Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E20
(926 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 110 1e-24
07_03_0920 - 22603868-22603964,22604110-22604222,22604281-226044... 110 1e-24
04_04_1134 + 31137326-31137337,31137964-31138004,31138089-311381... 110 1e-24
04_04_0417 - 25052305-25052398,25052583-25052672,25052740-250529... 109 2e-24
07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955... 102 4e-22
04_04_1135 + 31140032-31140043,31140552-31140592,31140680-311407... 102 4e-22
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.3
07_01_0479 + 3606663-3607448 29 5.2
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 110 bits (265), Expect = 1e-24
Identities = 48/86 (55%), Positives = 59/86 (68%)
Frame = +1
Query: 142 RHHKXVGLGFKTPREAXEGXYIDKXCPFTGXVSIRGRILTGVVQKXXXXXXIVIRRDYLH 321
R K +GLGFKTPREA EG YIDK CPFTG VSIRGRI+ G I++RR+YLH
Sbjct: 25 RFWKNIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLH 84
Query: 322 YLPKYNRFEKRXXXMSVXLSPCFRXR 399
++ KY R+EKR + +SPCFR +
Sbjct: 85 FVKKYQRYEKRHSNIPAHISPCFRVK 110
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G V G+CRPLSKTVRFNV+KV
Sbjct: 109 VKEGDHVIIGQCRPLSKTVRFNVIKV 134
>07_03_0920 -
22603868-22603964,22604110-22604222,22604281-22604429,
22604732-22604832,22604917-22604957,22605584-22605595
Length = 170
Score = 110 bits (265), Expect = 1e-24
Identities = 60/127 (47%), Positives = 73/127 (57%), Gaps = 14/127 (11%)
Frame = +1
Query: 61 ADQTEKAFQKXAXVFLNRXGGXKXXXX-----RHHKXVGLGFKTPREAXEGXYIDKXCPF 225
A+QTEKAF K VFL+ K R K +GLGFKTPREA EG YIDK CPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 226 TGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYN---------RFEKRXXXMSVXL 378
TG VSIRGRI+ G I++RR+YLH++ KY R+EKR + +
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAHV 121
Query: 379 SPCFRXR 399
SPCFR +
Sbjct: 122 SPCFRVK 128
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G V G+CRPLSKTVRFNVLKV
Sbjct: 127 VKEGDHVIIGQCRPLSKTVRFNVLKV 152
>04_04_1134 +
31137326-31137337,31137964-31138004,31138089-31138189,
31138489-31138637,31138696-31138808,31138954-31139050
Length = 170
Score = 110 bits (265), Expect = 1e-24
Identities = 60/127 (47%), Positives = 73/127 (57%), Gaps = 14/127 (11%)
Frame = +1
Query: 61 ADQTEKAFQKXAXVFLNRXGGXKXXXX-----RHHKXVGLGFKTPREAXEGXYIDKXCPF 225
A+QTEKAF K VFL+ K R K +GLGFKTPREA EG YIDK CPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 226 TGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYN---------RFEKRXXXMSVXL 378
TG VSIRGRI+ G I++RR+YLH++ KY R+EKR + +
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAHV 121
Query: 379 SPCFRXR 399
SPCFR +
Sbjct: 122 SPCFRVK 128
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G V G+CRPLSKTVRFNVLKV
Sbjct: 127 VKEGDHVIIGQCRPLSKTVRFNVLKV 152
>04_04_0417 -
25052305-25052398,25052583-25052672,25052740-25052905,
25053547-25053647,25053735-25053775,25054170-25054181
Length = 167
Score = 109 bits (263), Expect = 2e-24
Identities = 60/125 (48%), Positives = 73/125 (58%), Gaps = 12/125 (9%)
Frame = +1
Query: 61 ADQTEKAFQKXAXVFL---NRXGGXKXXXX--RHHKXVGLGFKTPREAXEGXYIDKXCPF 225
A+QTE+AF K VFL G K R K +GLGFKTPREA EG YIDK CPF
Sbjct: 2 AEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCPF 61
Query: 226 TGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNR-------FEKRXXXMSVXLSP 384
TG VSIRGRI+ G I++RR+YLH++ KY R +EKR + +SP
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHISP 121
Query: 385 CFRXR 399
CFR +
Sbjct: 122 CFRVK 126
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G V G+CRPLSKTVRFNVLKV
Sbjct: 125 VKEGDHVIIGQCRPLSKTVRFNVLKV 150
>07_03_0919 -
22594980-22595111,22595398-22595427,22595522-22595587,
22596021-22596107,22596868-22596921,22597696-22597762,
22598099-22598215,22598536-22598637,22598784-22598902,
22598966-22599049,22599220-22599354,22599470-22599505,
22599581-22599700,22600557-22600645,22601507-22601596,
22601629-22601802,22602135-22602235,22602323-22602363,
22602872-22602883
Length = 551
Score = 102 bits (245), Expect = 4e-22
Identities = 52/99 (52%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Frame = +1
Query: 61 ADQTEKAFQKXAXVFLNRXGGXKXXXX-----RHHKXVGLGFKTPREAXEGXYIDKXCPF 225
A+QTEKAF K VFL+ K R K +GLGFKTPREA EG YIDK CPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 226 TGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNR 342
TG VSIRGRI+ G I++RR+YLH++ KY R
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100
>04_04_1135 +
31140032-31140043,31140552-31140592,31140680-31140780,
31141113-31141419,31141565-31141661
Length = 185
Score = 102 bits (245), Expect = 4e-22
Identities = 52/99 (52%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Frame = +1
Query: 61 ADQTEKAFQKXAXVFLNRXGGXKXXXX-----RHHKXVGLGFKTPREAXEGXYIDKXCPF 225
A+QTEKAF K VFL+ K R K +GLGFKTPREA EG YIDK CPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 226 TGXVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNR 342
TG VSIRGRI+ G I++RR+YLH++ KY R
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G V G+CRPLSKTVRFNVLKV
Sbjct: 142 VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
PP P PP P P PP P G P P P P
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPP-----PKGPPPPPPAKGPPPPPPPKGPSPPPPPPPG 371
Query: 899 XXFXXPPPP 925
PPPP
Sbjct: 372 GKKGGPPPP 380
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/70 (27%), Positives = 19/70 (27%), Gaps = 1/70 (1%)
Frame = +2
Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXP-XXPXXPXP 895
PP P PP P PP F GP P P P P
Sbjct: 180 PPQMPIPFQRPPGVPPAFPGGPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPP 239
Query: 896 XXXFXXPPPP 925
PPPP
Sbjct: 240 PFRPGMPPPP 249
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,685,153
Number of Sequences: 37544
Number of extensions: 175199
Number of successful extensions: 547
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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