Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E24
         (1052 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1010 + 33477878-33478446,33478709-33478834,33478905-334791...    34   0.16 
05_06_0074 + 25375431-25375631,25375785-25376195,25376474-253765...    33   0.50 
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753...    31   1.2  
05_04_0030 - 17338646-17338669,17338817-17339386                       30   3.5  
01_05_0560 - 23288078-23288370,23288448-23288733                       30   3.5  
04_04_0766 - 27923120-27923554,27923843-27924580,27924815-279248...    29   6.2  
04_03_0092 + 11079185-11079589,11081319-11081409,11081507-110816...    29   8.2  

>02_05_1010 +
           33477878-33478446,33478709-33478834,33478905-33479190,
           33479293-33479484,33479641-33479870,33480379-33480718,
           33481673-33481789,33481940-33482014
          Length = 644

 Score = 34.3 bits (75), Expect = 0.16
 Identities = 23/108 (21%), Positives = 50/108 (46%)
 Frame = +1

Query: 253 VRQVLQTIRFFLRKSTTCSSIQTEGMFAVSPIQKITRRPLNIHIIQLILDLTSRSRATVT 432
           + + +  I  F + ST CS ++    +    ++K + RP+ +     +   T+ +   +T
Sbjct: 399 IHEEIYNIYSFHQSSTLCS-VEFALEYCYFLVEKKSTRPIYLDDFSKLSYCTTLAEMAIT 457

Query: 433 QGTCGFCTLEGNCLFQRFLRFNPKPIYIDMGNRYRRHASDDQEELRQY 576
           +   G+C  + +  F R     P P   D+ +   R+ +DD+ + RQ+
Sbjct: 458 EIRGGYCYQKCHPRF-RHRDMLPPPDSADLSSSRSRYTNDDEHDARQH 504


>05_06_0074 +
           25375431-25375631,25375785-25376195,25376474-25376589,
           25377016-25377064,25377722-25378247,25378339-25379060
          Length = 674

 Score = 32.7 bits (71), Expect = 0.50
 Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
 Frame = -3

Query: 603 IPRNQKVLIILPQFFLIIRRMSSVTVSHINIYWLG--VKXEEALEQ---AVSLEGTKTAG 439
           IP+ +K++ IL   FL      S+T S +N+Y++   +  ++ L+     ++L G+   G
Sbjct: 231 IPQ-KKLIAILYVSFLRSTSPQSLTCSMVNLYYIDHELNIDDFLQDDDYKINLPGSNPDG 289

Query: 438 PLCYGGSRSAGQVQYQLYDVNVQWTPRYFLD 346
           P    G    GQ+++Q Y++ +   P  F+D
Sbjct: 290 PNTMQG---IGQLEHQQYNLPLDLPPNSFVD 317


>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
            18577344-18577458,18578179-18578333,18578673-18580621,
            18580691-18581372,18581550-18581621,18582558-18583199,
            18583301-18583402,18585011-18585100
          Length = 2192

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +3

Query: 249  PRAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHT 389
            P  P T  H I  S +DD+     R  VR   +P+N ++ +  S +T
Sbjct: 2064 PEPPETGTHRIEFSAVDDMDTGSCRSPVRDTPDPDNQKSELSGSGNT 2110


>05_04_0030 - 17338646-17338669,17338817-17339386
          Length = 197

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -3

Query: 594 NQKVLIILPQFFLIIRRMSSVTVSHINIY-WLGVKXEEALEQAVSLEGTKTAGPL 433
           ++ ++ +LPQ+F II  ++ V V    I+ W   K + AL  A++L G    GP+
Sbjct: 55  DRSLMWLLPQWFCIIAAVAMVAVFAAEIFPWCESKGDVAL-CAIALAGALLMGPI 108


>01_05_0560 - 23288078-23288370,23288448-23288733
          Length = 192

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +3

Query: 246 VPRAPSTADHPILPSKIDDVQLDPNRRYVRS 338
           +PR P  A H +L S  DDV  DP+ RYV S
Sbjct: 120 LPR-PLRAGHYVLSSPPDDVDHDPDHRYVFS 149


>04_04_0766 -
           27923120-27923554,27923843-27924580,27924815-27924874,
           27925281-27925328
          Length = 426

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +2

Query: 158 LQATANTAPDNTYSATSWPGTAMAVSR*QCSSCAKYCRPSDSSFENRRRAARS 316
           L  T++ APD   +A +     + V+    SS    CRPS SSF   +R A S
Sbjct: 154 LVPTSSPAPDQAPAAEATDVDDVVVAALDSSSIDGSCRPSPSSFVAWKRTADS 206


>04_03_0092 +
           11079185-11079589,11081319-11081409,11081507-11081612,
           11081694-11081976,11082062-11082210,11083582-11083735,
           11083837-11084793
          Length = 714

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 451 CTLEGNCLFQRFLRFNPK-PIYID 519
           C   G+ LF  FLRFNPK P + D
Sbjct: 84  CAPLGHVLFDEFLRFNPKNPYWFD 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,508,915
Number of Sequences: 37544
Number of extensions: 440693
Number of successful extensions: 1196
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3117811332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)