Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E12
(940 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.44
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 31 1.0
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 31 1.0
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_1648| Best HMM Match : UPF0061 (HMM E-Value=5.2e-10) 30 3.1
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 28 9.5
SB_4828| Best HMM Match : Peptidase_C48 (HMM E-Value=3e-06) 28 9.5
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 32.7 bits (71), Expect = 0.44
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P + P P PPP P PPP P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 32.7 bits (71), Expect = 0.44
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P P PPP P PPP P
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 31.9 bits (69), Expect = 0.77
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P P PPP P PPP P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415
Score = 31.9 bits (69), Expect = 0.77
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P P PPP P PPP P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 31.9 bits (69), Expect = 0.77
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P P PPP P PPP P
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 31.9 bits (69), Expect = 0.77
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P P PPP P PPP P
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P P PP P PPP P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPP 806
PPP P P P P PPP P PPP
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPP 806
PPP P P P P PPP P PPP
Sbjct: 385 PPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P PPP P PPP P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P P PP P PPP P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P P PPP P P P P
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PP P P P P PPP P PPP P
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P PPP P PPP P
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P PPP P PPP P
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PPPP P GG PP PPP
Sbjct: 195 PPPPPPGPGGIPPPPPPIRGGVPPPP 220
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PPPP P GG PP PPP
Sbjct: 677 PPPPPPLPGGAAPPPPPPIGGGAPPP 702
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PPPP P GG PP PPP
Sbjct: 280 PPPPPPLTGGMLPPPFGGHPAAAPPP 305
>SB_1648| Best HMM Match : UPF0061 (HMM E-Value=5.2e-10)
Length = 371
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 290 PSAGAEDQGHRYKGPREWLGRAVDHPRRIGL*LRQHQTEER*RIRL 427
P A A ++ + K R+WLGR + R G H T+E+ RIR+
Sbjct: 262 PGAWALEEAQQQKNWRDWLGRYQERLGRNG----GHDTDEKRRIRM 303
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P P P P P PPP P
Sbjct: 105 PPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNP 154
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PPPP P G PP PPP
Sbjct: 374 PPPPPPPTNGPPPPPPPTNGPPPPPP 399
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PPPP P G PP PPP
Sbjct: 384 PPPPPPPTNGPPPPPPPTNGPPPPPP 409
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PPPP P G PP PPP
Sbjct: 375 PPPPPPTNGPPPPPPPTNGPPPPPPP 400
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PPPP P G PP PPP
Sbjct: 385 PPPPPPTNGPPPPPPPTNGPPPPPPP 410
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 665 PPPXPXXGGXXPPXXKXXXXXXPPP 739
PPP P GG PP PPP
Sbjct: 953 PPPPPPPGGSAPPPGGGAPPLPPPP 977
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PPPP P G PP PPP
Sbjct: 199 PPPPPPGFPGGAPPPPPPPFGAPPPP 224
>SB_4828| Best HMM Match : Peptidase_C48 (HMM E-Value=3e-06)
Length = 512
Score = 28.3 bits (60), Expect = 9.5
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +3
Query: 51 IVGHDQTARSKAYVTLAKGKMSKYLFICLICAYISTGHGKTVIVGQTYDYNNVVRKVHEQ 230
I HDQ+ YV + + CL AY + +I T + + RK+
Sbjct: 40 IEAHDQSESLLFYVDQNAALTREDISFCLKDAYFTEVEQDEMIAVVTKSFRDAARKLKNP 99
Query: 231 SVEANAIPLFK 263
E+N I + K
Sbjct: 100 IAESNTITILK 110
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PPPP GG PP PPP
Sbjct: 503 PPPPGAGQGGGPPPPGAGQGWGQPPP 528
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PPPP GG PP PPP
Sbjct: 536 PPPPGAGQGGGPPPPGAGQGWGQPPP 561
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PPPP GG PP PPP
Sbjct: 589 PPPPGAGQGGGPPPPGAGQGWGLPPP 614
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,499,836
Number of Sequences: 59808
Number of extensions: 368799
Number of successful extensions: 1270
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2740956230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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