Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E17
(924 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39852-6|AAK39259.1| 418|Caenorhabditis elegans Hypothetical pr... 241 5e-64
U97403-6|AAB52471.2| 583|Caenorhabditis elegans Hypothetical pr... 33 0.22
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 31 1.5
U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 29 6.2
U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 29 6.2
U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 29 6.2
U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence ... 29 6.2
U41557-1|AAA83300.1| 418|Caenorhabditis elegans Hypothetical pr... 28 8.2
>U39852-6|AAK39259.1| 418|Caenorhabditis elegans Hypothetical
protein K10C2.4 protein.
Length = 418
Score = 241 bits (590), Expect = 5e-64
Identities = 109/180 (60%), Positives = 139/180 (77%)
Frame = +1
Query: 169 MKSFIEYSSDSDFPIENLPYGVFTSDKNAQKHIGVAIGEWILDLNIISRLFDGPLLKSKQ 348
MKSF+ +SDFPI+NLPYGVF++ ++ +HIGVAIG+ IL+L I+ LFDGP LK+ Q
Sbjct: 1 MKSFVSVPQNSDFPIQNLPYGVFSTKADSSRHIGVAIGDQILNLAEIANLFDGPQLKAHQ 60
Query: 349 NVFKEEKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNAELREKAFVKQTDVQMHVPV 528
+VFK+ LNAFMAL +P W+EAR +Q+LL L++NA LR +A V Q+D MH+P
Sbjct: 61 DVFKQSTLNAFMALPRPAWLEARARIQQLLSEDCAVLRDNAHLRSRALVAQSDATMHLPA 120
Query: 529 EVGDYTDFYSSLQHATNVGIMFRGKEAALFENWKHLPVGYHGRSSSIVISGTPIHXPYGK 708
++GDYTDFYSS+ HATNVGIMFRGKE AL NWK LPVGYHGR+SSIV+SGT + P G+
Sbjct: 121 QIGDYTDFYSSIHHATNVGIMFRGKENALMPNWKWLPVGYHGRASSIVVSGTDLKRPVGQ 180
Score = 37.1 bits (82), Expect = 0.018
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 738 PHFGPXRLMDFDLEVGAFVGXPPHTGGKVCP 830
P FGP +LMDF+LE+ FVG P + G P
Sbjct: 189 PSFGPSKLMDFELEMAFFVGGPENELGTRVP 219
>U97403-6|AAB52471.2| 583|Caenorhabditis elegans Hypothetical
protein T10E9.3 protein.
Length = 583
Score = 33.5 bits (73), Expect = 0.22
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 4/136 (2%)
Frame = +1
Query: 148 CVKS*RKMKSFIEYSSDSDFPIENLPYGVFTSDKNAQKHIGVAIGEWILDLNIISRLFDG 327
C K+ IE+ D D + + VF + K + + +GE + DLN+I +
Sbjct: 198 CSTGGEDQKNRIEWKVDGDL----IYFSVFQNAKKGRWWTAIGVGESMNDLNMILLFAEN 253
Query: 328 PLLKSKQNVFKEEKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNAELREKAFVKQTD 507
LK KQ +FK E L + E E + L V++ + + +K F+ + D
Sbjct: 254 GRLK-KQGIFKTE--GKMQPLEVEY--EGIEVKKDLAIVNNGKANFDVSVEKKFFLDRAD 308
Query: 508 VQ----MHVPVEVGDY 543
Q M V + G Y
Sbjct: 309 EQGCFTMQVAILAGQY 324
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 418 ETLQKLLDVSSPALQNNA-ELREKAFVKQTDVQMHVPVEVGDYTDFYSSLQHATNVGIMF 594
E ++KL +V A NN EK ++ D ++ +GD T+ S+++ VG
Sbjct: 117 ELIKKLKEVRQSAAANNEISPMEKRALEWEDYRLRSEF-IGDVTNLTGSVEYFNAVGNFQ 175
Query: 595 RGKEAALFENWKHLPVGYHGRSSSIVIS 678
R ++LFE+ G++ +SI+ S
Sbjct: 176 RDFNSSLFESTAEKFDGFNEHITSILKS 203
>U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform a protein.
Length = 1837
Score = 28.7 bits (61), Expect = 6.2
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Frame = +1
Query: 364 EKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNAELREKAFVKQTDVQMH---VPVEV 534
+ L+ L P ++ ++ L L + PA+ +N ++R FVK + + + V V +
Sbjct: 92 KSLDQLPFLRNPAFLVGKDDLTLLSYLHEPAVLHNLQVR---FVKGSSIYTYCGIVLVAI 148
Query: 535 GDYTD---FYSS--LQHATNVGIMFRGKEAALFE--NWKHLPVGYHGRSSSIVISG 681
Y D Y +Q G R + +F H +G G+S SI++SG
Sbjct: 149 NPYADCSHIYGEEIIQVYRGAGKSAREMDPHIFAVAEEAHFDMGAFGKSQSIIVSG 204
>U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform b protein.
Length = 1839
Score = 28.7 bits (61), Expect = 6.2
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Frame = +1
Query: 364 EKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNAELREKAFVKQTDVQMH---VPVEV 534
+ L+ L P ++ ++ L L + PA+ +N ++R FVK + + + V V +
Sbjct: 92 KSLDQLPFLRNPAFLVGKDDLTLLSYLHEPAVLHNLQVR---FVKGSSIYTYCGIVLVAI 148
Query: 535 GDYTD---FYSS--LQHATNVGIMFRGKEAALFE--NWKHLPVGYHGRSSSIVISG 681
Y D Y +Q G R + +F H +G G+S SI++SG
Sbjct: 149 NPYADCSHIYGEEIIQVYRGAGKSAREMDPHIFAVAEEAHFDMGAFGKSQSIIVSG 204
>U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.
Length = 1839
Score = 28.7 bits (61), Expect = 6.2
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Frame = +1
Query: 364 EKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNAELREKAFVKQTDVQMH---VPVEV 534
+ L+ L P ++ ++ L L + PA+ +N ++R FVK + + + V V +
Sbjct: 92 KSLDQLPFLRNPAFLVGKDDLTLLSYLHEPAVLHNLQVR---FVKGSSIYTYCGIVLVAI 148
Query: 535 GDYTD---FYSS--LQHATNVGIMFRGKEAALFE--NWKHLPVGYHGRSSSIVISG 681
Y D Y +Q G R + +F H +G G+S SI++SG
Sbjct: 149 NPYADCSHIYGEEIIQVYRGAGKSAREMDPHIFAVAEEAHFDMGAFGKSQSIIVSG 204
>U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 10 protein.
Length = 490
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 334 LKSKQNVFKEEKLNAFMALTKPH-WIEARETLQKLLDVSSPALQNNAELREK 486
L++++ EK N + + K H W E RE + L+DV S L+ E+ E+
Sbjct: 278 LEAREICINSEK-NVPVIIEKIHQWTEVREVIIDLIDVESENLRKLKEMEEQ 328
>U41557-1|AAA83300.1| 418|Caenorhabditis elegans Hypothetical
protein C50F7.6 protein.
Length = 418
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +1
Query: 352 VFKEEKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNAELREKAFVKQTDV 510
V KEEK + + PH+ + + K+ V +P + + E+ +TD+
Sbjct: 225 VLKEEKRKSSFRIPVPHYFRSSKAKSKVYQVDAPDEEIEEVIDEEKMAAKTDL 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,153,995
Number of Sequences: 27780
Number of extensions: 475716
Number of successful extensions: 1150
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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