Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E14
(916 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 33 0.24
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 31 1.7
07_03_1136 + 24218601-24218734,24218769-24219906 28 2.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.2
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 30 2.2
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 30 2.9
06_02_0127 + 12140843-12140966,12141170-12141567 29 3.9
07_03_0559 + 19475893-19476783 29 6.8
07_03_0177 - 14770777-14772045 29 6.8
02_01_0158 - 1103461-1104186 25 8.3
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 28 9.0
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 28 9.0
08_02_1431 + 27057706-27057900,27058701-27058815,27059123-270591... 28 9.0
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 33.5 bits (73), Expect = 0.24
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 391 KXXKXPPPPXKKXXFXXPPGPQKXXKPXP 305
K + PPPP KK F PP P + P P
Sbjct: 107 KPYRPPPPPRKKPQFQPPPQPPRAWDPSP 135
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 819 PPPPPXXKKNXFPXFXPPPNP 757
PPPPP K P F PPP P
Sbjct: 111 PPPPPRKK----PQFQPPPQP 127
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 819 PPPPPXXKKNXFPXFXPPPNP 757
PPPPP K N P PPP P
Sbjct: 359 PPPPPPPKLNTAPKPPPPPPP 379
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.3 bits (60), Expect(2) = 2.1
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 723 GXPXGGFFXXKGGXXGXKXXEXNFFXXGGGGGGXXI 830
G GG GG G E F GGGGGG I
Sbjct: 293 GAEGGGGGGGGGGGGGHGAPELGFSGGGGGGGGGEI 328
Score = 20.6 bits (41), Expect(2) = 2.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 804 GGGGGGXXIFVXGEK 848
GGGGGG + V K
Sbjct: 356 GGGGGGTKVRVCAPK 370
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 819 PPPPPXXKKNXFPXFXPPPNP 757
PPPPP P F PPP P
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPP 567
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 819 PPPPPXXKKNXFPXFXPPPNPL 754
PPPPP P PPP PL
Sbjct: 606 PPPPPILPNRSVPPPPPPPPPL 627
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 819 PPPPPXXKKNXFPXFXPPPNP 757
PPPPP N P PPP P
Sbjct: 438 PPPPPPLPPNMPPPLPPPPEP 458
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 819 PPPPPXXKKNXFPXFXPPPNPLXXKK 742
PPPPP K P PPP P KK
Sbjct: 1935 PPPPPVEGKPKPPPHAPPPPPPEAKK 1960
>06_02_0127 + 12140843-12140966,12141170-12141567
Length = 173
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +3
Query: 699 GXKXKKXGGXPXGGFFXXKGGXXGXKXXEXNFFXXGGGGGG 821
G K GG GG+ GG G + GGGGGG
Sbjct: 131 GGYNKGYGGGGGGGYSKGFGGGYGGGGYPGGGYYGGGGGGG 171
>07_03_0559 + 19475893-19476783
Length = 296
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 720 GGXPXGGFFXXKGGXXGXKXXEXNFFXXGGGGGG 821
GG GGF GG G + F GGG GG
Sbjct: 120 GGGGGGGFGGGSGGGVGGGGGQGGGFGAGGGVGG 153
>07_03_0177 - 14770777-14772045
Length = 422
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 720 GGXPXGGFFXXKGGXXGXKXXEXNFFXXGGGGGG 821
GG GG F KGG G F GGGGGG
Sbjct: 382 GGSGIGGGFG-KGGGFGFGVGGGGFGGGGGGGGG 414
>02_01_0158 - 1103461-1104186
Length = 241
Score = 25.4 bits (53), Expect(2) = 8.3
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 699 GXKXKKXGGXPXGGFFXX-KGGXXGXKXXEXNFFXXGGGGGG 821
G + GG P GG F + G GGGGGG
Sbjct: 112 GGGRRSGGGGPGGGCFKCGESGHMARDCFNGGGVGVGGGGGG 153
Score = 21.4 bits (43), Expect(2) = 8.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 804 GGGGGGXXIFVXGE 845
GGGGGG + GE
Sbjct: 185 GGGGGGGACYNCGE 198
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 819 PPPPPXXKKNXFPXFXPPPNP 757
PPPPP N P PPP P
Sbjct: 334 PPPPPSRFNNTTPKPPPPPPP 354
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 819 PPPPPXXKKNXFPXFXPPPNP 757
PPPPP + P PPP P
Sbjct: 222 PPPPPPPSPHRHPAAHPPPPP 242
>08_02_1431 +
27057706-27057900,27058701-27058815,27059123-27059170,
27059272-27059524,27059689-27059776,27059883-27059948,
27060335-27060403,27060492-27060597,27060639-27060793,
27061208-27061537
Length = 474
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 753 KGGXXGXKXXEXNFFXXGGGGGGXXIFVXGEKXKKK 860
KG K + N+ GGGGGG G+K K+K
Sbjct: 15 KGAKGEAKRKQSNWRGGGGGGGGRGDGGQGQKRKRK 50
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,590,293
Number of Sequences: 37544
Number of extensions: 221268
Number of successful extensions: 1446
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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