Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E22
         (991 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   1.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   1.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   2.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   3.7  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   4.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   8.5  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/37 (32%), Positives = 12/37 (32%)
 Frame = +1

Query: 673 PXPXXXXPXPSXXQPPPPPXLXXPPXXXXPPXXXPPP 783
           P P    P     Q  PP     PP    PP   P P
Sbjct: 45  PDPGSCDPSVGLRQGIPPHHYGGPPSGGQPPQGMPYP 81


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
 Frame = +1

Query: 859 PXPPXPPXPXX--PXPPPPXXPPPPXPP 936
           P P  PP        PP P  PP P PP
Sbjct: 160 PGPALPPTGFLCNNYPPLPQVPPLPLPP 187



 Score = 24.2 bits (50), Expect = 1.6
 Identities = 15/48 (31%), Positives = 16/48 (33%)
 Frame = +2

Query: 779 PPPXXXPPXPPXXXPPPXXXXXXSXPPPXPPXPPXPXXPXXXPPXXPP 922
           P P    P P     PP      + PP  P  PP P  P   P    P
Sbjct: 153 PNPSIIDPGPAL---PPTGFLCNNYPP-LPQVPPLPLPPIFPPTMINP 196



 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/32 (34%), Positives = 11/32 (34%)
 Frame = +2

Query: 626 PXPXXPPXXXXGPPPPPXPXXXPXXXPXXNPP 721
           P P  PP        PP P   P   P   PP
Sbjct: 160 PGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191



 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 711 PTPPXPPXPXPP 746
           P P  PP P PP
Sbjct: 176 PLPQVPPLPLPP 187


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +3

Query: 660 APPPPXXXPXXPXPXPXPTPPXP 728
           +P PP      P P   PTP  P
Sbjct: 44  SPAPPEEEAASPTPGDVPTPSSP 66


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 693 PXPXPXPTPPXPPXPXPPXP 752
           P P P PT      P PP P
Sbjct: 251 PTPKPRPTKVSRRKPRPPRP 270


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3

Query: 920 GGXXGGGGXGXXGXGG 873
           GG  GGG  G  G GG
Sbjct: 92  GGGRGGGRDGDRGDGG 107


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +2

Query: 665 PPPPXPXXXPXXXPXXNPP 721
           PPPP P   P   P    P
Sbjct: 736 PPPPHPHHQPPRNPVGTNP 754


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +2

Query: 665 PPPPXPXXXPXXXPXXNPP 721
           PPPP P   P   P    P
Sbjct: 628 PPPPHPHHQPPRNPVGTNP 646


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 711 PTPPXPPXPXPP 746
           P P  PP P PP
Sbjct: 176 PLPQVPPLPLPP 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,214
Number of Sequences: 336
Number of extensions: 6548
Number of successful extensions: 37
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28133776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)