/82 (24%), Positives = 20/82 (24%)
Frame = +2
Query: 659 PHSPPXTLXXXXXXXPXXXXXLLXPXPXXXXPPXXXPXXPPXXXPXXXSXPXXXPXPXXX 838
P PP P P P PP P PP P P P P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Query: 839 PXSPXXXXXXXXXPPXXXXXXP 904
P P PP P
Sbjct: 427 PPPPPPALRLACAPPRLRFTSP 448
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 771 PXPPXXXPXXXPXXXXXXPXPXX-PXPPPXPPXXXXXPP 884
P PP P P P P P PPP PP PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPP 403
Score = 32.3 bits (70), Expect = 0.56
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +2
Query: 731 PXPXXXXPPXXXPXXPPXXXPXXXSXPXXXPXPXXXPXSPXXXXXXXXXPPXXXXXXP 904
P P PP P PP P P P P P P PP P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +2
Query: 737 PXXXXPPXXXPXXPPXXXPXXXSXPXXXPXPXXXPXSPXXXXXXXXXPPXXXXXXP 904
P PP P PP P P P P P P PP P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/60 (25%), Positives = 16/60 (26%)
Frame = +2
Query: 725 LXPXPXXXXPPXXXPXXPPXXXPXXXSXPXXXPXPXXXPXSPXXXXXXXXXPPXXXXXXP 904
+ P P PP PP P P P P P P PP P
Sbjct: 363 MSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/69 (27%), Positives = 21/69 (30%)
Frame = +3
Query: 657 PPTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPPXXXPXXXPXXXXXXPXPX 836
PP PP P+ P P + P P P P P P
Sbjct: 139 PPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPP 198
Query: 837 XPXPPPXPP 863
P PPP PP
Sbjct: 199 PPPPPPPPP 207
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/95 (23%), Positives = 26/95 (27%), Gaps = 6/95 (6%)
Frame = +3
Query: 618 PXNTTRXSTXSXXPPTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPP----- 782
P + + PP PP P+ P P + P P PP
Sbjct: 113 PPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAP 172
Query: 783 -XXXPXXXPXXXXXXPXPXXPXPPPXPPXXXXXPP 884
P P P PPP PP PP
Sbjct: 173 AATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPP 207
Score = 31.5 bits (68), Expect = 0.98
Identities = 21/76 (27%), Positives = 23/76 (30%)
Frame = +3
Query: 657 PPTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPPXXXPXXXPXXXXXXPXPX 836
PP PP P+ P P + P P PP P P P P
Sbjct: 152 PPPPPIAPATGGPPPPPPIAPAATVP--APAVPLAAASPPPPSGGPPPPP------PPPP 203
Query: 837 XPXPPPXPPXXXXXPP 884
P PPP PP
Sbjct: 204 PPPPPPILELAAPPPP 219
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 38.3 bits (85), Expect = 0.009
Identities = 20/75 (26%), Positives = 22/75 (29%)
Frame = +3
Query: 660 PTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPPXXXPXXXPXXXXXXPXPXX 839
P PP P P+ P + P P PP P P P P
Sbjct: 125 PPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPN 184
Query: 840 PXPPPXPPXXXXXPP 884
P PP P PP
Sbjct: 185 PPYPPPPNPPYPPPP 199
Score = 37.1 bits (82), Expect = 0.020
Identities = 21/76 (27%), Positives = 23/76 (30%)
Frame = +3
Query: 657 PPTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPPXXXPXXXPXXXXXXPXPX 836
PP P P+ P+ P P P PP P P P P
Sbjct: 158 PPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNA-PNPPPPNPPYPPPPN 216
Query: 837 XPXPPPXPPXXXXXPP 884
P PP PP PP
Sbjct: 217 APNPPYPPPPNAPNPP 232
Score = 35.9 bits (79), Expect = 0.045
Identities = 24/101 (23%), Positives = 27/101 (26%)
Frame = +3
Query: 582 WPPKIXAXYXXFPXNTTRXSTXSXXPPTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXX 761
+PP Y P N + P PP P P+ P P
Sbjct: 108 YPPPPNPPYPP-PPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPN 166
Query: 762 XXXPXPPXXXPXXXPXXXXXXPXPXXPXPPPXPPXXXXXPP 884
P P P P P P P PP P PP
Sbjct: 167 PPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPP 207
Score = 35.9 bits (79), Expect = 0.045
Identities = 27/103 (26%), Positives = 30/103 (29%), Gaps = 2/103 (1%)
Frame = +3
Query: 582 WPPKIXAXYXXFPXNTTRXSTXSXXPPTP-PXXPSXXXPSXPXXXXXXSXXPXXXXXXXX 758
+PP Y P S + PP P P P P P + P
Sbjct: 124 YPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPP 183
Query: 759 XXXXPXPPXXXPXXXPXXXXXXPXPXXPXPPPX-PPXXXXXPP 884
P PP P P P P P PPP P PP
Sbjct: 184 NPPYPPPPNP-PYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPP 225
Score = 35.1 bits (77), Expect = 0.079
Identities = 25/105 (23%), Positives = 27/105 (25%), Gaps = 4/105 (3%)
Frame = +3
Query: 582 WPPKIXAXYXXFPXNTTRXSTXSXXPPTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXX 761
+PP Y P + PP P P P P P
Sbjct: 94 YPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPN 153
Query: 762 XXXPXPPXXXPXXXPXXXXXXPXPXXPXPP----PXPPXXXXXPP 884
P P P P P P P PP P PP PP
Sbjct: 154 PPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPP 198
Score = 34.7 bits (76), Expect = 0.10
Identities = 24/101 (23%), Positives = 28/101 (27%)
Frame = +3
Query: 582 WPPKIXAXYXXFPXNTTRXSTXSXXPPTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXX 761
+PP A Y P + PP+P P P+ P P
Sbjct: 116 YPPPPNAPYPPPPNPPYPPPPNAPYPPSP-NAPYPPPPNPPYPPPLYPPPPNPPPPNAPY 174
Query: 762 XXXPXPPXXXPXXXPXXXXXXPXPXXPXPPPXPPXXXXXPP 884
P PP P P P P PP P PP
Sbjct: 175 PPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPP 215
Score = 30.3 bits (65), Expect = 2.3
Identities = 28/116 (24%), Positives = 32/116 (27%), Gaps = 8/116 (6%)
Frame = +3
Query: 561 CRXLMRNW-------PPKIXAXYXXFPXNTTRXSTXSXXPPTPPXXPSXXXPSXPXXXXX 719
C ++ NW P + A P + PP PP P P P
Sbjct: 58 CAWMVNNWSVEHPDAPCLVSAKCGGHPPTNFSPNPPYPPPPYPPYPPPPPYPPPPNP--- 114
Query: 720 XSXXPXXXXXXXXXXXXPXPPXXXPXXXPXXXXXXPXPXXPXP-PPXPPXXXXXPP 884
P P PP P P P P P PP PP PP
Sbjct: 115 ----PYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNA-PYPPPPNPPYPPPLYPPPP 165
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/58 (25%), Positives = 16/58 (27%)
Frame = +2
Query: 731 PXPXXXXPPXXXPXXPPXXXPXXXSXPXXXPXPXXXPXSPXXXXXXXXXPPXXXXXXP 904
P P PP P PP P + P P P P PP P
Sbjct: 147 PYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNP 204
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/82 (21%), Positives = 19/82 (23%)
Frame = +2
Query: 659 PHSPPXTLXXXXXXXPXXXXXLLXPXPXXXXPPXXXPXXPPXXXPXXXSXPXXXPXPXXX 838
P+ PP P P P P P PP P P P
Sbjct: 115 PYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPY 174
Query: 839 PXSPXXXXXXXXXPPXXXXXXP 904
P P PP P
Sbjct: 175 PPPPYPPPPNPPYPPPPNPPYP 196
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/71 (25%), Positives = 18/71 (25%), Gaps = 2/71 (2%)
Frame = +3
Query: 657 PPTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPPXXXPXXXPXXXXXXPX-- 830
PP P P P P P PP P P P
Sbjct: 169 PPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNA 228
Query: 831 PXXPXPPPXPP 863
P P PPP P
Sbjct: 229 PNPPYPPPPNP 239
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 35.5 bits (78), Expect = 0.060
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +3
Query: 660 PTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPPXXXPXXXPXXXXXXPXPXX 839
P PP P PS P + P P P P P P P
Sbjct: 931 PLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSA----PPPGGGAPPLPPPPGGSAPPPPP 986
Query: 840 PXPPPXPP 863
P PPP PP
Sbjct: 987 PPPPPPPP 994
Score = 32.7 bits (71), Expect = 0.42
Identities = 21/79 (26%), Positives = 22/79 (27%)
Frame = +3
Query: 648 SXXPPTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPPXXXPXXXPXXXXXXP 827
S PP PP + P P S P P P P P
Sbjct: 918 SVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPP--PPPGGSAPPPGGGAPPLPP 975
Query: 828 XPXXPXPPPXPPXXXXXPP 884
P PPP PP PP
Sbjct: 976 PPGGSAPPPPPPPPPPPPP 994
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 34.3 bits (75), Expect = 0.14
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 771 PXPPXXXPXXXPXXXXXXPXPXXPXPPPXPPXXXXXP 881
P PP P P P P P PPP PP P
Sbjct: 204 PPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRP 240
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 752 PPXXXPXXPPXXXPXXXSXPXXXPXPXXXPXSP 850
PP P PP P S P P P P P
Sbjct: 208 PPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRP 240
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 33.5 bits (73), Expect = 0.24
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 771 PXPPXXXPXXXPXXXXXXPXPXXPXPPPXPP 863
P PP P P P P P PPP PP
Sbjct: 464 PPPPPPPPPPPPPPPPPPPPPPPPFPPPPPP 494
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 771 PXPPXXXPXXXPXXXXXXPXPXXPXPPPXP 860
P PP P P P P P PPP P
Sbjct: 467 PPPPPPPPPPPPPPPPPPPPPFPPPPPPTP 496
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 792 PXXXPXXXXXXPXPXXPXPPPXPPXXXXXPP 884
P P P P P PPP PP PP
Sbjct: 464 PPPPPPPPPPPPPPPPPPPPPPPPFPPPPPP 494
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 771 PXPPXXXPXXXPXXXXXXPXPXXPXPPPXPP 863
P PP P P P P P PPP P
Sbjct: 466 PPPPPPPPPPPPPPPPPPPPPPFPPPPPPTP 496
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 27.9 bits (59), Expect(2) = 0.35
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 777 PPXXXPXXXPXXXXXXPXPXXPXPPPXPP 863
P P P P P P PPP PP
Sbjct: 88 PTSCAPACPPACCAPPPPPPPPPPPPPPP 116
Score = 23.8 bits (49), Expect(2) = 0.35
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 840 PXPPPXPPXXXXXPP 884
P PPP PP PP
Sbjct: 138 PPPPPPPPPAPCMPP 152
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 32.3 bits (70), Expect = 0.56
Identities = 23/90 (25%), Positives = 23/90 (25%)
Frame = -1
Query: 908 GXXGXXXXXGXXXXXGXXXXGXGXXGXGXXXXXXXXXXXGXXGGGXXXXXXXGXXXXXXX 729
G G G G G G G G G GGG G
Sbjct: 779 GGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGD 838
Query: 728 XGXXXXXXGXGXXXXXGXXGGSGGXXGXCG 639
G G G G GG GG G G
Sbjct: 839 GGGYADGDGGGGGGGGGGGGGGGGGGGGGG 868
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/90 (24%), Positives = 22/90 (24%)
Frame = -1
Query: 908 GXXGXXXXXGXXXXXGXXXXGXGXXGXGXXXXXXXXXXXGXXGGGXXXXXXXGXXXXXXX 729
G G G G G G G G G GGG G
Sbjct: 773 GGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGD 832
Query: 728 XGXXXXXXGXGXXXXXGXXGGSGGXXGXCG 639
G G G GG GG G G
Sbjct: 833 GGGFGDGGGYADGDGGGGGGGGGGGGGGGG 862
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 31.9 bits (69), Expect = 0.74
Identities = 22/82 (26%), Positives = 23/82 (28%)
Frame = +3
Query: 618 PXNTTRXSTXSXXPPTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPPXXXPX 797
P TT +T PT P P P P P P PP P
Sbjct: 133 PAKTTSATTKPVMTPTTPA-PMTLPPISPIDPPRTQPPPIFPIDPPRTQPPPIPPIDPPR 191
Query: 798 XXPXXXXXXPXPXXPXPPPXPP 863
P P PPP PP
Sbjct: 192 TQPPPIPPI-DPPRTQPPPIPP 212
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = +1
Query: 637 DPXXPXXPPLPPXXPXXSXXPXPXXXXXXPXXXXXXXXPXXXXXXXPPPXXP 792
DP PP+PP P + P P P P PPP P
Sbjct: 175 DPPRTQPPPIPPIDPPRT-QPPPIPPIDPPRTQPPPIPPIDPPRTQPPPIFP 225
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.9 bits (69), Expect = 0.74
Identities = 22/89 (24%), Positives = 25/89 (28%), Gaps = 3/89 (3%)
Frame = +3
Query: 627 TTRXSTXSXXPPTP--PXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPPXXXPXX 800
T + +T + PP P P P P P P PP
Sbjct: 900 TPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALP 959
Query: 801 XPXXXXXXPXPXXPX-PPPXPPXXXXXPP 884
P P P P PPP PP P
Sbjct: 960 PPIPATQVPPPPLPPLPPPPPPVQTTTAP 988
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 771 PXPPXXXPXXXPXXXXXXPXPXXPXPPPXP 860
P PP P P P P P PPP P
Sbjct: 1157 PPPPPPPPPPPPSSPSPPPPPPPPPPPPTP 1186
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 771 PXPPXXXPXXXPXXXXXXPXPXXPXPPPXPPXXXXXPP 884
P PP P P P PPP PP PP
Sbjct: 367 PPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPPGRGAPP 404
Score = 29.1 bits (62), Expect = 5.2
Identities = 20/80 (25%), Positives = 20/80 (25%), Gaps = 4/80 (5%)
Frame = +3
Query: 657 PPTPPXXPSXXXPSXPXXXXXX----SXXPXXXXXXXXXXXXPXPPXXXPXXXPXXXXXX 824
PP PP S P P P P P P P
Sbjct: 326 PPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRP 385
Query: 825 PXPXXPXPPPXPPXXXXXPP 884
P PPP PP PP
Sbjct: 386 PSSLGNPPPPPPPGRGAPPP 405
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/67 (26%), Positives = 19/67 (28%)
Frame = +1
Query: 649 PXXPPLPPXXPXXSXXPXPXXXXXXPXXXXXXXXPXXXXXXXPPPXXPXXXXXXXXXXXP 828
P PP PP P + P P P P PP P P
Sbjct: 188 PPTPPAPPSPPIPTAPPTPPMPET-PLPPGSPHIPPAPLHPHIPPAPPNPSKAIATPNPP 246
Query: 829 XPXXPLP 849
P PLP
Sbjct: 247 MPETPLP 253
>SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05)
Length = 288
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 771 PXPPXXXPXXXPXXXXXXPXPXXPXPPPXPPXXXXXPP 884
P PP P P P P PPP P PP
Sbjct: 210 PLPPTAAPPPPPTTGAPPPTPVTNKPPPPRPATTQAPP 247
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/58 (25%), Positives = 16/58 (27%)
Frame = +2
Query: 731 PXPXXXXPPXXXPXXPPXXXPXXXSXPXXXPXPXXXPXSPXXXXXXXXXPPXXXXXXP 904
P P PP P P P + P P P P P PP P
Sbjct: 358 PPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPP 415
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Frame = +3
Query: 771 PXPPXXXPXXXPXXXXXXPXPXXPX-PPPXPPXXXXXPP 884
P PP P P P P P PP PP PP
Sbjct: 347 PPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPP 385
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/63 (26%), Positives = 18/63 (28%)
Frame = +2
Query: 659 PHSPPXTLXXXXXXXPXXXXXLLXPXPXXXXPPXXXPXXPPXXXPXXXSXPXXXPXPXXX 838
P SPP P P P PP P P P + P P P
Sbjct: 354 PPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNG 413
Query: 839 PXS 847
P S
Sbjct: 414 PPS 416
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/74 (28%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Frame = +3
Query: 648 SXXPPTPPXXPSXXXPSXPXXXXXXSXXPXXXXXXXXXXXXPXPPXXXPXXXPXXXXXXP 827
S PP PP P P+ P P P P P P P
Sbjct: 47 SSSPPPPPPSPPAAAPAAPPPPAAAPAAPPP----------PAAPPAAPPPPPPLPAPPP 96
Query: 828 XPXX--PXPPPXPP 863
P P PPP PP
Sbjct: 97 PPAQPAPQPPPAPP 110
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 771 PXPPXXXPXXXPXXXXXXPXPXXPXPPPXPPXXXXXPP 884
P PP P P P P PPP PP PP
Sbjct: 555 PPPPPGVDIPPPLPPSEDPKP--PPPPPEPPEECPPPP 590
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 780 PXXXPXXXPXXXXXXPXPXXPXPPPXPPXXXXXPP 884
P P P P P PPP PP PP
Sbjct: 542 PAVAPAVTPSEEPPPPPPGVDIPPPLPPSEDPKPP 576
>SB_53106| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1790
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 256 LTKSKDAQDFXQGLEGRLRVRAATAQRLRQESPAXRSETRTARPRRL 396
L ++KDA F QG R R+RA +LR + + R +RPR L
Sbjct: 1090 LGENKDAMHFQQGQTDRFRIRAKDVGKLR--TFRVGHDNRGSRPRWL 1134
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 29.1 bits (62), Expect = 5.2
Identities = 22/90 (24%), Positives = 22/90 (24%)
Frame = -1
Query: 908 GXXGXXXXXGXXXXXGXXXXGXGXXGXGXXXXXXXXXXXGXXGGGXXXXXXXGXXXXXXX 729
G G G G G G G G G GGG G
Sbjct: 131 GYGGGRGGGGGYRSGGGYRGGGGYRGGGGGYRGRGRGGGGYGGGGYGGGGYGGGGHGGGG 190
Query: 728 XGXXXXXXGXGXXXXXGXXGGSGGXXGXCG 639
G G G G GG G G G
Sbjct: 191 YGGGGYGGGGGGYGGSGYGGGGGYGGGGYG 220
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Frame = +3
Query: 771 PXPPXXXPXXXPXXXXXXPXPXXPXPPP--XPPXXXXXPP 884
P PP P P P P P PPP PP P
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAP 722
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Frame = +3
Query: 771 PXPPXXX--PXXXPXXXXXXPXPXXPXPPPXPPXXXXXPP 884
P PP P P P P PPP PP PP
Sbjct: 293 PPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPP 332
>SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)
Length = 1136
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 181 APDFFKDIEHHTKEFHKTLXQQFNSLTKSKDAQDFXQGLEGRLRVRAATAQRLRQ 345
A D + HH + K + QQF S KSK F + ++ + +R T++ L +
Sbjct: 425 AEDCDNENTHHQRSHCKNV-QQFLSSDKSKQKFSFIKSMDDKAYIRPGTSEGLEK 478
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 28.3 bits (60), Expect = 9.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 825 PXPXXPXPPPXPPXXXXXPP 884
P P P PPP PP PP
Sbjct: 862 PRPRRPPPPPPPPPPPPPPP 881
>SB_35622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 181 APDFFKDIEHHTKEFHKTLXQQFNSLTKSKDAQDFXQGLEGRLRVRAATAQRLRQ 345
A D + HH + K + QQF S KSK F + ++ + +R T++ L +
Sbjct: 280 AEDCDNENTHHQRSHCKNV-QQFLSSDKSKQKFSFIKSMDDKAYIRPGTSEGLEK 333
>SB_21784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 181 APDFFKDIEHHTKEFHKTLXQQFNSLTKSKDAQDFXQGLEGRLRVRAATAQRLRQ 345
A D + HH + K + QQF S KSK F + ++ + +R T++ L +
Sbjct: 80 AEDCDNENTHHQRSHCKNV-QQFLSSDKSKQKFSFIKSMDDKAYIRPGTSEGLEK 133
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 777 PPXXXPXXXPXXXXXXPXPXXPXPPPXPPXXXXXPP 884
PP P P P P PP PP PP
Sbjct: 475 PPLPLPPELPGSPGDSPPATSPKQPPLPPKHSNGPP 510
>SB_5311| Best HMM Match : GnsAB (HMM E-Value=5.6)
Length = 199
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 181 APDFFKDIEHHTKEFHKTLXQQFNSLTKSKDAQDFXQGLEGRLRVRAATAQRLRQ 345
A D + HH + K + QQF S KSK F + ++ + +R T++ L +
Sbjct: 105 AEDCDNENTHHQRSHCKNV-QQFLSSDKSKQKFSFIKSMDDKAYIRPGTSEGLEK 158
>SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)
Length = 1487
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 181 APDFFKDIEHHTKEFHKTLXQQFNSLTKSKDAQDFXQGLEGRLRVRAATAQRLRQ 345
A D + HH + K + QQF S KSK F + ++ + +R T++ L +
Sbjct: 401 AEDCDNENTHHQRSHCKNV-QQFLSSDKSKQKFSFIKSMDDKAYIRPGTSEGLEK 454
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,893,464
Number of Sequences: 59808
Number of extensions: 311578
Number of successful extensions: 2292
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1532
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2633701421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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