Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E19
         (866 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2014| Best HMM Match : MAM (HMM E-Value=0)                          33   0.23 
SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073)            28   8.6  
SB_51144| Best HMM Match : Sugar_tr (HMM E-Value=0.13)                 28   8.6  

>SB_2014| Best HMM Match : MAM (HMM E-Value=0)
          Length = 2282

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 374  FSXWXRHGLDLPSQSASHGRRXXIERPRHGDGSILDGVHHVH 499
            F+ W RHG +  +  + HG      R RHG  +    + H H
Sbjct: 1389 FTTWSRHGYNTTTTRSQHGHDTAAVRSRHGHNTFTTRLRHGH 1430


>SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073)
          Length = 582

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +3

Query: 474 SWMASIMFIFA-PIAVFIYGIAADKFGR 554
           +WMA+ M  F   I     GI ADK+GR
Sbjct: 408 AWMANSMLFFGWAIGAIFLGIIADKYGR 435


>SB_51144| Best HMM Match : Sugar_tr (HMM E-Value=0.13)
          Length = 371

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 474 SWMASIMFIFA-PIAVFIYGIAADKFGRKNXPSLLLYSDCC 593
           +W+A+ M  F   +   I G+ ADK+GR+   S+L  S  C
Sbjct: 119 AWLANSMLFFGWALGAIILGMIADKYGRR---SVLFPSAAC 156


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,115,275
Number of Sequences: 59808
Number of extensions: 310717
Number of successful extensions: 756
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2479240863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)