Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E20
(926 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 149 8e-35
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 141 3e-32
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 126 1e-27
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 123 6e-27
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 113 6e-24
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 102 1e-20
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 99 8e-20
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 98 3e-19
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 95 2e-18
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 85 2e-15
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 81 3e-14
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 65 3e-09
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 60 1e-07
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 54 5e-06
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 53 1e-05
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 52 2e-05
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 52 2e-05
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 50 6e-05
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 50 6e-05
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 47 6e-04
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 45 0.002
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 42 0.030
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 41 0.052
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 39 0.21
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 38 0.48
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.48
UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14; Fungi/M... 37 0.84
UniRef50_Q3HTK5 Cluster: Pherophorin-C2 protein precursor; n=8; ... 36 1.1
UniRef50_Q9LUI1 Cluster: Extensin protein-like; n=10; Magnolioph... 36 1.5
UniRef50_Q4A2U1 Cluster: Putative membrane protein precursor; n=... 35 3.4
UniRef50_P93797 Cluster: Pherophorin-S precursor; n=1; Volvox ca... 35 3.4
UniRef50_Q8L685 Cluster: Pherophorin-dz1 protein precursor; n=1;... 34 5.9
UniRef50_Q00486 Cluster: Mini-collagen precursor; n=2; Hydra sp.... 33 7.8
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 149 bits (362), Expect = 8e-35
Identities = 81/148 (54%), Positives = 90/148 (60%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXGGXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTGXVSIR 246
+TEKAFQK VFL K R +K VGLGFKTPREA EG YIDK CPFTG VSIR
Sbjct: 47 ETEKAFQKQPHVFLASKVSSKKPL-RRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 105
Query: 247 GRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFRXRGXWXXCXXR 426
GRILTGVVQK IVIRRDYLHY+ KYNRFEKR MSV LSPCFR
Sbjct: 106 GRILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVEIGDVVTVG 165
Query: 427 RMQTFVQNS*IQCFESFKGXGLEEVFQK 510
+ + + KG G ++ F+K
Sbjct: 166 ECRPLSKTVRFNVLKVTKGTGAKKAFKK 193
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/46 (54%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Frame = +1
Query: 61 ADQTEKAFQKXAXVFLNRXGG----XKXXXXRHHKXVGLGFKTPRE 186
ADQTE++FQK +FLNR G K R+ + VGLGFKTPRE
Sbjct: 2 ADQTERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 141 bits (341), Expect = 3e-32
Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 5/114 (4%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXG-----GXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTG 231
QTE+A+QK +F N+ K R++K +GLGFKTP+EA EG YIDK CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 232 XVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
VSIRGRIL+GVV K IVIRRDYLHY+ KYNRFEKR MSV LSPCFR
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 46.4 bits (105), Expect = 0.001
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G VT GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 126 bits (303), Expect = 1e-27
Identities = 61/109 (55%), Positives = 71/109 (65%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXGGXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTGXVSIR 246
Q+E+AFQK +F N R +K GLGFKTP+ A EG YIDK CPFTG VSIR
Sbjct: 8 QSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIR 67
Query: 247 GRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
G+ILTG V IVIRR YLHY+PKYNR+EKR + V +SP FR
Sbjct: 68 GKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR 116
Score = 43.2 bits (97), Expect = 0.010
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G VT G+CRP+SKTVRFNV+KV
Sbjct: 117 VQVGDIVTVGQCRPISKTVRFNVVKV 142
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 123 bits (297), Expect = 6e-27
Identities = 59/109 (54%), Positives = 72/109 (66%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXGGXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTGXVSIR 246
Q+E+AFQK +F N K R +K VGLGFKTP EA G Y+DK CPF G VSIR
Sbjct: 8 QSERAFQKQPHIFQN---AKKGAGRRWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIR 64
Query: 247 GRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
GRILTG V I+IRR+YLH++PKYNR+EKR ++ +SP FR
Sbjct: 65 GRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR 113
Score = 42.7 bits (96), Expect = 0.013
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
+ G VT G+CRPLSKTVRFNVL+V
Sbjct: 114 INEGDVVTVGQCRPLSKTVRFNVLRV 139
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 113 bits (272), Expect = 6e-24
Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 3/111 (2%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRX---GGXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTGXV 237
+ ++AFQK +F N R+ K VGLGFK P++A EG YIDK CPFTG V
Sbjct: 34 KNQRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNV 93
Query: 238 SIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCF 390
S+RG IL G+V I+IRRDYLHY+ KYNR+EKR + V +SP F
Sbjct: 94 SVRGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAF 144
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +2
Query: 386 ASGXVEXGXXVTXGECRPLSKTVRFNVLKV 475
A G V+ G V G+CRPLSKTVRFNVLKV
Sbjct: 143 AFGPVKEGDIVVCGQCRPLSKTVRFNVLKV 172
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 102 bits (245), Expect = 1e-20
Identities = 52/99 (52%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Frame = +1
Query: 61 ADQTEKAFQKXAXVFLNRXGGXKXXXX-----RHHKXVGLGFKTPREAXEGXYIDKXCPF 225
A+QTEKAF K VFL+ K R K +GLGFKTPREA EG YIDK CPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 226 TGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNR 342
TG VSIRGRI+ G I++RR+YLH++ KY R
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100
Score = 42.3 bits (95), Expect = 0.017
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G V G+CRPLSKTVRFNVLKV
Sbjct: 142 VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 99 bits (238), Expect = 8e-20
Identities = 45/88 (51%), Positives = 57/88 (64%)
Frame = +1
Query: 127 KXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIR 306
K R+ K +GLGFKTP +A G YID+ CPFT V IRGRIL GVV I+IR
Sbjct: 11 KSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMHRTIIIR 70
Query: 307 RDYLHYLPKYNRFEKRXXXMSVXLSPCF 390
R+YLH++ KY R++KR ++V SP F
Sbjct: 71 RNYLHFIKKYQRYQKRHKSLAVHCSPAF 98
Score = 37.9 bits (84), Expect = 0.36
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 407 GXXVTXGECRPLSKTVRFNVLKV 475
G V G+CRPLSKT+R+NVL+V
Sbjct: 103 GDEVVIGQCRPLSKTIRYNVLEV 125
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 97.9 bits (233), Expect = 3e-19
Identities = 51/111 (45%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXG----GXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTGX 234
QT +QK +F+ + K R+ + VGLG+KTP+ A EG ++D CPFTG
Sbjct: 6 QTGLFYQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGN 65
Query: 235 VSIRGRILTG-VVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSP 384
VSIRGRIL G VV +V+RR+YLHY+ KY R+EKR SV SP
Sbjct: 66 VSIRGRILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSP 116
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G VT GECRPLSKTVRFNVLKV
Sbjct: 120 VKEGDTVTVGECRPLSKTVRFNVLKV 145
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 95.5 bits (227), Expect = 2e-18
Identities = 42/81 (51%), Positives = 50/81 (61%)
Frame = +1
Query: 151 KXVGLGFKTPREAXEGXYIDKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLP 330
K +G+G K P EA Y DK CPF G +SIRGRIL G V ++IRRDYLH++
Sbjct: 25 KNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVIIRRDYLHWIS 84
Query: 331 KYNRFEKRXXXMSVXLSPCFR 393
KY RFEKR + SPCFR
Sbjct: 85 KYKRFEKRHKNIPCHCSPCFR 105
Score = 45.6 bits (103), Expect = 0.002
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +2
Query: 368 PCXCRLASGXVEXGXXVTXGECRPLSKTVRFNVLKV 475
PC C V+ G VT G+CRPLSKT+RFNVL++
Sbjct: 97 PCHCSPCF-RVQEGDLVTIGQCRPLSKTIRFNVLRI 131
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 85.0 bits (201), Expect = 2e-15
Identities = 37/75 (49%), Positives = 47/75 (62%)
Frame = +1
Query: 166 GFKTPREAXEGXYIDKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRF 345
GFK P A YIDK CPFTG V++RGR+ GVV+K IV+ +Y+HY KY R+
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDVNVRGRLFKGVVKKMKAEKTIVVVANYVHYSKKYKRY 97
Query: 346 EKRXXXMSVXLSPCF 390
+R SV +SPCF
Sbjct: 98 SRRHTNFSVHMSPCF 112
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 81.4 bits (192), Expect = 3e-14
Identities = 37/73 (50%), Positives = 46/73 (63%)
Frame = +1
Query: 109 NRXGGXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTGXVSIRGRILTGVVQKXXXX 288
N G R K +GLGFKTPREA +G Y+DK CPFTG VSIRGRIL + +
Sbjct: 31 NLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCEMQ 90
Query: 289 XXIVIRRDYLHYL 327
I++ RDYLH++
Sbjct: 91 STIIVARDYLHFV 103
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 64.9 bits (151), Expect = 3e-09
Identities = 30/59 (50%), Positives = 38/59 (64%)
Frame = +1
Query: 205 IDKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLS 381
IDK CPF G +++RGRIL G V+K ++IR DYL +L KYNRF KR + LS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLS 81
Score = 37.9 bits (84), Expect = 0.36
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2
Query: 407 GXXVTXGECRPLSKTVRFNVLKV 475
G V ECRP+SKTVRFNV+KV
Sbjct: 89 GDIVIIAECRPISKTVRFNVIKV 111
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 59.7 bits (138), Expect = 1e-07
Identities = 30/82 (36%), Positives = 41/82 (50%)
Frame = +1
Query: 142 RHHKXVGLGFKTPREAXEGXYIDKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLH 321
R K +GLG K PR + D CPF G + +RG IL GVV +++ R+Y
Sbjct: 6 RMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREYYR 61
Query: 322 YLPKYNRFEKRXXXMSVXLSPC 387
Y KY R+E+R + PC
Sbjct: 62 YDRKYERWERRRSRIPAHNPPC 83
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 54.0 bits (124), Expect = 5e-06
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +1
Query: 208 DKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPC 387
D+ CPF G + +RG+I+ G + K I++ R+++ Y+ K+ R+EKR + L C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +1
Query: 184 EAXEGXYIDKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXX 363
E E D CP+ G + +RG +L GVV K +V++ YL+Y KYNR+E+R
Sbjct: 16 EPPEKVCSDPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKK 75
Query: 364 MSVXLSPC 387
+ L C
Sbjct: 76 IHAHLPDC 83
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 52.4 bits (120), Expect = 2e-05
Identities = 25/68 (36%), Positives = 35/68 (51%)
Frame = +1
Query: 151 KXVGLGFKTPREAXEGXYIDKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLP 330
+ +GL P E + Y CPF G + +RG+IL G V +VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 331 KYNRFEKR 354
KY R+EKR
Sbjct: 59 KYQRYEKR 66
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +1
Query: 151 KXVGLGFKTPREAXEGXYIDKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLP 330
+ +GL K P E D CP+ G +S+RG++LTG V V+ R+Y Y+P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Query: 331 KYNRFEKRXXXMSVXLSPCFRXR 399
KY R + V + C + +
Sbjct: 60 KYERKATKIKKYHVHVPDCIKIK 82
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 50.4 bits (115), Expect = 6e-05
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +1
Query: 208 DKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPC 387
D CP+ G + +R ++L V+K V+ ++LHY+ KYNR+E+R M V + C
Sbjct: 20 DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIRKYNRYERRRKRMRVRVPEC 79
Query: 388 FRXR 399
+
Sbjct: 80 IEVK 83
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 50.4 bits (115), Expect = 6e-05
Identities = 26/77 (33%), Positives = 38/77 (49%)
Frame = +1
Query: 157 VGLGFKTPREAXEGXYIDKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKY 336
+GL + P E D+ CPF G +S+RG+ L G V +V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEETCA----DQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 337 NRFEKRXXXMSVXLSPC 387
+RF KR + C
Sbjct: 59 DRFMKRRSRVPAHAPDC 75
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 47.2 bits (107), Expect = 6e-04
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +1
Query: 208 DKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPC 387
D CP+ G V +RG IL G V +VI+ ++LHY PKY R+ ++ + L C
Sbjct: 48 DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSPKYKRYIRKRRNIHAHLPSC 106
Query: 388 FR 393
+
Sbjct: 107 IK 108
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 208 DKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPC 387
D CP+ G + +RG++L V+K V +YL+Y KY R+E R V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 41.5 bits (93), Expect = 0.030
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +1
Query: 208 DKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPC 387
DK CP G + +RG G V K + I ++LPKY R+E R ++ L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 388 FR 393
+
Sbjct: 76 LK 77
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 40.7 bits (91), Expect = 0.052
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 151 KXVGL-GFKTPREAXEGXYIDKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYL 327
+ +G+ G K P E D CPF G +S+RG+IL G+V IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 328 PKYNRFEKRXXXMSVXLSPCFRXR 399
KY R ++ + PC +
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCMEAK 81
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 38.7 bits (86), Expect = 0.21
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 151 KXVGLGFKTP-REAXEGXYIDKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYL 327
+ +GL P REA +G DK PF G + IRG++ G + +VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 328 PKYNRFEK 351
K+ R+ +
Sbjct: 60 TKFKRYAR 67
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 37.5 bits (83), Expect = 0.48
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V G VT GEC+PLSKTVRF + KV
Sbjct: 46 VHIGHIVTVGECQPLSKTVRFIMFKV 71
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 37.5 bits (83), Expect = 0.48
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = -3
Query: 351 FLEPIVFG*VVKVIAADHDXXXXXXLLNDAGEDAAADRNVASEGTLLVNVGTLXRLSGSF 172
F ++F V++VI++D+D N G+D +D N SE T VNV T +GSF
Sbjct: 101 FFVSVIFWNVMQVISSDNDGTVHFGGNNSTGQDFTSDGNSTSEWTFFVNVRT---FNGSF 157
>UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14;
Fungi/Metazoa group|Rep: Cytokinesis protein sepA -
Emericella nidulans (Aspergillus nidulans)
Length = 1790
Score = 36.7 bits (81), Expect = 0.84
Identities = 22/74 (29%), Positives = 22/74 (29%), Gaps = 5/74 (6%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXP-----PXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPX 883
PP P PP P P P P P G GP P P
Sbjct: 1041 PPPPPGAGAAPPPPPPPPPPPPGGLGGPPPPPPPPPPGGFGGPPPPPPPPGGFGGPPPPP 1100
Query: 884 XPXPXXXFXXPPPP 925
P P F PPPP
Sbjct: 1101 PPPPGGAFGVPPPP 1114
Score = 33.9 bits (74), Expect = 5.9
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P PP P G GP P P P
Sbjct: 1034 PPPPPPPPPPPPGAGAAPPPPPPPPPP---PPGGLGGPPPPPPPPPPGGFGGPPPPPPPP 1090
Query: 899 XXFXXPPPP 925
F PPPP
Sbjct: 1091 GGFGGPPPP 1099
>UniRef50_Q3HTK5 Cluster: Pherophorin-C2 protein precursor; n=8;
Chlamydomonadales|Rep: Pherophorin-C2 protein precursor
- Chlamydomonas reinhardtii
Length = 853
Score = 36.3 bits (80), Expect = 1.1
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P +P PP P P P P P P
Sbjct: 283 PPPPPSPPPPPPPSPPPPSPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPPPPSPPPPP 342
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 343 PPSPPPPPP 351
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P P P P P P
Sbjct: 237 PPPPPPPSPPPPSPPPPSPPPPPPPSPPPPSPPPPSPPPPPPPSPPPPPPPSPPPPPPPS 296
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 297 PPPPSPPPP 305
Score = 33.9 bits (74), Expect = 5.9
Identities = 18/69 (26%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P +P PP P P P P P P
Sbjct: 340 PPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPPPPSPPPPPPPSPPPPPPPSPP 399
Query: 899 XXFXXPPPP 925
PP P
Sbjct: 400 PPSPPPPSP 408
Score = 33.9 bits (74), Expect = 5.9
Identities = 18/69 (26%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P +P PP P P P P P P
Sbjct: 454 PPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPPPPSPPPPPPPSPPPPPPPSPP 513
Query: 899 XXFXXPPPP 925
PP P
Sbjct: 514 PPSPPPPSP 522
Score = 33.5 bits (73), Expect = 7.8
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P +P PP P P P P P P
Sbjct: 193 PPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPP-PPSPPPPSPPPPPPPSPPPPSPP 251
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 252 PPSPPPPPP 260
>UniRef50_Q9LUI1 Cluster: Extensin protein-like; n=10;
Magnoliophyta|Rep: Extensin protein-like - Arabidopsis
thaliana (Mouse-ear cress)
Length = 470
Score = 35.9 bits (79), Expect = 1.5
Identities = 18/69 (26%), Positives = 20/69 (28%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P + P P P P
Sbjct: 380 PPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPS 439
Query: 899 XXFXXPPPP 925
+ PPPP
Sbjct: 440 PPYVYPPPP 448
>UniRef50_Q4A2U1 Cluster: Putative membrane protein precursor; n=1;
Emiliania huxleyi virus 86|Rep: Putative membrane protein
precursor - Emiliania huxleyi virus 86
Length = 2873
Score = 34.7 bits (76), Expect = 3.4
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P P P P P P
Sbjct: 2672 PPPSPPPSPPPPSPPPSPPPSPPPPSPPPPSPPPPSPPPPSPPPSPPPPSPPPPSPPPPS 2731
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 2732 PPPPSPPPP 2740
>UniRef50_P93797 Cluster: Pherophorin-S precursor; n=1; Volvox
carteri|Rep: Pherophorin-S precursor - Volvox carteri
Length = 599
Score = 34.7 bits (76), Expect = 3.4
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P +P PP P P P P P P
Sbjct: 234 PPPSPPPPPPPPPPSPPPSPPPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPP 293
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 294 PPPPPPPPP 302
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P P P P P P
Sbjct: 228 PPPPPSPPPSPPPPPPPPPPSPPPSPPPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPP 287
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 288 PPPPPPPPP 296
>UniRef50_Q8L685 Cluster: Pherophorin-dz1 protein precursor; n=1;
Volvox carteri f. nagariensis|Rep: Pherophorin-dz1
protein precursor - Volvox carteri f. nagariensis
Length = 1009
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P P P P P P
Sbjct: 211 PPSPPPPPPLPPSPPPPSPPPPPPSPPPPLPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 270
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 271 PPPPPPPPP 279
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P P P P P P
Sbjct: 254 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 313
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 314 PPPPPPPPP 322
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P P P P P P
Sbjct: 297 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 356
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 357 PPPPPPPPP 365
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P P P P P P
Sbjct: 340 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 399
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 400 PPPPPPPPP 408
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P P P P P P
Sbjct: 383 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 442
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 443 PPPPPPPPP 451
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P P P P P P
Sbjct: 426 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 485
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 486 PPPPPPPPP 494
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P P P P P P
Sbjct: 469 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 528
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 529 PPPPPPPPP 537
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P P P P P P
Sbjct: 512 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 571
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 572 PPPPPPPPP 580
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P P P P P P
Sbjct: 555 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 614
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 615 PPPPPPPPP 623
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P P P P P P
Sbjct: 598 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 657
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 658 PPPPPPPPP 666
>UniRef50_Q00486 Cluster: Mini-collagen precursor; n=2; Hydra
sp.|Rep: Mini-collagen precursor - Hydra sp
Length = 186
Score = 33.5 bits (73), Expect = 7.8
Identities = 22/75 (29%), Positives = 22/75 (29%), Gaps = 2/75 (2%)
Frame = +2
Query: 707 CXXXPPXXPXXXXXPPXXXPXXTPXP--PXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXP 880
C PP P PP P P P P P G GP G P P
Sbjct: 72 CMPPPP--PPPPPPPPYPGPPGAPGPMGPPGGPGCPGPQGPPGPPGGPGGPGMPGPPGPP 129
Query: 881 XXPXPXXXFXXPPPP 925
P PPPP
Sbjct: 130 GPPGIPAPPAPPPPP 144
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,034,588
Number of Sequences: 1657284
Number of extensions: 5398124
Number of successful extensions: 15556
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 7471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10789
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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