Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E20
(926 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 141 4e-33
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 141 4e-33
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 141 4e-33
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 141 4e-33
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 141 4e-33
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 141 4e-33
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 141 4e-33
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 141 4e-33
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 141 4e-33
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 64 9e-10
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 141 bits (341), Expect = 4e-33
Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 5/114 (4%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXG-----GXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTG 231
QTE+A+QK +F N+ K R++K +GLGFKTP+EA EG YIDK CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 232 XVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
VSIRGRIL+GVV K IVIRRDYLHY+ KYNRFEKR MSV LSPCFR
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G VT GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 141 bits (341), Expect = 4e-33
Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 5/114 (4%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXG-----GXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTG 231
QTE+A+QK +F N+ K R++K +GLGFKTP+EA EG YIDK CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 232 XVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
VSIRGRIL+GVV K IVIRRDYLHY+ KYNRFEKR MSV LSPCFR
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G VT GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 141 bits (341), Expect = 4e-33
Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 5/114 (4%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXG-----GXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTG 231
QTE+A+QK +F N+ K R++K +GLGFKTP+EA EG YIDK CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 232 XVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
VSIRGRIL+GVV K IVIRRDYLHY+ KYNRFEKR MSV LSPCFR
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G VT GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 141 bits (341), Expect = 4e-33
Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 5/114 (4%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXG-----GXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTG 231
QTE+A+QK +F N+ K R++K +GLGFKTP+EA EG YIDK CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 232 XVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
VSIRGRIL+GVV K IVIRRDYLHY+ KYNRFEKR MSV LSPCFR
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G VT GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 141 bits (341), Expect = 4e-33
Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 5/114 (4%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXG-----GXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTG 231
QTE+A+QK +F N+ K R++K +GLGFKTP+EA EG YIDK CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 232 XVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
VSIRGRIL+GVV K IVIRRDYLHY+ KYNRFEKR MSV LSPCFR
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G VT GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 141 bits (341), Expect = 4e-33
Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 5/114 (4%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXG-----GXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTG 231
QTE+A+QK +F N+ K R++K +GLGFKTP+EA EG YIDK CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 232 XVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
VSIRGRIL+GVV K IVIRRDYLHY+ KYNRFEKR MSV LSPCFR
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G VT GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 141 bits (341), Expect = 4e-33
Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 5/114 (4%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXG-----GXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTG 231
QTE+A+QK +F N+ K R++K +GLGFKTP+EA EG YIDK CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 232 XVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
VSIRGRIL+GVV K IVIRRDYLHY+ KYNRFEKR MSV LSPCFR
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G VT GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 141 bits (341), Expect = 4e-33
Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 5/114 (4%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXG-----GXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTG 231
QTE+A+QK +F N+ K R++K +GLGFKTP+EA EG YIDK CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 232 XVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
VSIRGRIL+GVV K IVIRRDYLHY+ KYNRFEKR MSV LSPCFR
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G VT GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 141 bits (341), Expect = 4e-33
Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 5/114 (4%)
Frame = +1
Query: 67 QTEKAFQKXAXVFLNRXG-----GXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTG 231
QTE+A+QK +F N+ K R++K +GLGFKTP+EA EG YIDK CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 232 XVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
VSIRGRIL+GVV K IVIRRDYLHY+ KYNRFEKR MSV LSPCFR
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G VT GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 63.7 bits (148), Expect = 9e-10
Identities = 30/43 (69%), Positives = 31/43 (72%)
Frame = +1
Query: 265 VVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
VV K IVIRRDYLHY+ KYNRFEKR MSV LSPCFR
Sbjct: 1 VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 43
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
V+ G VT GECRPLSKTVRFNVLKV
Sbjct: 45 VQIGDIVTVGECRPLSKTVRFNVLKV 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,167,595
Number of Sequences: 237096
Number of extensions: 937451
Number of successful extensions: 6192
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5629
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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