Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E23
         (967 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   1.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   1.2  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   1.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   1.2  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   1.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   1.2  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   1.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   1.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.6  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   3.6  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 582 NSAWTPTSGLRXPNSFETIPPAERRVXXSRSHTPEPVXS 466
           NS  T +SGL  P S  T PP +     +  +   P  S
Sbjct: 134 NSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASS 172


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 582 NSAWTPTSGLRXPNSFETIPPAERRVXXSRSHTPEPVXS 466
           NS  T +SGL  P S  T PP +     +  +   P  S
Sbjct: 134 NSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 582 NSAWTPTSGLRXPNSFETIPPAERRVXXSRSHTPEPVXS 466
           NS  T +SGL  P S  T PP +     +  +   P  S
Sbjct: 134 NSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 582 NSAWTPTSGLRXPNSFETIPPAERRVXXSRSHTPEPVXS 466
           NS  T +SGL  P S  T PP +     +  +   P  S
Sbjct: 134 NSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 582 NSAWTPTSGLRXPNSFETIPPAERRVXXSRSHTPEPVXS 466
           NS  T +SGL  P S  T PP +     +  +   P  S
Sbjct: 134 NSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 582 NSAWTPTSGLRXPNSFETIPPAERRVXXSRSHTPEPVXS 466
           NS  T +SGL  P S  T PP +     +  +   P  S
Sbjct: 90  NSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 128


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 582 NSAWTPTSGLRXPNSFETIPPAERRVXXSRSHTPEPVXS 466
           NS  T +SGL  P S  T PP +     +  +   P  S
Sbjct: 134 NSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 582 NSAWTPTSGLRXPNSFETIPPAERRVXXSRSHTPEPVXS 466
           NS  T +SGL  P S  T PP +     +  +   P  S
Sbjct: 134 NSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +1

Query: 145 WEDEEGYPVSGQFSK 189
           W++EE  P+ G+F++
Sbjct: 584 WQNEENCPIGGKFAE 598


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 582 NSAWTPTSGLRXPNSFETIPPAE 514
           NS  T +SGL  P S  T PP +
Sbjct: 134 NSNATKSSGLTSPLSVSTSPPGK 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,918
Number of Sequences: 336
Number of extensions: 3842
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27306312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)