BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP01_F_E12 (940 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 32 3.5 BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 32 3.5 AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 32 3.5 AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 32 3.5 BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein. 31 4.6 BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein. 31 4.6 BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled ... 31 4.6 AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein. 31 4.6 AF343404-1|AAK51400.1| 105|Homo sapiens psoriasis vulgaris immu... 31 8.0 >D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. Length = 505 Score = 31.9 bits (69), Expect = 3.5 Identities = 17/69 (24%), Positives = 19/69 (27%) Frame = +2 Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPPXXXXSXXXLXXXXXXXXXXXPPXXPXXXXXXPXX 841 PPPP P G PP + PPP + PP P P Sbjct: 289 PPPPPPHSSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVEVPPPPPNRMYPPPPP 348 Query: 842 XXXXPXPXG 868 P G Sbjct: 349 ALPSSAPSG 357 Score = 31.5 bits (68), Expect = 4.6 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +2 Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739 PPPP P GG PP PPP Sbjct: 277 PPPPPPSRGGPPPPPPPPHSSGPPPP 302 >BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrome-like protein. Length = 505 Score = 31.9 bits (69), Expect = 3.5 Identities = 17/69 (24%), Positives = 19/69 (27%) Frame = +2 Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPPXXXXSXXXLXXXXXXXXXXXPPXXPXXXXXXPXX 841 PPPP P G PP + PPP + PP P P Sbjct: 289 PPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPP 348 Query: 842 XXXXPXPXG 868 P G Sbjct: 349 ALPSSAPSG 357 Score = 31.5 bits (68), Expect = 4.6 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +2 Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739 PPPP P GG PP PPP Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPP 302 >AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. Length = 505 Score = 31.9 bits (69), Expect = 3.5 Identities = 17/69 (24%), Positives = 19/69 (27%) Frame = +2 Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPPXXXXSXXXLXXXXXXXXXXXPPXXPXXXXXXPXX 841 PPPP P G PP + PPP + PP P P Sbjct: 289 PPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPP 348 Query: 842 XXXXPXPXG 868 P G Sbjct: 349 ALLSSAPSG 357 Score = 31.5 bits (68), Expect = 4.6 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +2 Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739 PPPP P GG PP PPP Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPP 302 >AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. Length = 505 Score = 31.9 bits (69), Expect = 3.5 Identities = 17/69 (24%), Positives = 19/69 (27%) Frame = +2 Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPPXXXXSXXXLXXXXXXXXXXXPPXXPXXXXXXPXX 841 PPPP P G PP + PPP + PP P P Sbjct: 289 PPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPP 348 Query: 842 XXXXPXPXG 868 P G Sbjct: 349 ALPSSAPSG 357 Score = 31.5 bits (68), Expect = 4.6 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +2 Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739 PPPP P GG PP PPP Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPP 302 >BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein. Length = 1068 Score = 31.5 bits (68), Expect = 4.6 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +2 Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739 PPPP P GG PP PPP Sbjct: 551 PPPPPPLPGGMLPPPPPPLPPGGPPP 576 >BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein. Length = 1068 Score = 31.5 bits (68), Expect = 4.6 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +2 Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739 PPPP P GG PP PPP Sbjct: 551 PPPPPPLPGGMLPPPPPPLPPGGPPP 576 >BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled associated activator of morphogenesis 2 protein. Length = 662 Score = 31.5 bits (68), Expect = 4.6 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +2 Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739 PPPP P GG PP PPP Sbjct: 145 PPPPPPLPGGMLPPPPPPLPPGGPPP 170 >AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein. Length = 1085 Score = 31.5 bits (68), Expect = 4.6 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +2 Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739 PPPP P GG PP PPP Sbjct: 558 PPPPPPLPGGMLPPPPPPLPPGGPPP 583 >AF343404-1|AAK51400.1| 105|Homo sapiens psoriasis vulgaris immunoglobulin heavy chain protein. Length = 105 Score = 30.7 bits (66), Expect = 8.0 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +2 Query: 215 ESTRAKCGGQRDSFVQEGAGGILRIPSAGAEDQGHRYKG 331 ES + C G R SF G + R+P G E G Y G Sbjct: 5 ESLKISCQGSRYSFSSYWIGWVRRVPGKGLEWMGFIYPG 43 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 96,017,811 Number of Sequences: 237096 Number of extensions: 1973918 Number of successful extensions: 6992 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3960 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5586 length of database: 76,859,062 effective HSP length: 90 effective length of database: 55,520,422 effective search space used: 12325533684 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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