Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E16
(996 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 32 0.55
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 0.97
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 31 0.97
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.7
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 31 1.7
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 31 1.7
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 31 1.7
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 31 1.7
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 31 1.7
AF036699-6|AAB88357.1| 170|Caenorhabditis elegans Hypothetical ... 31 1.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.7
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 30 2.2
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 30 2.2
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 30 2.2
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 2.2
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 30 2.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 2.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.9
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 3.9
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 3.9
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 29 6.8
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 6.8
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 6.8
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 6.8
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 6.8
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.0
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 9.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 9.0
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 9.0
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 9.0
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.5 bits (73), Expect = 0.24
Identities = 31/100 (31%), Positives = 34/100 (34%), Gaps = 4/100 (4%)
Frame = +2
Query: 602 PAYDDFAXXTPQXXDQGXXXTPPTP--KPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPL 775
P + PQ D PP P K A PP P T PR P P
Sbjct: 103 PGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVP-RTPPPRSPPPRRP- 160
Query: 776 XXXPLTPPXXXSPRXXXP--PPXPRXETXXSTHLXPQIPP 889
P+TPP SP+ P PP P T P PP
Sbjct: 161 ---PMTPP---SPQRRPPRTPPSPEPRNPPRTPPSPIPPP 194
Score = 32.7 bits (71), Expect = 0.42
Identities = 23/87 (26%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Frame = +2
Query: 632 PQXXDQGXXXTPPTPKPXAFDIDXPPXLXISF--PIHTTXPRRXPXXXPLXXXPLTPPXX 805
P + +PP P P PP P+ P+R P P P PP
Sbjct: 127 PPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPP-- 184
Query: 806 XSPRXXXPPPXPRXETXXSTHLXPQIP 886
+P PPP PR + L + P
Sbjct: 185 RTPPSPIPPPPPRLNSHDRRALRARRP 211
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPPLXRG-VKPGXQPTSXHKSPPXRSXXPPP 914
SPPP R P P P +P + ++PP PPP
Sbjct: 154 SPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 32.3 bits (70), Expect = 0.55
Identities = 31/137 (22%), Positives = 43/137 (31%), Gaps = 2/137 (1%)
Frame = +2
Query: 542 KKVSSNVXETNEKLAPQDQGPAYDDFAXXTPQXXDQGXXXTPPTPKPX-AFDIDXPPXLX 718
++ S+ V + K PQ P Q PP P P A + P
Sbjct: 285 QQASAPVQQAPPKPVPQQTPPVQQAPPKPAVQQAPTRAAPAPPKPAPQQAPPVQQNPPKP 344
Query: 719 ISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXPRXETXXSTHLXPQIPP-XS 895
++ P P+ P P +P PP P + S+ Q PP +
Sbjct: 345 AVQQAQAPVVQQAPAP-PVQQAPPKPTPQQAPPVRQNPPMPAVQQAPSSQQATQAPPKPA 403
Query: 896 LSXAPPXPSNXXXANPS 946
APP N PS
Sbjct: 404 PQQAPPVQQNPPKPTPS 420
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.5 bits (68), Expect = 0.97
Identities = 24/95 (25%), Positives = 30/95 (31%), Gaps = 1/95 (1%)
Frame = +2
Query: 608 YDDFAXXTPQXXDQGXXXTPPTPKPXA-FDIDXPPXLXISFPIHTTXPRRXPXXXPLXXX 784
+ +F P+ + PP+ P F I P + P T P P
Sbjct: 425 FAEFKLVEPKTPTRVAPPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPS 484
Query: 785 PLTPPXXXSPRXXXPPPXPRXETXXSTHLXPQIPP 889
P P S PPP P T S P PP
Sbjct: 485 PSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 519
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/75 (28%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Frame = +3
Query: 708 PYXIFPSPFTQRXPAAX--LXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHK 881
P + P P P + PS +PP P A P P QP K
Sbjct: 436 PTRVAPPPPPSAPPTIKFPISTGPSYSSTTPPTTPKP-APPPPSRIPNPSPSPQPAEVSK 494
Query: 882 SPPXRSXXPPPXXPT 926
SPP PP P+
Sbjct: 495 SPPPPPPLPPIATPS 509
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 31.5 bits (68), Expect = 0.97
Identities = 23/58 (39%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = -1
Query: 912 GGAXESEXGGICGXRWVEXXVSXRGXGGGXXX--RGXXXXGGVRGXXWRGXX*GXRRG 745
GG GG G R E S RG GGG RG G G WRG G RG
Sbjct: 59 GGDRGRSPGGFRGDR--EGGFSPRGRGGGFRGGDRGGFRGGDRGGSPWRGGDRGNFRG 114
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/85 (27%), Positives = 27/85 (31%)
Frame = +2
Query: 665 PPTPKPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXPR 844
PP P P + P +P H P P P PP P PPP P
Sbjct: 98 PPAPYPQ-HAVPAPAPPPAPYPQHAV-PAPAPYQQQPPPPP-PPPHYPPPPPHYPPPPPA 154
Query: 845 XETXXSTHLXPQIPPXSLSXAPPXP 919
+ H P+ S PP P
Sbjct: 155 PHSAYIDHSAPRPAYIEHSAPPPQP 179
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPPXXP 923
+PPP P+ P +P P H PP PPP P
Sbjct: 111 APPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAP 155
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/74 (27%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = +2
Query: 746 PRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXPRXETXXSTHLXPQIPPXS--LSXAPPXP 919
P P P P+ PP P PPP P P +P S S AP
Sbjct: 36 PMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSYAPAPV 95
Query: 920 SNXXXANPSXSXSC 961
N P+ C
Sbjct: 96 FNQYAMQPANDCCC 109
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 7 FTTTSL*GIP*DFDTLPLCCSPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRS 186
++ +S+ G+P D P P + SS+ + HH + S+ R S+ AT RS
Sbjct: 97 YSASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHASSISKSISSSREDLLSEHATSRS 156
Query: 187 --RLLQGHRTP 213
R + HR P
Sbjct: 157 TVREIPVHRAP 167
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 7 FTTTSL*GIP*DFDTLPLCCSPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRS 186
++ +S+ G+P D P P + SS+ + HH + S+ R S+ AT RS
Sbjct: 97 YSASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHASSISKSISSSREDLLSEHATSRS 156
Query: 187 --RLLQGHRTP 213
R + HR P
Sbjct: 157 TVREIPVHRAP 167
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 7 FTTTSL*GIP*DFDTLPLCCSPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRS 186
++ +S+ G+P D P P + SS+ + HH + S+ R S+ AT RS
Sbjct: 97 YSASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHASSISKSISSSREDLLSEHATSRS 156
Query: 187 --RLLQGHRTP 213
R + HR P
Sbjct: 157 TVREIPVHRAP 167
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 7 FTTTSL*GIP*DFDTLPLCCSPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRS 186
++ +S+ G+P D P P + SS+ + HH + S+ R S+ AT RS
Sbjct: 97 YSASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHASSISKSISSSREDLLSEHATSRS 156
Query: 187 --RLLQGHRTP 213
R + HR P
Sbjct: 157 TVREIPVHRAP 167
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/86 (27%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Frame = +2
Query: 668 PTPKPXAFD-IDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXPR 844
P+PKP + + P +S I T P L L P R PPP PR
Sbjct: 497 PSPKPVTPEPLPSPTITDVSLAIATPSPEESDDDQELI---LPSPEPSPVREPTPPPPPR 553
Query: 845 XETXXSTHLXPQIPPXSLSXAPPXPS 922
T P+ P + PP P+
Sbjct: 554 EPTPREPTPEPE-PVREPTPPPPPPA 578
>AF036699-6|AAB88357.1| 170|Caenorhabditis elegans Hypothetical
protein F58F6.3 protein.
Length = 170
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 453 GGPCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 343
GG GA A C A++ P PP+ S RA+P W
Sbjct: 96 GGEGGAKNNRAVCLAASRPPPPYLIYSGRRAMPSAEW 132
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPP 914
SPPP P+ PPL P P + PP PPP
Sbjct: 236 SPPPPPPPKGS--PPLAGSGSPPPPPAAGSPPPPRTGSPPPP 275
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPP 914
SPPP P A PP R P PT PP PPP
Sbjct: 254 SPPP---PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 28.3 bits (60), Expect = 9.0
Identities = 23/89 (25%), Positives = 25/89 (28%), Gaps = 2/89 (2%)
Frame = +3
Query: 723 PSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKP--GXQPTSXHKSPPXR 896
P P T P P PP + PP RG P P SPP
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 324
Query: 897 SXXPPPXXPTFXXQTHPRLXLVXTPSRXS 983
PP P Q R +P S
Sbjct: 325 GTGSPPPPPRQKRQAPERSPPTGSPPTGS 353
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPP 914
SPPP P+ PPL P P + PP PPP
Sbjct: 257 SPPPPPPPKGS--PPLAGSGSPPPPPAAGSPPPPRTGSPPPP 296
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPP 914
SPPP P A PP R P PT PP PPP
Sbjct: 275 SPPP---PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 28.3 bits (60), Expect = 9.0
Identities = 23/89 (25%), Positives = 25/89 (28%), Gaps = 2/89 (2%)
Frame = +3
Query: 723 PSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKP--GXQPTSXHKSPPXR 896
P P T P P PP + PP RG P P SPP
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 345
Query: 897 SXXPPPXXPTFXXQTHPRLXLVXTPSRXS 983
PP P Q R +P S
Sbjct: 346 GTGSPPPPPRQKRQAPERSPPTGSPPTGS 374
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPP 914
SPPP P+ PPL P P + PP PPP
Sbjct: 242 SPPPPPPPKGS--PPLAGSGSPPPPPAAGSPPPPRTGSPPPP 281
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPP 914
SPPP P A PP R P PT PP PPP
Sbjct: 260 SPPP---PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 28.3 bits (60), Expect = 9.0
Identities = 23/89 (25%), Positives = 25/89 (28%), Gaps = 2/89 (2%)
Frame = +3
Query: 723 PSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKP--GXQPTSXHKSPPXR 896
P P T P P PP + PP RG P P SPP
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 330
Query: 897 SXXPPPXXPTFXXQTHPRLXLVXTPSRXS 983
PP P Q R +P S
Sbjct: 331 GTGSPPPPPRQKRQAPERSPPTGSPPTGS 359
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +2
Query: 785 PLTPPXXXSPRXXXPPPXPRXETXXSTHLXPQIPPXSLSXAPPXPSNXXXANPS 946
P TP P PP + T PP + APP PS +PS
Sbjct: 426 PKTPTRVAPPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPS 479
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/74 (25%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Frame = +3
Query: 708 PYXIFPSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLX-RGVKPGXQPTSXHKS 884
P + P P P S P P+ PP P QP KS
Sbjct: 429 PTRVAPPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKS 488
Query: 885 PPXRSXXPPPXXPT 926
PP PP P+
Sbjct: 489 PPPPPPLPPIATPS 502
Score = 28.3 bits (60), Expect = 9.0
Identities = 23/95 (24%), Positives = 29/95 (30%), Gaps = 1/95 (1%)
Frame = +2
Query: 608 YDDFAXXTPQXXDQGXXXTPPTPKPXA-FDIDXPPXLXISFPIHTTXPRRXPXXXPLXXX 784
+ +F P+ + PP+ P F I + P T P P
Sbjct: 418 FAEFKLVEPKTPTRVAPPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPS 477
Query: 785 PLTPPXXXSPRXXXPPPXPRXETXXSTHLXPQIPP 889
P P S PPP P T S P PP
Sbjct: 478 PSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 67 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 240
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 241 NNSLTRSPSQRTHRTSA 291
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 67 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 240
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 241 NNSLTRSPSQRTHRTSA 291
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 67 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 240
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 241 NNSLTRSPSQRTHRTSA 291
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 67 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 240
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 241 NNSLTRSPSQRTHRTSA 291
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 67 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 240
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 241 NNSLTRSPSQRTHRTSA 291
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 67 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 240
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 241 NNSLTRSPSQRTHRTSA 291
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/83 (28%), Positives = 28/83 (33%)
Frame = +3
Query: 705 PPYXIFPSPFTQRXPAAXLXXXPSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS 884
PP FP P P P PPP P PP R P +P H+
Sbjct: 26 PPDWFFPGPLRPWGPPP-----PWHRNRGPPPFGPP-----PPWDRPPPPWRRPP-WHRR 74
Query: 885 PPXRSXXPPPXXPTFXXQTHPRL 953
PP PPP Q P++
Sbjct: 75 PPWGLPPPPPPPEPEPQQDQPQV 97
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 67 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFX 240
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 241 NNSLTRSPSQRTHRTSA 291
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 842 AVXGGXXXXAGXTXGGG*EGXXGGGAXEXGGGXPLCE 732
AV GG G GGG G GGG GGG C+
Sbjct: 96 AVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGGGGGCQ 132
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/107 (25%), Positives = 35/107 (32%)
Frame = +2
Query: 521 QESQKLXKKVSSNVXETNEKLAPQDQGPAYDDFAXXTPQXXDQGXXXTPPTPKPXAFDID 700
+ S K N TNE + + D F+ T + PP P P + D+
Sbjct: 1298 KNSSKKRNNRRGNRRNTNEHIQANHEDS--DSFS--TSRSSSPSPPPPPPPPPPPSDDLT 1353
Query: 701 XPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXP 841
P P + P P P PP SP PPP P
Sbjct: 1354 PVPPPPPPPPTMSKAPTGVPLPVP------PPPPLFSPSMILPPPPP 1394
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPPLXRGVKPGXQPTSXHK--SPPXRSXXPPPXXP 923
+P P + ++ PP P +PT H +PP S PPP P
Sbjct: 753 TPQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPPLXRGVKPGXQPTSXHK--SPPXRSXXPPPXXP 923
+P P + ++ PP P +PT H +PP S PPP P
Sbjct: 753 TPQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 833 GGXXXXAGXTXGGG*EGXXGGGAXEXGGGXPLCEWG 726
GG G GGG G GGG GGG C G
Sbjct: 124 GGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGG 159
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 833 GGXXXXAGXTXGGG*EGXXGGGAXEXGGGXPLCEWG 726
GG G GGG G GGG GGG C G
Sbjct: 131 GGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGG 166
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 833 GGXXXXAGXTXGGG*EGXXGGGAXEXGGGXPLCEWG 726
GG G GGG G GGG GGG C G
Sbjct: 146 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 181
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 863 LXAXFHXAVXGGXXXXAGXTXGGG*EGXXGGGAXEXGGG 747
L + F GG G GGG G GGG GGG
Sbjct: 46 LASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGG 84
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 863 LXAXFHXAVXGGXXXXAGXTXGGG*EGXXGGGAXEXGGG 747
L + F GG G GGG G GGG GGG
Sbjct: 46 LASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGGGSGGGG 84
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +3
Query: 792 PPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS---PPXRSXXPPPXXPTFXXQTHPR 950
PPP P + G +P T H+S PP S PPP PT PR
Sbjct: 523 PPPLMSPVSRHNSMSSTG-RPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 577
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +3
Query: 792 PPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS---PPXRSXXPPPXXPTFXXQTHPR 950
PPP P + G +P T H+S PP S PPP PT PR
Sbjct: 814 PPPLMSPVSRHNSMSSTG-RPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 868
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +3
Query: 792 PPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS---PPXRSXXPPPXXPTFXXQTHPR 950
PPP P + G +P T H+S PP S PPP PT PR
Sbjct: 829 PPPLMSPVSRHNSMSSTG-RPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 883
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +3
Query: 792 PPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS---PPXRSXXPPPXXPTFXXQTHPR 950
PPP P + G +P T H+S PP S PPP PT PR
Sbjct: 829 PPPLMSPVSRHNSMSSTG-RPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 883
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.8
Identities = 25/91 (27%), Positives = 29/91 (31%)
Frame = +2
Query: 674 PKPXAFDIDXPPXLXISFPIHTTXPRRXPXXXPLXXXPLTPPXXXSPRXXXPPPXPRXET 853
PKP F PP + F P P P+ + PP PPP P
Sbjct: 59 PKPSFF---IPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMM--GGIPPPPPMFGA 113
Query: 854 XXSTHLXPQIPPXSLSXAPPXPSNXXXANPS 946
P PP L AP P NP+
Sbjct: 114 PP-----PPPPPSGLGVAPQPPRPKTPVNPA 139
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +3
Query: 792 PPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS---PPXRSXXPPPXXPTFXXQTHPR 950
PPP P + G +P T H+S PP S PPP PT PR
Sbjct: 523 PPPLMSPVSRHNSMSSTG-RPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 577
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +3
Query: 792 PPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS---PPXRSXXPPPXXPTFXXQTHPR 950
PPP P + G +P T H+S PP S PPP PT PR
Sbjct: 814 PPPLMSPVSRHNSMSSTG-RPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 868
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +3
Query: 792 PPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS---PPXRSXXPPPXXPTFXXQTHPR 950
PPP P + G +P T H+S PP S PPP PT PR
Sbjct: 829 PPPLMSPVSRHNSMSSTG-RPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 883
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +3
Query: 792 PPPXRXPRAXXXPPLXRGVKPGXQPTSXHKS---PPXRSXXPPPXXPTFXXQTHPR 950
PPP P + G +P T H+S PP S PPP PT PR
Sbjct: 829 PPPLMSPVSRHNSMSSTG-RPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 883
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/63 (33%), Positives = 24/63 (38%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPPXXPTFXXQTHPRLXLVXT 968
SPPP PR PP +G P+ PP S PP P PR +
Sbjct: 59 SPPPA--PRPSGQPPGPQGPSDLPGPSGAPPGPPHPSG--PPHRPHPHPSRRPRPTRLPR 114
Query: 969 PSR 977
PSR
Sbjct: 115 PSR 117
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 453 GGPCGAPRPCARCSASTVPKPP 388
GG CG P PC + + V PP
Sbjct: 65 GGGCGGPAPCGGAAPAYVAPPP 86
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 833 GGXXXXAGXTXGGG*EGXXGGGAXEXGGG 747
GG +G + GGG GGG GGG
Sbjct: 802 GGGGGGSGGSGGGGSNSNSGGGGGNGGGG 830
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/52 (26%), Positives = 16/52 (30%)
Frame = +3
Query: 771 PSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPPXXPT 926
P + P P PR P P P PP PPP P+
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 833 GGXXXXAGXTXGGG*EGXXGGGAXEXGGGXPLCEWG 726
GG G GGG G GGG GGG C G
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 833 GGXXXXAGXTXGGG*EGXXGGGAXEXGGGXPLCEWG 726
GG G GGG G GGG GGG C G
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 833 GGXXXXAGXTXGGG*EGXXGGGAXEXGGG 747
GG G GGG G GGG GGG
Sbjct: 96 GGGGGGGGRGGGGGGRGGGGGGGGGRGGG 124
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/52 (26%), Positives = 16/52 (30%)
Frame = +3
Query: 771 PSXXXLSPPPXRXPRAXXXPPLXRGVKPGXQPTSXHKSPPXRSXXPPPXXPT 926
P + P P PR P P P PP PPP P+
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPP-LXRGVK-PGXQPTSXHKSPPXRSXXPPPXXPTFXXQTH 944
+P P + P+A PP +G PG P ++ PP + P P Q H
Sbjct: 607 APAPVQAPQAPQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYSPYPPPQQQQQH 660
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +3
Query: 789 SPPPXRXPRAXXXPP-LXRGVK-PGXQPTSXHKSPPXRSXXPPPXXPTFXXQTH 944
+P P + P+A PP +G PG P ++ PP + P P Q H
Sbjct: 607 APAPVQAPQAPQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYSPYPPPQQQQQH 660
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,372,281
Number of Sequences: 27780
Number of extensions: 316568
Number of successful extensions: 2041
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1803
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2605097262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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