Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E18
(964 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.026
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.10
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 31 0.18
SPAC23C11.01 |||ER membrane protein, ICE2 family|Schizosaccharom... 28 1.7
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 2.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.0
SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 3.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.0
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 5.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 9.1
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 9.1
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.3 bits (75), Expect = 0.026
Identities = 27/103 (26%), Positives = 30/103 (29%), Gaps = 3/103 (2%)
Frame = +3
Query: 660 PPPXPXXXPXXXFPXXXPSL---SXXAPSXPXXXXXXXXXXPXTPXXXXXXXXXLPXPTX 830
P P P P P P + S APS P P P P
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPA---------PSGAP 1083
Query: 831 PTXLPXXPPPXPPXTXXXPPXXSPSFSXPPXXXXXXXAXPPXP 959
P P PP P + PP PS + PP P P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 34.3 bits (75), Expect = 0.026
Identities = 22/84 (26%), Positives = 24/84 (28%)
Frame = +2
Query: 644 PPXXXPPPXPPXXXPXXXSPGXAFPFXXXPXPPPXXXSTXXXXPXHTXXXXXPXXXPPXP 823
PP P PP P +P P P P P + P P P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP-P 1170
Query: 824 NXXHXSXXXPXPXPPXHXXPSPXP 895
S P P P P P P
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 31.5 bits (68), Expect = 0.18
Identities = 22/99 (22%), Positives = 25/99 (25%)
Frame = +1
Query: 655 PPPPXXPXXXPXXXFPXXGLPFLXXPXPXPXXXXXXXXXXXXHPPTTXXXXXXSXPQXXP 834
PP P P P G+P + P P PP+T P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 835 XXXPXPXPPPPXXXPXXPPXXXLPFLXXPXPGGXXPPXP 951
P PP P P P P P P
Sbjct: 1229 VPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 29.9 bits (64), Expect = 0.56
Identities = 28/115 (24%), Positives = 32/115 (27%), Gaps = 11/115 (9%)
Frame = +3
Query: 648 PXXXPP-PXPXXXPXXXFPXXX----PSLSXXAPSXPXXXXXXXXXXPXT---PXXXXXX 803
P PP P P P P P S P P P P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Query: 804 XXXLPXPTX---PTXLPXXPPPXPPXTXXXPPXXSPSFSXPPXXXXXXXAXPPXP 959
+P P+ P P PP P + PP +PS PP P P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 29.1 bits (62), Expect = 0.98
Identities = 20/83 (24%), Positives = 21/83 (25%)
Frame = +2
Query: 647 PXXXPPPXPPXXXPXXXSPGXAFPFXXXPXPPPXXXSTXXXXPXHTXXXXXPXXXPPXPN 826
P PP P P P P P P P P PP P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK 1096
Query: 827 XXHXSXXXPXPXPPXHXXPSPXP 895
+ P P P P P P
Sbjct: 1097 PSVAA--PPVPKPSVAVPPVPAP 1117
Score = 27.9 bits (59), Expect = 2.3
Identities = 24/104 (23%), Positives = 27/104 (25%)
Frame = +3
Query: 648 PXXXPPPXPXXXPXXXFPXXXPSLSXXAPSXPXXXXXXXXXXPXTPXXXXXXXXXLPXPT 827
P PP P P P PS++ P P P P
Sbjct: 1126 PSVAAPPVPV--PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 828 XPTXLPXXPPPXPPXTXXXPPXXSPSFSXPPXXXXXXXAXPPXP 959
+P PPP PP PS PP P P
Sbjct: 1184 PAAGVPPVPPPSEA-----PPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.1 bits (57), Expect = 3.9
Identities = 32/121 (26%), Positives = 34/121 (28%), Gaps = 17/121 (14%)
Frame = +3
Query: 648 PXXXPPPXPXXXPXXXFPXXX-------PSLSXXAPSXPXXXXXXXXXX-PXTPXXXXXX 803
P PP P P P P LS AP P P T
Sbjct: 987 PKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIP 1046
Query: 804 XXXLPXPTXPTXLPXXPPPXP---------PXTXXXPPXXSPSFSXPPXXXXXXXAXPPX 956
P P + P PPP P P PP +PS PP A PP
Sbjct: 1047 TSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPS-GIPP-VPKPSVAAPPV 1104
Query: 957 P 959
P
Sbjct: 1105 P 1105
Score = 26.6 bits (56), Expect = 5.2
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 2/86 (2%)
Frame = +2
Query: 644 PPXXXPPPXPPXXXPXXXSPGXAFPFXXXP-XPPPXXXSTXXXXPXHTXXXXXPXXXPPX 820
P PP PP P P P P PP + P P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPV--PA 1241
Query: 821 PNXXHXSXXXP-XPXPPXHXXPSPXP 895
P+ S P P H SP P
Sbjct: 1242 PSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 25.8 bits (54), Expect = 9.1
Identities = 21/85 (24%), Positives = 22/85 (25%), Gaps = 1/85 (1%)
Frame = +2
Query: 644 PPXXXPPPXPPXXXPXXXSPGXAFP-FXXXPXPPPXXXSTXXXXPXHTXXXXXPXXXPPX 820
PP P PP P +P P P P P P PP
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 821 PNXXHXSXXXPXPXPPXHXXPSPXP 895
P S P P P P P
Sbjct: 1143 PK---PSVAAPPVPAPSGAPPVPKP 1164
Score = 25.8 bits (54), Expect = 9.1
Identities = 24/104 (23%), Positives = 29/104 (27%)
Frame = +3
Query: 648 PXXXPPPXPXXXPXXXFPXXXPSLSXXAPSXPXXXXXXXXXXPXTPXXXXXXXXXLPXPT 827
P PP P P P PS++ AP P P P
Sbjct: 1107 PSVAVPPVPA--PSGAPPVPKPSVA--APPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Query: 828 XPTXLPXXPPPXPPXTXXXPPXXSPSFSXPPXXXXXXXAXPPXP 959
P+ PP P + PP P+ PP P P
Sbjct: 1163 KPSVAA---PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.10
Identities = 27/101 (26%), Positives = 31/101 (30%), Gaps = 1/101 (0%)
Frame = +3
Query: 660 PPPXPXXXPXXXFPXXXPSL-SXXAPSXPXXXXXXXXXXPXTPXXXXXXXXXLPXPTXPT 836
PPP P P++ AP+ P P P LP P+ P
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS-----LP-PSAPP 429
Query: 837 XLPXXPPPXPPXTXXXPPXXSPSFSXPPXXXXXXXAXPPXP 959
LP PP P P PS P A PP P
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 29.9 bits (64), Expect = 0.56
Identities = 25/90 (27%), Positives = 30/90 (33%)
Frame = +3
Query: 648 PXXXPPPXPXXXPXXXFPXXXPSLSXXAPSXPXXXXXXXXXXPXTPXXXXXXXXXLPXPT 827
P PP P P P PSL AP+ P P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP-------PSAPIA----------PP 458
Query: 828 XPTXLPXXPPPXPPXTXXXPPXXSPSFSXP 917
P +P PP PP PP +P+ + P
Sbjct: 459 LPAGMPAAPP-LPPAAPAPPPAPAPAPAAP 487
Score = 26.2 bits (55), Expect = 6.9
Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = +3
Query: 663 PPXPXXXPXXXFPXXXPSLSXXA-PSXPXXXXXXXXXXPXTPXXXXXXXXXLPXPTXPTX 839
PP P P P PSLS A P P P +P P T
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP-AINSTS 288
Query: 840 LPXXPPP 860
P PPP
Sbjct: 289 KPPLPPP 295
Score = 26.2 bits (55), Expect = 6.9
Identities = 19/78 (24%), Positives = 22/78 (28%)
Frame = +2
Query: 662 PPXPPXXXPXXXSPGXAFPFXXXPXPPPXXXSTXXXXPXHTXXXXXPXXXPPXPNXXHXS 841
PP PP + A P PPP P PP P + +
Sbjct: 290 PPLPPPSS-RVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAA 348
Query: 842 XXXPXPXPPXHXXPSPXP 895
P P P P P P
Sbjct: 349 GSIPLP-PQGRSAPPPPP 365
Score = 25.8 bits (54), Expect = 9.1
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = +3
Query: 774 PXTPXXXXXXXXXLPXPTXPTXLPXXPPP-XPPXTXXXPPXXSPS--FSXPP 920
P P +P P P PPP P T PP S S S PP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP 389
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/54 (25%), Positives = 16/54 (29%)
Frame = +1
Query: 784 PPTTXXXXXXSXPQXXPXXXPXPXPPPPXXXPXXPPXXXLPFLXXPXPGGXXPP 945
PP+ S P P P P PP P +P P PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 31.5 bits (68), Expect = 0.18
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 284 AIAGPALINPSRTLRPTFSIFLKSFHLGSGAALTAP 177
AIA P +I+P ++RP S+F+KS A + +P
Sbjct: 202 AIADPNIISPIDSVRPLLSLFIKSITSAISALILSP 237
>SPAC23C11.01 |||ER membrane protein, ICE2
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -3
Query: 221 LKSFH-LGSGAALTAPRASTNAKTKLKIRTKFILPKFYSAGEFKIPIQYRSTRTLXMIK 48
L+S H L S + T PR N + K + P ++ F+I + Y TR L I+
Sbjct: 291 LQSVHYLISTISATLPRTLYNIVLFMVAAAKTVAPSVFATFAFRISVMYAVTRILPAIQ 349
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +1
Query: 832 PXXXPXPXPPPPXXXPXXPPXXXLPFLXXPXPGGXXPPXP 951
P P P PPP PP P + P PP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 852 PPPXPPXTXXXPPXXSPSFSXPPXXXXXXXAXPPXP 959
PPP PP P +P PP PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = +3
Query: 816 PXPTXPTXLPXXPPPXPPXTXXXPPXXSPSFSXPP 920
P P + PP PP + PP P + PP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +1
Query: 832 PXXXPXPXPPPPXXXPXXPPXXXLPFLXXPXPGGXXPPXP 951
P P PPPP PP P + P PP P
Sbjct: 1699 PPQMSAPTPPPPPMS--VPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 106
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 467 DYISNI*HTTVIA-FLXVTECIYYYIHILNYVXI*YTISNVSHYV 598
+Y +I H +A FL +++C YY+ HIL V + + S+ Y+
Sbjct: 57 NYALSILHNICLASFLYLSKC-YYHTHILTSVRLDFCKSHAHTYI 100
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 3.0
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +3
Query: 729 APSXPXXXXXXXXXXPXTPXXXXXXXXXLPXPTXPTXLPXXPPPXPPXTXXXPPXXSPSF 908
AP P P P LP P P P PP P P P
Sbjct: 143 APPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPA-APVKSPPSAPSLPSAVPPMPPKV 201
Query: 909 SXPP 920
PP
Sbjct: 202 PPPP 205
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 5.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 644 PPXXXPPPXPPXXXPXXXSPGXAFPFXXXPXPPP 745
PP PPP PP PG P P PPP
Sbjct: 5 PPGNPPPPPPP--------PGFEPPSQPPPPPPP 30
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 816 PXPTXPTXLPXXPPPXPPXTXXXPPXXSPS 905
P P P LP PP T PP P+
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPA 1911
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 9.1
Identities = 21/106 (19%), Positives = 27/106 (25%)
Frame = +3
Query: 636 SXNXPXXXPPPXPXXXPXXXFPXXXPSLSXXAPSXPXXXXXXXXXXPXTPXXXXXXXXXL 815
S + P P P P P+ AP+ T +
Sbjct: 419 STSSPAPWAKPASSAAPSNPAPWQQPAAPQSAPALSMNPSSLPPWQQPTQQSAVQPSNLV 478
Query: 816 PXPTXPTXLPXXPPPXPPXTXXXPPXXSPSFSXPPXXXXXXXAXPP 953
P P +P P PP T P P P + PP
Sbjct: 479 PSQNAP-FIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPP 523
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,987,121
Number of Sequences: 5004
Number of extensions: 56811
Number of successful extensions: 277
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 493304942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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