Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E16
(996 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 36 0.039
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.089
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 35 0.12
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 35 0.12
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.12
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.27
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 32 0.83
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.83
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 32 0.83
SB_58757| Best HMM Match : GRP (HMM E-Value=0.0041) 31 1.9
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 31 1.9
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061) 30 2.5
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 30 3.4
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 30 3.4
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 30 3.4
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20) 29 5.9
SB_59727| Best HMM Match : C2 (HMM E-Value=0.0018) 29 5.9
SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 29 5.9
SB_44584| Best HMM Match : DEAD_2 (HMM E-Value=0.12) 29 7.8
SB_29930| Best HMM Match : Collagen (HMM E-Value=0.067) 29 7.8
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 29 7.8
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.8
SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.8
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 36.3 bits (80), Expect = 0.039
Identities = 32/102 (31%), Positives = 37/102 (36%), Gaps = 7/102 (6%)
Frame = +2
Query: 662 TPPTPK-PXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXP--- 829
TPPTP P + I P P T P P P P PP +P
Sbjct: 187 TPPTPPAPPSPPIPTAPPTP-PMP-ETPLPPGSPHIPPAPLHPHIPPAPPNPSKAIATPN 244
Query: 830 PPXPRXETXXST---HLXPQIPPXSLSXAPPXPSNXXXANPS 946
PP P +T + P P S+ APP PS NPS
Sbjct: 245 PPMPETPLPPATPNPFIPPASPNPSIPPAPPNPSIPAPPNPS 286
Score = 32.7 bits (71), Expect = 0.48
Identities = 27/84 (32%), Positives = 30/84 (35%), Gaps = 1/84 (1%)
Frame = +2
Query: 674 PKPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXPRXET 853
P P I PP S P+ P P P P PP +P PP P T
Sbjct: 272 PAPPNPSIPAPPNP--SIPLAPPNPY-IPPAPPNLFIPSAPP---NPHIPPAPPNPYIPT 325
Query: 854 XXSTHLXPQIPP-XSLSXAPPXPS 922
P PP S+ APP PS
Sbjct: 326 APPNPSIPPAPPNPSIPPAPPNPS 349
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/85 (24%), Positives = 28/85 (32%)
Frame = +2
Query: 665 PPTPKPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXPR 844
PP P + I P P+ P P P P PP +P PP
Sbjct: 230 PPAPPNPSKAIATPNPPMPETPLPPATPN--PFIPPASPNPSIPPAPPNPSIPAPPNPSI 287
Query: 845 XETXXSTHLXPQIPPXSLSXAPPXP 919
+ ++ P P + APP P
Sbjct: 288 PLAPPNPYIPPAPPNLFIPSAPPNP 312
Score = 30.3 bits (65), Expect = 2.5
Identities = 25/102 (24%), Positives = 30/102 (29%), Gaps = 1/102 (0%)
Frame = +2
Query: 620 AXXTPQXXDQGXXXTPPTPKPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPP 799
A TP P TP P P + + P + P P PP
Sbjct: 239 AIATPNPPMPETPLPPATPNPFIPPASPNPSIPPAPPNPSIPAPPNPSIPLAPPNPYIPP 298
Query: 800 XXXSPRXXXPPPXPRXETXXSTHLXPQIPP-XSLSXAPPXPS 922
+ PP P P PP S+ APP PS
Sbjct: 299 APPNLFIPSAPPNPHIPPAPPNPYIPTAPPNPSIPPAPPNPS 340
Score = 29.1 bits (62), Expect = 5.9
Identities = 20/71 (28%), Positives = 25/71 (35%)
Frame = +2
Query: 707 PXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXPRXETXXSTHLXPQIP 886
P + P T P P P+ P TPP +P P P H+ P P
Sbjct: 179 PPAPSTIPTPPTPPA--PPSPPIPTAPPTPPMPETPLPPGSPHIP--PAPLHPHIPPAPP 234
Query: 887 PXSLSXAPPXP 919
S + A P P
Sbjct: 235 NPSKAIATPNP 245
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 35.1 bits (77), Expect = 0.089
Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Frame = +3
Query: 720 FPSPFTQ---RXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPP 890
FPSP Q + P + P PP P PP G+ P QP+S H P
Sbjct: 566 FPSPQMQEPMQLPTSQPGGFPPQQRPGAPPTSQPGGF--PPQRPGMPPMSQPSSMHMQPS 623
Query: 891 XRSXXPPPXXPTFXXQTHP 947
+ P P+ + HP
Sbjct: 624 GQPQSTAPQQPSQPLRPHP 642
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 34.7 bits (76), Expect = 0.12
Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 8/91 (8%)
Frame = +3
Query: 675 PSRXRSILTFPPYXIFPSPFTQRXPAAXLXXXPSXXXLSPPP---XRXP---RAXXXPPL 836
PSR ++ PP P P L P ++PPP + P R+ PP
Sbjct: 302 PSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPP 361
Query: 837 XRGVKP--GXQPTSXHKSPPXRSXXPPPXXP 923
R +P G P + PP PPP P
Sbjct: 362 GRAPQPLGGPPPPPPGRRPPSGKINPPPPPP 392
Score = 33.1 bits (72), Expect = 0.36
Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Frame = +3
Query: 723 PSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS--PPXR 896
P P R P+ P P P P PP RG G +P + PP R
Sbjct: 216 PPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPPKR 275
Query: 897 SXXPPPXXPT 926
PP PT
Sbjct: 276 GSSNPPPPPT 285
Score = 29.9 bits (64), Expect = 3.4
Identities = 26/88 (29%), Positives = 28/88 (31%), Gaps = 4/88 (4%)
Frame = +2
Query: 590 QDQGPAYDDFAXXTPQXXDQGXXXTPPTPKPXAFDIDXPPXLXISFPIHTTXPRRXP--- 760
+DQ PA TP P P P I PP IS P +T P
Sbjct: 304 RDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPP-PISKPPTSTRSAPPPPPG 362
Query: 761 -XXXPLXXXPLTPPXXXSPRXXXPPPXP 841
PL P PP P PP P
Sbjct: 363 RAPQPLGGPPPPPPGRRPPSGKINPPPP 390
Score = 29.9 bits (64), Expect = 3.4
Identities = 21/83 (25%), Positives = 24/83 (28%)
Frame = +2
Query: 662 TPPTPKPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXP 841
TPP P P + PP + I P P PP PPP P
Sbjct: 317 TPPPPPPSRDQVPLPPP-PLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPP 375
Query: 842 RXETXXSTHLXPQIPPXSLSXAP 910
S + P PP P
Sbjct: 376 PGRRPPSGKINPPPPPPPAMDKP 398
Score = 29.5 bits (63), Expect = 4.4
Identities = 21/73 (28%), Positives = 25/73 (34%)
Frame = +3
Query: 705 PPYXIFPSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS 884
PP P P R P + P +PPP + + PP RG T
Sbjct: 244 PPGENRPPP-PMRGPTSG--GEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPL 300
Query: 885 PPXRSXXPPPXXP 923
PP R P P P
Sbjct: 301 PPSRDQAPAPPPP 313
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 34.7 bits (76), Expect = 0.12
Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 8/91 (8%)
Frame = +3
Query: 675 PSRXRSILTFPPYXIFPSPFTQRXPAAXLXXXPSXXXLSPPP---XRXP---RAXXXPPL 836
PSR ++ PP P P L P ++PPP + P R+ PP
Sbjct: 214 PSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPP 273
Query: 837 XRGVKP--GXQPTSXHKSPPXRSXXPPPXXP 923
R +P G P + PP PPP P
Sbjct: 274 GRAPQPLGGPPPPPPGRRPPSGKINPPPPPP 304
Score = 33.1 bits (72), Expect = 0.36
Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Frame = +3
Query: 723 PSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS--PPXR 896
P P R P+ P P P P PP RG G +P + PP R
Sbjct: 128 PPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPPKR 187
Query: 897 SXXPPPXXPT 926
PP PT
Sbjct: 188 GSSNPPPPPT 197
Score = 29.9 bits (64), Expect = 3.4
Identities = 26/88 (29%), Positives = 28/88 (31%), Gaps = 4/88 (4%)
Frame = +2
Query: 590 QDQGPAYDDFAXXTPQXXDQGXXXTPPTPKPXAFDIDXPPXLXISFPIHTTXPRRXP--- 760
+DQ PA TP P P P I PP IS P +T P
Sbjct: 216 RDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPP-PISKPPTSTRSAPPPPPG 274
Query: 761 -XXXPLXXXPLTPPXXXSPRXXXPPPXP 841
PL P PP P PP P
Sbjct: 275 RAPQPLGGPPPPPPGRRPPSGKINPPPP 302
Score = 29.9 bits (64), Expect = 3.4
Identities = 21/83 (25%), Positives = 24/83 (28%)
Frame = +2
Query: 662 TPPTPKPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXP 841
TPP P P + PP + I P P PP PPP P
Sbjct: 229 TPPPPPPSRDQVPLPPP-PLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPP 287
Query: 842 RXETXXSTHLXPQIPPXSLSXAP 910
S + P PP P
Sbjct: 288 PGRRPPSGKINPPPPPPPAMDKP 310
Score = 29.5 bits (63), Expect = 4.4
Identities = 21/73 (28%), Positives = 25/73 (34%)
Frame = +3
Query: 705 PPYXIFPSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS 884
PP P P R P + P +PPP + + PP RG T
Sbjct: 156 PPGENRPPP-PMRGPTSG--GEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPL 212
Query: 885 PPXRSXXPPPXXP 923
PP R P P P
Sbjct: 213 PPSRDQAPAPPPP 225
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 34.7 bits (76), Expect = 0.12
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +3
Query: 723 PSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSX 902
P P T P+ P PPP + PP G P PT+ PP +
Sbjct: 347 PPPPTNNPPSPP----PPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTN 402
Query: 903 XPPPXXP 923
PPP P
Sbjct: 403 GPPPPPP 409
Score = 31.9 bits (69), Expect = 0.83
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +3
Query: 786 LSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPPXXP 923
++PPP PP P PT+ PP + PPP P
Sbjct: 344 VNPPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPP 389
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = +3
Query: 771 PSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPPXXPT 926
P+ SPPP PP + P PP + PPP PT
Sbjct: 350 PTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPT 401
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 34.3 bits (75), Expect = 0.16
Identities = 25/94 (26%), Positives = 28/94 (29%), Gaps = 1/94 (1%)
Frame = +2
Query: 665 PPTPKPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXS-PRXXXPPPXP 841
P P P A PP P++ P P P P PP P PP P
Sbjct: 139 PYPPSPNA-PYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPP 197
Query: 842 RXETXXSTHLXPQIPPXSLSXAPPXPSNXXXANP 943
P PP + PP P NP
Sbjct: 198 PPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNP 231
Score = 33.1 bits (72), Expect = 0.36
Identities = 30/127 (23%), Positives = 34/127 (26%), Gaps = 2/127 (1%)
Frame = +2
Query: 569 TNEKLAPQDQGPAYDDFAXXTPQXXDQGXXXTPP--TPKPXAFDIDXPPXLXISFPIHTT 742
TN P P Y + P PP P P + PP +P
Sbjct: 86 TNFSPNPPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPN 145
Query: 743 XPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXPRXETXXSTHLXPQIPPXSLSXAPPXPS 922
P P P PP P PP P + P PP PP
Sbjct: 146 APYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPY---PPPPNAP 202
Query: 923 NXXXANP 943
N NP
Sbjct: 203 NPPPPNP 209
Score = 31.9 bits (69), Expect = 0.83
Identities = 22/76 (28%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Frame = +3
Query: 705 PPYXIFPSPFTQRXPAAXLXXXPSXXXLSPPPXRXP---RAXXXPPLXRGVKPGXQPTSX 875
PPY P+P P A P+ PP P A PP P P
Sbjct: 106 PPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPP 165
Query: 876 HKSPPXRSXXPPPXXP 923
+ PP PPP P
Sbjct: 166 NPPPPNAPYPPPPYPP 181
Score = 30.3 bits (65), Expect = 2.5
Identities = 27/114 (23%), Positives = 32/114 (28%), Gaps = 6/114 (5%)
Frame = +2
Query: 587 PQDQGPAYDDFAXXTPQXXDQGXXXTPPTPKPXAFDIDXPPXLXISFPIHTTXPRRXPXX 766
P P Y P PP P P + PP +P P P
Sbjct: 149 PPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPN 208
Query: 767 XPLXXXPLT-----PPXXXSPR-XXXPPPXPRXETXXSTHLXPQIPPXSLSXAP 910
P P PP +P PPP P+ P+ P LS P
Sbjct: 209 PPYPPPPNAPNPPYPPPPNAPNPPYPPPPNPQFAIALCLGHGPRSPEYRLSGGP 262
Score = 29.5 bits (63), Expect = 4.4
Identities = 22/86 (25%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +2
Query: 665 PPTPKPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXX-SPRXXXPPPXP 841
PP P P PP +P P P P P PP +P PP P
Sbjct: 154 PPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPP 213
Query: 842 RXETXXSTHLXPQIPPXSLSXAPPXP 919
+ P P PP P
Sbjct: 214 PPNAPNPPYPPPPNAPNPPYPPPPNP 239
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/72 (26%), Positives = 22/72 (30%)
Frame = +3
Query: 708 PYXIFPSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSP 887
PY P+P P A P+ PP P PP P + P
Sbjct: 123 PYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPP 182
Query: 888 PXRSXXPPPXXP 923
P PPP P
Sbjct: 183 PNPPYPPPPNPP 194
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 34.3 bits (75), Expect = 0.16
Identities = 25/93 (26%), Positives = 29/93 (31%)
Frame = +2
Query: 665 PPTPKPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXPR 844
P P + PP S P P P P+ PP SP P P PR
Sbjct: 1015 PHLKPPGPTEQPVPPKRKASPPSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPR 1074
Query: 845 XETXXSTHLXPQIPPXSLSXAPPXPSNXXXANP 943
ST P PP P P++ P
Sbjct: 1075 QPPPPSTS-QPVPPPRQPDPIPTNPAHPTEPPP 1106
Score = 30.3 bits (65), Expect = 2.5
Identities = 26/107 (24%), Positives = 33/107 (30%), Gaps = 2/107 (1%)
Frame = +3
Query: 657 PGRRXXPSRXRSILTFPPYXIFPSPFTQRXPAAXLXXXPSXXXLSPP--PXRXPRAXXXP 830
PG P + + P P P P + + P PP P PR P
Sbjct: 1020 PGPTEQPVPPKRKASPPSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPP 1079
Query: 831 PLXRGVKPGXQPTSXHKSPPXRSXXPPPXXPTFXXQTHPRLXLVXTP 971
+ V P QP +P PPP P PR + P
Sbjct: 1080 STSQPVPPPRQPDPIPTNPA-HPTEPPPRQPKPTPAPRPRSWVESQP 1125
Score = 29.1 bits (62), Expect = 5.9
Identities = 20/73 (27%), Positives = 23/73 (31%)
Frame = +3
Query: 705 PPYXIFPSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS 884
PP P P Q P + P P P PP P +P S +S
Sbjct: 1065 PPSEPAPPP-RQPPPPSTSQPVPPPRQPDPIPTNPAHPTEPPPRQPKPTPAPRPRSWVES 1123
Query: 885 PPXRSXXPPPXXP 923
P PPP P
Sbjct: 1124 QPELHRPPPPIKP 1136
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.5 bits (73), Expect = 0.27
Identities = 27/89 (30%), Positives = 29/89 (32%), Gaps = 1/89 (1%)
Frame = +2
Query: 650 GXXXTPPTPKPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXP 829
G +PP P P PP S P P P P P PP P P
Sbjct: 360 GINMSPPPPPP-------PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Query: 830 PPXPRXETXXSTHLXPQIPP-XSLSXAPP 913
PP P P PP L+ APP
Sbjct: 413 PPPPPPAPPPPPPPPPPPPPALRLACAPP 441
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +3
Query: 771 PSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPPXXPTFXXQTHPR 950
PS PPP P PP P P PP PPP P P
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP--PPPPPA 433
Query: 951 LXLVXTPSRXSXXXP 995
L L P R P
Sbjct: 434 LRLACAPPRLRFTSP 448
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/75 (26%), Positives = 21/75 (28%)
Frame = +3
Query: 723 PSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSX 902
P P P P SPPP P PP P P +PP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Query: 903 XPPPXXPTFXXQTHP 947
PPP P P
Sbjct: 426 PPPPPPPALRLACAP 440
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/72 (26%), Positives = 21/72 (29%)
Frame = +2
Query: 746 PRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXPRXETXXSTHLXPQIPPXSLSXAPPXPSN 925
P P P P PP SP PP P P PP PP P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Query: 926 XXXANPSXSXSC 961
P+ +C
Sbjct: 427 PPPPPPALRLAC 438
Score = 29.5 bits (63), Expect = 4.4
Identities = 16/59 (27%), Positives = 20/59 (33%)
Frame = +3
Query: 747 PAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPPXXP 923
P A + + +SPPP P P P P + PP PPP P
Sbjct: 350 PRAIVTDISAGINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPP 408
Score = 29.1 bits (62), Expect = 5.9
Identities = 20/77 (25%), Positives = 22/77 (28%)
Frame = +3
Query: 723 PSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSX 902
P P P + P PPP + P PP P P PP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Query: 903 XPPPXXPTFXXQTHPRL 953
PPP PRL
Sbjct: 427 PPPPPPALRLACAPPRL 443
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/58 (27%), Positives = 18/58 (31%)
Frame = +3
Query: 750 AAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPPXXP 923
+A + P PPP P PP P P PP PPP P
Sbjct: 358 SAGINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 31.9 bits (69), Expect = 0.83
Identities = 26/89 (29%), Positives = 31/89 (34%), Gaps = 1/89 (1%)
Frame = +3
Query: 660 GRRXXPSRXRSILTFPPYXIFPSPFTQRXPAAXLXXXPSXXXLSPPPXRXPR-AXXXPPL 836
G + P R PP P P R A P+ +PPP R + PP
Sbjct: 284 GIQPPPPPSRGAAPPPPSRGAPPPPPSRGSAPP--PPPARMGTAPPPPPPSRSSQRPPPP 341
Query: 837 XRGVKPGXQPTSXHKSPPXRSXXPPPXXP 923
RG P P+ PP PPP P
Sbjct: 342 SRGAPP--PPSMGMAPPPVGGAAPPPPPP 368
Score = 30.3 bits (65), Expect = 2.5
Identities = 24/88 (27%), Positives = 27/88 (30%), Gaps = 2/88 (2%)
Frame = +2
Query: 662 TPPTPKPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXP 841
T P P P + PP P + P P PP P PPP P
Sbjct: 324 TAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGP----PPPPP 379
Query: 842 RXETXXSTHL--XPQIPPXSLSXAPPXP 919
E + L P PP PP P
Sbjct: 380 PIEGRPPSSLGNPPPPPPPGRGAPPPGP 407
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/68 (27%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
Frame = +3
Query: 723 PSPFTQRXPAAXLXXXPSXXX-LSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRS 899
PS +QR P P ++PPP PP G P P + P
Sbjct: 331 PSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLG 390
Query: 900 XXPPPXXP 923
PPP P
Sbjct: 391 NPPPPPPP 398
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 31.9 bits (69), Expect = 0.83
Identities = 23/74 (31%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Frame = +2
Query: 704 PPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPP--XPRXETXXSTHLXP 877
PP L SFP P P P P PP P PPP P + +
Sbjct: 354 PPNLLFSFPPPPIIP-IPPPAMPAMFNPHVPPPMIGPVTVPPPPLIPPPQASIPPPTMIQ 412
Query: 878 QIPPXSLSXAPPXP 919
+PP S+ PP P
Sbjct: 413 TLPPPSV---PPPP 423
Score = 30.3 bits (65), Expect = 2.5
Identities = 22/74 (29%), Positives = 28/74 (37%)
Frame = +3
Query: 693 ILTFPPYXIFPSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTS 872
+ +FPP I P P PA P PPP P PPL + P +
Sbjct: 358 LFSFPPPPIIPIP----PPAMPAMFNPHV----PPPMIGPVTVPPPPLIPPPQASIPPPT 409
Query: 873 XHKSPPXRSXXPPP 914
++ P S PPP
Sbjct: 410 MIQTLPPPSVPPPP 423
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 31.9 bits (69), Expect = 0.83
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +2
Query: 728 PIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXPRXETXXSTHLXPQIPP 889
P T P P P P PP SP PPP P + L P+ PP
Sbjct: 198 PSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKL-PEPPP 250
>SB_58757| Best HMM Match : GRP (HMM E-Value=0.0041)
Length = 154
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -2
Query: 812 GXTXGGG*EGXXGGGAXEXGGGXPLCEWGRKYXVXGEXQYRTLTAW 675
G GGG G GGG GGG +G Y G Q R AW
Sbjct: 91 GDGGGGGGGGDGGGGGGGGGGGVGRARFGSTYTKIGTIQRR--LAW 134
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 30.7 bits (66), Expect = 1.9
Identities = 27/92 (29%), Positives = 31/92 (33%)
Frame = +3
Query: 675 PSRXRSILTFPPYXIFPSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKP 854
P S L +PP P R P PS P P R P + P P
Sbjct: 262 PRYPPSPLRYPPIPPRYPPSLIRYPTLPPRYPPSPPRYPPSPPRYPPSLHRYP----QSP 317
Query: 855 GXQPTSXHKSPPXRSXXPPPXXPTFXXQTHPR 950
P S + PP S PP P +HPR
Sbjct: 318 LRYPPSPIRYPPLPSRYPP--SPPRYPSSHPR 347
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/70 (27%), Positives = 23/70 (32%)
Frame = +2
Query: 632 PQXXDQGXXXTPPTPKPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXS 811
P PP+P A PP + P P P P P PP +
Sbjct: 43 PHFISSSPPPPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPA 102
Query: 812 PRXXXPPPXP 841
P+ PPP P
Sbjct: 103 PQ---PPPAP 109
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +3
Query: 792 PPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXR-SXXPPPXXPTF 929
PPP P A P P P PP + + PPP P F
Sbjct: 66 PPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPPAPPHF 112
>SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061)
Length = 503
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 303 DGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRK 446
+G+E+ + QL +SLQ L DA +++ L++S +E ++ K
Sbjct: 420 EGTETAIHQLKKENESLQTRLSDAQALSQKQLKESSSRLEEMHQQHNK 467
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2
Query: 839 VXGGXXXXAGXTXGGG*EGXXGGGAXEXGGG 747
V GG G GGG +G GGG GGG
Sbjct: 767 VVGGGGGGDGGDGGGGGDGGGGGGGGGGGGG 797
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 839 VXGGXXXXAGXTXGGG*EGXXGGGAXEXGGG 747
V GG G GGG G GGG GGG
Sbjct: 768 VGGGGGGDGGDGGGGGDGGGGGGGGGGGGGG 798
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = +3
Query: 771 PSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPP 914
P PPP P G+ P P + + +PP + PPP
Sbjct: 192 PPGGYQQPPPGGYAPPPYVPQEGGGIPPQNHPLTNYPAPPPQGYAPPP 239
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.9 bits (64), Expect = 3.4
Identities = 27/110 (24%), Positives = 28/110 (25%), Gaps = 2/110 (1%)
Frame = +2
Query: 596 QGPAYDDFAXXTPQXXDQGXXXTPPTPK--PXAFDIDXPPXLXISFPIHTTXPRRXPXXX 769
Q P A P G PTP PP P P P
Sbjct: 74 QAPTPQTQASTAPPLVPAGVEAPTPTPMVAQSVAPTPPPPPRAPETPSQAPSPP-PPPTS 132
Query: 770 PLXXXPLTPPXXXSPRXXXPPPXPRXETXXSTHLXPQIPPXSLSXAPPXP 919
P P PP PPP P P I P + AP P
Sbjct: 133 PATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVP 182
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +2
Query: 794 PPXXXSPRXXXPPPXPRXETXXSTHLXPQIPPXSLSXAPPXPS 922
PP P PPP P + P PP S AP P+
Sbjct: 684 PPPPPPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPA 726
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 312 ESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKA 449
E V+Q+L + G+ DA AK E +Q IER E+LRKA
Sbjct: 1007 EIVIQKLRDKLAAKSGS-SDALAAAKAREENLKQQIERLNEDLRKA 1051
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +2
Query: 785 PLTPPXXXSPRXXXPPPXPRXETXXSTHLXPQIPPXSLSXAPPXPSNXXXANPSXSXS 958
P++ P + P P P S++ P P S P PS+ ++PS + S
Sbjct: 459 PISNPSISTSPISNPSPRPHPSPHPSSNPSPNPSPNPSSDPSPNPSSNPSSDPSPNPS 516
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 29.1 bits (62), Expect = 5.9
Identities = 20/77 (25%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Frame = +3
Query: 771 PSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPP--PXXPTFXXQTH 944
P SPP P+ P + P S +PP PP P P +T
Sbjct: 608 PKHESPSPPSRVPPQPETAPKPFPNITPPEVRPSLPGTPPETKTKPPLAPYPPKTSPKTT 667
Query: 945 PRLXLVXTPSRXSXXXP 995
P+ + PSR P
Sbjct: 668 PKPHIPPAPSRPPPQLP 684
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/70 (25%), Positives = 20/70 (28%)
Frame = +3
Query: 705 PPYXIFPSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS 884
PP +P P P + PP P PP G P P
Sbjct: 923 PPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAP 982
Query: 885 PPXRSXXPPP 914
PP PPP
Sbjct: 983 PPPPPPPPPP 992
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPPXXP 923
+PPP P PP G P P +PP PPP P
Sbjct: 952 APPPPPPPGGSAPPP--GGGAPPLPPPPGGSAPPPPPPPPPPPPP 994
>SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1432
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +2
Query: 746 PRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXPRXETXXSTHLXPQIPP 889
PR P P PLT P + P P PR + P PP
Sbjct: 1210 PRGRPRKYPKGAMPLTGPACALEQPAVPVPRPRGRPRKQAPIQPLHPP 1257
>SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20)
Length = 2232
Score = 29.1 bits (62), Expect = 5.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 435 PRPCARCSASTVPKPPWPCRSRLRALPGD 349
P+ RC +S PW C S + AL GD
Sbjct: 821 PKRIPRCESSETRHWPWSCASGIAALVGD 849
>SB_59727| Best HMM Match : C2 (HMM E-Value=0.0018)
Length = 482
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 809 SPRXXXPPPXPRXETXXSTHLXPQIPPXSLSXAPPXPSNXXXANPS 946
SPR PPP P+ T T Q+PP +L+ A P + A+PS
Sbjct: 9 SPRIP-PPPSPKHYTP--TQPINQVPPPALTTAIPTVAAYQAAHPS 51
>SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 352
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/52 (36%), Positives = 21/52 (40%)
Frame = +3
Query: 774 SXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPPXXPTF 929
S L+PPP P PP GV P +PP PPP PTF
Sbjct: 173 SPGILAPPPA-PPGVLAPPPAPPGVLPPPP------APPGALIPPPPAPPTF 217
>SB_44584| Best HMM Match : DEAD_2 (HMM E-Value=0.12)
Length = 540
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 833 GGXXXXAGXTXGGG*EGXXGGGAXEXGGGXPLCEWG 726
G G GGG G GGG GGG CE G
Sbjct: 76 GDTDGGGGCGGGGGGGGGVGGGGGGGGGGGDDCEDG 111
>SB_29930| Best HMM Match : Collagen (HMM E-Value=0.067)
Length = 129
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 797 GG*EGXXGGGAXEXGGGXPLCEWG 726
GG EG G G E GGG CE G
Sbjct: 78 GGCEGGGGSGGCEGGGGCVGCEGG 101
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 28.7 bits (61), Expect = 7.8
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +1
Query: 82 SSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFXNNSLTRS 261
S + S S H + RS R P+ + RRSR Q R+P + + S
Sbjct: 214 SRSRSRSRSHRKSRKRSESRSRSRSPKKSRSARRSRSPQKSRSPQRSRS-PRSSKRYRSS 272
Query: 262 PSQRTHRTSAR 294
S R HR+ +R
Sbjct: 273 RSHRKHRSHSR 283
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 49 TLPLCCSPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRL 192
T+P +PV IS LS TV+ G+ +R + + R DG TRR L
Sbjct: 323 TVPSNNAPVVISR-LSRVTVYSGQLIRFLIPENTFSDREDGGTRRLNL 369
>SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 432 RPCARCSASTVPKPPWPCRSRLRALPGD 349
+ C C P PP PC+ R+ LP D
Sbjct: 121 KSCFSCRRRQQPPPPPPCQQRMADLPVD 148
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,838,491
Number of Sequences: 59808
Number of extensions: 428884
Number of successful extensions: 2507
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2967383049
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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