Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E16
         (996 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   6.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.4  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   6.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   8.5  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 133 SLRLHRSGPRSDGATRRS-RLLQGHR 207
           ++RL R+GPR++ A     R++  HR
Sbjct: 179 NIRLKRAGPRTESAVYEPVRIMGVHR 204


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -1

Query: 441  GAPRPCARCSASTVPKPPWPCRSRLRALPG 352
            G P+P + CS +     P  C   L  L G
Sbjct: 1271 GGPQPYSACSENAFAAYPGDCTRYLHCLWG 1300



 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 852  PGXQPTSXHKSPPXRSXXPP 911
            P  QPT  H   P  S  PP
Sbjct: 1367 PEWQPTEWHPPIPPTSEKPP 1386


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 173 RRDAPDFFKDIEH 211
           RR AP  F+DI+H
Sbjct: 84  RRKAPQSFEDIQH 96


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 507 HGGLQLLAEGGGVLLDVQGGPCG 439
           +GG+  +++GGG + D   G  G
Sbjct: 387 NGGVCRISDGGGYICDCPSGTNG 409


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,029
Number of Sequences: 336
Number of extensions: 2993
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28340642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)