Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E12
(940 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 33 0.36
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 32 0.48
At2g40890.1 68415.m05046 cytochrome P450 98A3, putative (CYP98A3... 31 0.83
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 31 1.1
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 30 1.9
At3g21130.1 68416.m02670 F-box family protein contains Pfam prof... 29 3.4
At1g24120.1 68414.m03043 DNAJ heat shock protein, putative simil... 29 3.4
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 29 4.4
At3g15000.1 68416.m01897 expressed protein similar to DAG protei... 29 5.9
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 28 7.8
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 28 7.8
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P P PPP P PPP P
Sbjct: 576 PPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPPPPPPP 625
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P P PPP P PPP P
Sbjct: 595 PPPRPPPPPPPPPSSRSIPSPSAPPPPPPPPPSFGSTGNKRQAQPPPPPP 644
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P + P P PPP P PPP P
Sbjct: 578 PPPPLPSRSIPPPLA-QPPPPRPPPPPPPPPSSRSIPSPSAPPPPPPPPP 626
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P P PPP P PPP P
Sbjct: 381 PPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPP 430
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P PPP P PPP P
Sbjct: 391 PPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSP 440
>At2g40890.1 68415.m05046 cytochrome P450 98A3, putative (CYP98A3)
identical to Cytochrome P450 98A3 (SP|O22203)
[Arabidopsis thaliana]; similar to gi:17978651 from
Pinus taeda
Length = 508
Score = 31.5 bits (68), Expect = 0.83
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 267 VQEVFFEFPQPEQKIKGIAIKDLENGLAEPSITRGGLGFNFVNIK-LKSDRGSGFKFVI 440
V+ VF + PE + KG+ ++ +A +ITR G F+N + + ++G FK ++
Sbjct: 151 VESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAEGVVDEQGLEFKAIV 209
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PPPP P GG PP PPP
Sbjct: 679 PPPPPPPPGGGPPPPPGGGPPPPPPP 704
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PPPP P GG PP PPP
Sbjct: 680 PPPPPPPGGGPPPPPGGGPPPPPPPP 705
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/84 (25%), Positives = 21/84 (25%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXPXXXXXXSXXF 842
PPP P P P P PPP P PPP P S
Sbjct: 410 PPPPAPIFSTP-PTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPP 468
Query: 843 XXXFXXPGGXXXXXPXPXXXPXXP 914
P P P P P
Sbjct: 469 PPPPPPPPPPVYSPPPPSPPPPPP 492
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P PPP P PPP P
Sbjct: 453 PPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPP 502
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P P PP P PPP P
Sbjct: 454 PPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPP 503
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P PPP P PPP P
Sbjct: 467 PPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPP 516
>At3g21130.1 68416.m02670 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 367
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 251 SFVQEGAGGILRIPSAGAEDQGHRYKGPREWLGRAVDHP 367
S++ +G G L IPS G +G KG WL D P
Sbjct: 189 SWLVDGVAGGLFIPSIGTRRRGLSVKGNTYWLALTEDGP 227
>At1g24120.1 68414.m03043 DNAJ heat shock protein, putative similar
to Altered Response to Gravity [Arabidopsis thaliana]
GI:4249662; contains Pfam profile PF00226 DnaJ domain
Length = 436
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 485 RLQLISQTLFSRVYFDXKLEAGSSIALQFDVDEVKAQSSSGDRRLG 348
R++ S++ F +YFD + +G S+ALQ D +S+G LG
Sbjct: 177 RVESSSKSKFKLLYFDQEANSGLSLALQEDSKRTGKITSAGMYFLG 222
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 663 PPPXXPXXGXXXPXXXKXPXPXXPPPXXXXPKXXXXXXXXXXXXXPPPXP 812
PPP P P P PPP P PPP P
Sbjct: 616 PPPPPPVHSPPPPVFSPPPPVHSPPPPVYSPPPPVYSPPPPPVKSPPPPP 665
>At3g15000.1 68416.m01897 expressed protein similar to DAG protein
(required for chloroplast differentiation and palisade
development) GB:Q38732 [Antirrhinum majus]
Length = 395
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 665 PPPXPXXGGXXPPXXKXXXXXXPPP 739
PPP P GG PP PPP
Sbjct: 251 PPPPPHIGGSAPPPPHMGGSAPPPP 275
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PP P P GG PP PPP
Sbjct: 390 PPAPPPGSGGPKPPPPPGPKGPRPPP 415
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 662 PPPPXPXXGGXXPPXXKXXXXXXPPP 739
PP P P GG PP PPP
Sbjct: 390 PPAPPPGSGGPKPPPPPGPKGPRPPP 415
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,807,166
Number of Sequences: 28952
Number of extensions: 293907
Number of successful extensions: 1310
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2246578488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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