Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E20
         (926 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73426-1|CAA97792.1|  155|Caenorhabditis elegans Hypothetical pr...   114   1e-25
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    29   4.7  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    29   4.7  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    29   4.7  

>Z73426-1|CAA97792.1|  155|Caenorhabditis elegans Hypothetical
           protein F40F11.1 protein.
          Length = 155

 Score =  114 bits (274), Expect = 1e-25
 Identities = 59/114 (51%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
 Frame = +1

Query: 61  ADQTEKAFQKXAXVFLN---RXGGXKXXXXRHHKXVGLGFKTPREAXEGXYIDKXCPFTG 231
           ++QTE+AF K   V LN   R         R+ + VGLGFK PR+A EG YIDK CP+ G
Sbjct: 2   SEQTERAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPRDAVEGTYIDKKCPWAG 61

Query: 232 XVSIRGRILTGVVQKXXXXXXIVIRRDYLHYLPKYNRFEKRXXXMSVXLSPCFR 393
            V IRG ILTGVV K      IV+RRDYLHY+ KY R+EKR   +    SP FR
Sbjct: 62  NVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAHCSPAFR 115



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 23/36 (63%), Positives = 24/36 (66%)
 Frame = +2

Query: 368 PCXCRLASGXVEXGXXVTXGECRPLSKTVRFNVLKV 475
           P  C  A   +  G  VT GECRPLSKTVRFNVLKV
Sbjct: 107 PAHCSPAFRDIHPGDLVTIGECRPLSKTVRFNVLKV 142


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 19/69 (27%), Positives = 19/69 (27%)
 Frame = +2

Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
           PP  P     PP       P PP   P          P  G         P  P  P P 
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG-------GCPPPPPPPPPG 778

Query: 899 XXFXXPPPP 925
                PPPP
Sbjct: 779 GFKGGPPPP 787


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 19/69 (27%), Positives = 19/69 (27%)
 Frame = +2

Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
           PP  P     PP       P PP   P          P  G         P  P  P P 
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG-------GCPPPPPPPPPG 778

Query: 899 XXFXXPPPP 925
                PPPP
Sbjct: 779 GFKGGPPPP 787


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 19/69 (27%), Positives = 19/69 (27%)
 Frame = +2

Query: 719 PPXXPXXXXXPPXXXPXXTPXPPXXXPXFXXXXGXXGPXXGXXXXXXXXXPXXPXXPXPX 898
           PP  P     PP       P PP   P          P  G         P  P  P P 
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG-------GCPPPPPPPPPG 361

Query: 899 XXFXXPPPP 925
                PPPP
Sbjct: 362 GFKGGPPPP 370


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,879,859
Number of Sequences: 27780
Number of extensions: 127501
Number of successful extensions: 306
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)