Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E20
         (926 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   134   2e-31
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   134   2e-31
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   120   2e-27

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  134 bits (323), Expect = 2e-31
 Identities = 70/114 (61%), Positives = 78/114 (68%), Gaps = 3/114 (2%)
 Frame = +1

Query: 61  ADQTEKAFQKXAXVFLNRX---GGXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTG 231
           ADQ E+AFQK   V LNR    G  K    R  + VGLGFKTPREA +G YIDK CP+TG
Sbjct: 2   ADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTG 61

Query: 232 XVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
            V IRGRILTGVV+K      IVIRRDYLH++ KY+RFEKR   MSV  SP FR
Sbjct: 62  DVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFR 115



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 22/26 (84%), Positives = 22/26 (84%)
 Frame = +2

Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
           VE G  VT GECRPLSKTVRFNVLKV
Sbjct: 117 VEHGDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  134 bits (323), Expect = 2e-31
 Identities = 70/114 (61%), Positives = 78/114 (68%), Gaps = 3/114 (2%)
 Frame = +1

Query: 61  ADQTEKAFQKXAXVFLNRX---GGXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTG 231
           ADQ E+AFQK   V LNR    G  K    R  + VGLGFKTPREA +G YIDK CP+TG
Sbjct: 2   ADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTG 61

Query: 232 XVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
            V IRGRILTGVV+K      IVIRRDYLH++ KY+RFEKR   MSV  SP FR
Sbjct: 62  DVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFR 115



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 22/26 (84%), Positives = 22/26 (84%)
 Frame = +2

Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
           VE G  VT GECRPLSKTVRFNVLKV
Sbjct: 117 VEHGDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  120 bits (290), Expect = 2e-27
 Identities = 60/110 (54%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
 Frame = +1

Query: 67  QTEKAFQKX-AXVFLNRXGGXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTGXVSI 243
           QTE++F+K  A V + R         R ++ +GLGF+ P EA +G YIDK CP+TG V I
Sbjct: 5   QTERSFRKQHAVVVVRRKSPNLKKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTGDVRI 64

Query: 244 RGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
           RGRILTGVV+K      IVIRRDYLH++ KY+RFEKR   MSV  SP FR
Sbjct: 65  RGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFR 114



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 22/26 (84%), Positives = 22/26 (84%)
 Frame = +2

Query: 398 VEXGXXVTXGECRPLSKTVRFNVLKV 475
           VE G  VT GECRPLSKTVRFNVLKV
Sbjct: 116 VEHGDIVTIGECRPLSKTVRFNVLKV 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,252,438
Number of Sequences: 53049
Number of extensions: 274372
Number of successful extensions: 730
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)