Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E14
         (916 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.0  
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)                   29   5.2  
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)                   29   6.9  
SB_44080| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.2  

>SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 201

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 819 PPPPPXXKKNXFPXFXPPPNPLXXKK 742
           PPPPP   +N FP   PPP P+  ++
Sbjct: 92  PPPPPPQLENDFP---PPPPPMNYRE 114


>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
          Length = 739

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -2

Query: 819 PPPPPXXKKNXFPXFXPPPNP 757
           PPPPP      FP   PPP P
Sbjct: 195 PPPPPPPPPPGFPGGAPPPPP 215


>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
          Length = 593

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -2

Query: 819 PPPPPXXKKNXFPXFXPPPNP 757
           PPPPP       P F PPP P
Sbjct: 474 PPPPPPPPPPPPPPFPPPPPP 494


>SB_44080| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 112

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 376 PPPPXKKXXFXXPPGPQKXXKP 311
           PPPP K   F  PP P+K   P
Sbjct: 11  PPPPEKCFGFRTPPPPRKIPDP 32


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,064,319
Number of Sequences: 59808
Number of extensions: 134766
Number of successful extensions: 535
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2645618622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)