Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E11
(977 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 41 2e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.007
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.020
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.046
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.75
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 0.75
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.00
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 2.8
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 4.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 5.3
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 5.3
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 5.3
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 26 7.0
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 26 9.3
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 9.3
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.1 bits (92), Expect = 2e-04
Identities = 35/132 (26%), Positives = 39/132 (29%), Gaps = 2/132 (1%)
Frame = +2
Query: 581 PXPPXXSFYFXXSXGXGGXGXSPXXTXPAPPPGERAXXXFGPPXRXPPPPXPPAPXXLXX 760
P PP S G + P PPP A P + P PP P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 761 XGPRFPSXPQGGXXXFPPXPGGXPXQKPFSPXXPRXPPXNRXXGRLXPXXP-PPXXPPXX 937
G + P PP P P P P PP P P PP PP
Sbjct: 372 TGRQPPPLSSSRAVSNPPAP---PPAIP-GRSAPALPPLGNASRTSTPPVPTPPSLPPSA 427
Query: 938 XP-XXRGAPPGV 970
P APP +
Sbjct: 428 PPSLPPSAPPSL 439
Score = 39.5 bits (88), Expect = 7e-04
Identities = 32/105 (30%), Positives = 33/105 (31%)
Frame = +2
Query: 647 PXXTXPAPPPGERAXXXFGPPXRXPPPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPXPGG 826
P + PA PP A PP PP P AP L PS P P P G
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP------PSAP-------PSLPMG 442
Query: 827 XPXQKPFSPXXPRXPPXNRXXGRLXPXXPPPXXPPXXXPXXRGAP 961
P P P P PP P P PP AP
Sbjct: 443 APAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 31.5 bits (68), Expect = 0.19
Identities = 32/125 (25%), Positives = 34/125 (27%), Gaps = 10/125 (8%)
Frame = +2
Query: 617 SXGXGGXGXSPXXTXPAPPPGERAXXXFGPPXRXPPP---------PXPPAPXXLXXXGP 769
S G P PPP R+ G R PPP P P P P
Sbjct: 345 SNAAGSIPLPPQGRSAPPPPPPRSAPSTG---RQPPPLSSSRAVSNPPAPPPAIPGRSAP 401
Query: 770 RFPSXPQGGXXXFPPXPGGXPXQKPFSPXXPRXPPXNRXXGRLXPXXPP-PXXPPXXXPX 946
P PP P P P P + G P PP P P P
Sbjct: 402 ALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMG--APAAPPLPPSAPIAPPL 459
Query: 947 XRGAP 961
G P
Sbjct: 460 PAGMP 464
Score = 30.7 bits (66), Expect = 0.33
Identities = 26/90 (28%), Positives = 29/90 (32%)
Frame = +2
Query: 662 PAPPPGERAXXXFGPPXRXPPPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPXPGGXPXQK 841
P PPP R + PPP PP P P P PP P P +
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPP-PPPPSRRNRGKP--PIGNGSSNSSLPPPP--PPPRS 345
Query: 842 PFSPXXPRXPPXNRXXGRLXPXXPPPXXPP 931
+ P P GR P PPP P
Sbjct: 346 NAAGSIPLPP-----QGRSAPPPPPPRSAP 370
Score = 30.7 bits (66), Expect = 0.33
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 859 PKXPTPXPXPXAAXXXXPPPXXPPXXPXXSPXXPP 963
P PTP P +A PP PP P +P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSA-PPSLPMGAPAAPP 448
Score = 29.5 bits (63), Expect = 0.75
Identities = 20/63 (31%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = +1
Query: 769 PVSFPP--PGXXLXFSPXXXGXPPXKTLFPXXPKX-PTPXPXPXAAXXXXPPPXXPPXXP 939
P S PP P +P PP + P P P P P AA P P P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Query: 940 XXS 948
S
Sbjct: 488 VAS 490
Score = 28.3 bits (60), Expect = 1.7
Identities = 30/110 (27%), Positives = 33/110 (30%), Gaps = 7/110 (6%)
Frame = +2
Query: 656 TXPAPPPGERAXXXFGPPXRXP------PPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPX 817
T + PP + PP R P PPP PP P P P
Sbjct: 225 TSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP---IAPVSMN 281
Query: 818 PGGXPXQKPFSPXXPRXPPXNR-XXGRLXPXXPPPXXPPXXXPXXRGAPP 964
P KP P PP +R L P PP RG PP
Sbjct: 282 PAINSTSKP-----PLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/63 (26%), Positives = 21/63 (33%)
Frame = +2
Query: 644 SPXXTXPAPPPGERAXXXFGPPXRXPPPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPXPG 823
+P P+ PP PP P PP P + P P+ P PP P
Sbjct: 427 APPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP-----PPAPA 481
Query: 824 GXP 832
P
Sbjct: 482 PAP 484
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.007
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 829 PPXKTLFPXXPKXPTPXPXPXAAXXXXPPPXXPPXXPXXSPXXPP 963
PP + P P P P P PPP PP P PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 31.1 bits (67), Expect = 0.25
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = +2
Query: 722 PPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPXPGGXPXQKPFSPXXPRXPPXNRXXGRLX 901
PPP PPA P P PP P P P P PP G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 902 PXXPPPXXPP 931
P P P
Sbjct: 792 YYAPAPQAEP 801
Score = 30.7 bits (66), Expect = 0.33
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 3/68 (4%)
Frame = +2
Query: 647 PXXTXPAPPPGERAXXXFGPPXRXPPPPXPP---APXXLXXXGPRFPSXPQGGXXXFPPX 817
P P P P P PPPP PP A P P+ GG + P
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPA 796
Query: 818 PGGXPXQK 841
P P K
Sbjct: 797 PQAEPEPK 804
Score = 29.9 bits (64), Expect = 0.57
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 644 SPXXTXPAPPPGERAXXXFGPPXRXPPPP 730
+P P PPP GPP PPPP
Sbjct: 755 APIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 1.00
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = +1
Query: 781 PPPGXXLXFSPXXXGXP-PXKTLFPXXPKXPTPXPXPXAAXXXXPPPXXPPXXPXXS 948
PPP P P P P P P P P A PPP PP P S
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP--PPPPPAVS 786
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/56 (35%), Positives = 21/56 (37%)
Frame = +2
Query: 665 APPPGERAXXXFGPPXRXPPPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPXPGGXP 832
+PPP A P P P PPAP GP P P G PP P P
Sbjct: 731 SPPPPPPAVIV-PTPAPAPIPVPPPAP---IMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +2
Query: 719 PPPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPXPGGXPXQKPFSPXXPRXPP 874
PPPP P P P P G PP P G P P P PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP--PPPPPPPP 783
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.020
Identities = 31/115 (26%), Positives = 35/115 (30%), Gaps = 9/115 (7%)
Frame = +2
Query: 647 PXXTXPAPPPGERAXXXFGPPXRXPPPPXPPA---PXXLXXXGPRFPSXPQGGXXXFPPX 817
P P P A P PP P P P + P P P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPK-PSVAAPPVPAP 1155
Query: 818 PGGXPXQKPF--SPXXPRX----PPXNRXXGRLXPXXPPPXXPPXXXPXXRGAPP 964
G P KP +P P PP + + P PP PP P G PP
Sbjct: 1156 SGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSV-GVPP 1209
Score = 32.3 bits (70), Expect = 0.11
Identities = 30/112 (26%), Positives = 34/112 (30%), Gaps = 6/112 (5%)
Frame = +2
Query: 647 PXXTXPAPP-PGERAXXXFGPPXRXPPPPX-----PPAPXXLXXXGPRFPSXPQGGXXXF 808
P + APP P P PP P P AP + PS P
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP 1084
Query: 809 PPXPGGXPXQKPFSPXXPRXPPXNRXXGRLXPXXPPPXXPPXXXPXXRGAPP 964
P P G P P PP + + P P PP P APP
Sbjct: 1085 VPAPSGIP---PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSV-AAPP 1132
Score = 29.1 bits (62), Expect = 1.00
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Frame = +2
Query: 644 SPXXTXPAPPPGERAXXXFGPPXRXPPPPXPPA---PXXLXXXGPRFPSXPQGGXXXFPP 814
+P P P P A P PP P P A P P P P G PP
Sbjct: 1154 APSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK-PSVGVPPVPP 1212
Query: 815 XPGGXPXQKPFSPXXPRXPP 874
P P + P P
Sbjct: 1213 PSTAPPVPTPSAGLPPVPVP 1232
Score = 29.1 bits (62), Expect = 1.00
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = +1
Query: 754 SXXGXPVSFPPPGXXLXFSPXXXGXPPXKTLFPXXPKXPTPXPXPXAAXXXXPPPXXPPX 933
S PV P G P G PP P P P P PPP P
Sbjct: 1165 SVAAPPVPAPSSGIPPVPKPAA-GVPPVPP-----PSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 934 XPXXSPXXPP 963
P S PP
Sbjct: 1219 VPTPSAGLPP 1228
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = +1
Query: 811 PXXXGXPPXKTLFPXXPKXPTPXPXPXAAXXXXPPPXXPPXXPXXSPXXP 960
P PP P P P P P + P P P P S P
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/81 (24%), Positives = 22/81 (27%)
Frame = +2
Query: 722 PPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPXPGGXPXQKPFSPXXPRXPPXNRXXGRLX 901
PPP P + + P PP P P PP G
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG--A 1120
Query: 902 PXXPPPXXPPXXXPXXRGAPP 964
P P P P GAPP
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPP 1141
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.5 bits (73), Expect = 0.046
Identities = 23/81 (28%), Positives = 25/81 (30%), Gaps = 6/81 (7%)
Frame = +2
Query: 707 PXRXPPPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPXPGGXP-----XQKPFSPXXP-RX 868
P P PP P + P PS P PP P P P P P +
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 869 PPXNRXXGRLXPXXPPPXXPP 931
PP P PP PP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPP 204
Score = 29.9 bits (64), Expect = 0.57
Identities = 23/91 (25%), Positives = 27/91 (29%)
Frame = +2
Query: 647 PXXTXPAPPPGERAXXXFGPPXRXPPPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPXPGG 826
P P P E PP PPP P + + P PS P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPS-----SLPPPAQPAA 179
Query: 827 XPXQKPFSPXXPRXPPXNRXXGRLXPXXPPP 919
P +P P P + P PPP
Sbjct: 180 PVKSPPSAPSLPSAVPP------MPPKVPPP 204
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +2
Query: 647 PXXTXPAPPPGERAXXXFGPPXRXPPPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPXP 820
P APP +A P PPP P AP P PS PP P
Sbjct: 151 PPSPASAPPIPSKAPPI---PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/70 (25%), Positives = 20/70 (28%)
Frame = +1
Query: 754 SXXGXPVSFPPPGXXLXFSPXXXGXPPXKTLFPXXPKXPTPXPXPXAAXXXXPPPXXPPX 933
S P S P P PP ++ P P P P PP P
Sbjct: 119 SASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPA 178
Query: 934 XPXXSPXXPP 963
P SP P
Sbjct: 179 APVKSPPSAP 188
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1
Query: 850 PXXPKXPTPXPXPXAAXXXXPPPXXPPXXPXXSPXXPPR 966
P P PTP P P PP P +P P +
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSK 163
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.75
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 662 PAPPPGERAXXXFGPPXRXPPPPXP 736
P PPPG F PP + PPPP P
Sbjct: 12 PPPPPG------FEPPSQPPPPPPP 30
Score = 25.4 bits (53), Expect(2) = 1.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 704 PPXRXPPPPXPP 739
PP PPPP PP
Sbjct: 5 PPGNPPPPPPPP 16
Score = 21.4 bits (43), Expect(2) = 1.3
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 722 PPPXPPAPXXLXXXGPRFPSXP 787
PPP PP P P P P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.5 bits (63), Expect = 0.75
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +1
Query: 859 PKXPTPXPXPXAAXXXXPPPXXPPXXPXXSPXXPP 963
P PTP P P A PPP PP SP PP
Sbjct: 729 PAPPTPAPTP--AVKHHPPP--PPVRSSISPSMPP 759
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 1.00
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 850 PXXPKXPTPXPXPXAAXXXXPPPXXPPXXPXXSPXXPP 963
P PTP P P + PPP P P P PP
Sbjct: 1699 PPQMSAPTPPPPPMSV----PPPPSAPPMPAGPPSAPP 1732
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +2
Query: 647 PXXTXPAPPPGERAXXXFGPPXRXPPPPXPPAPXXLXXXGPRFPSXPQGG 796
P + P PPP + PP P P PP+ PS P G
Sbjct: 1700 PQMSAPTPPPPPMSVPP--PPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/61 (26%), Positives = 17/61 (27%)
Frame = +2
Query: 662 PAPPPGERAXXXFGPPXRXPPPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPXPGGXPXQK 841
P P R P P PP PP P P+ P PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP--PPLPASSAPSV 1743
Query: 842 P 844
P
Sbjct: 1744 P 1744
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = +2
Query: 647 PXXTXPAPPPGERAXXXFGPPXRXPPPP-XPPAP 745
P A PP A PP PPPP PP P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 26.2 bits (55), Expect = 7.0
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Frame = +1
Query: 769 PVSFPPPGXXLXFSPXXXGXPPXKTLFPXXPKXPTPXPXPXAAXXXXPPPXXPPXXPXXS 948
PVS PP P P P P P P PP PP P S
Sbjct: 1686 PVSTPP------VRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASS 1739
Query: 949 -PXXPPRG 969
P P G
Sbjct: 1740 APSVPNPG 1747
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/74 (29%), Positives = 24/74 (32%), Gaps = 5/74 (6%)
Frame = +2
Query: 668 PPPGERAXXXFGPPXRXP----PPPXPPAPXXLXXXGPRFPS-XPQGGXXXFPPXPGGXP 832
PPP A GPP P PP PPA P P+ P G P P
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTGKETAVPL-SSMP 1941
Query: 833 XQKPFSPXXPRXPP 874
P + PP
Sbjct: 1942 NAPPSVASNAKLPP 1955
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 24.2 bits (50), Expect(2) = 2.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 722 PPPXPPAPXXLXXXGPRFPS 781
PPP PP P + G +F S
Sbjct: 945 PPPPPPPPPLVSAAGGKFVS 964
Score = 21.4 bits (43), Expect(2) = 2.8
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 704 PPXRXPPPPXPP 739
P PPPP PP
Sbjct: 942 PAFPPPPPPPPP 953
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.1 bits (57), Expect = 4.0
Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 8/73 (10%)
Frame = +2
Query: 722 PPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPXPGG---XPXQK-----PFSPXXPRXPPX 877
PPP P A P P+ G PP G P Q+ P++P P+ P
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVA 967
Query: 878 NRXXGRLXPXXPP 916
P PP
Sbjct: 968 AASRISSSPNMPP 980
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 671 PPGERAXXXFGPPXRXPPPPXPPAP 745
PP A P PPPP PP P
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPP 197
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 927 GXXGGGXXGXSRPXXRXXGGXLGXXGEKGFXXGXPPGXGG 808
G GGG G GG G G G G P G GG
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Score = 25.8 bits (54), Expect = 9.3
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -1
Query: 962 GGXXGXXXGXWGGXXGGGXXXXAAXGXGXGVGXLGXXGKRVFXGG 828
GG G G G G G G G G+G G G F GG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG-GGPGGFGGG 264
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 5.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 707 PXRXPPPPXPPAPXXL 754
P + PPPP PP P L
Sbjct: 218 PVKKPPPPAPPKPRRL 233
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 662 PAPPPGERAXXXFGPPXRXPPPPXP 736
P P G A GPP + PPPP P
Sbjct: 94 PNPANGYAAVYG-GPPSQLPPPPQP 117
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 25.8 bits (54), Expect = 9.3
Identities = 19/76 (25%), Positives = 21/76 (27%), Gaps = 5/76 (6%)
Frame = +2
Query: 719 PPPPXPPAPXXLXXXGPRFPSXPQ-----GGXXXFPPXPGGXPXQKPFSPXXPRXPPXNR 883
PPPP P + P P P G Q+P P P PP
Sbjct: 421 PPPPGFSTNAPKAVKSPEISAPPGLYRGLSSGASIPSAPPGFGYQQPSFPYSPGFPPSAY 480
Query: 884 XXGRLXPXXPPPXXPP 931
R P PP
Sbjct: 481 NQNRTGYGFPDTSRPP 496
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.8 bits (54), Expect = 9.3
Identities = 22/80 (27%), Positives = 26/80 (32%), Gaps = 7/80 (8%)
Frame = +2
Query: 656 TXPAPPPGERAXXXFGPP---XRXPPPPXPPAPXXLXXXGPRFPSXPQGGXXXFPPXP-- 820
T P PP + + GPP P P A P P+ Q P P
Sbjct: 46 TIPPPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPA-PAASQNRAYGAAPQPYP 104
Query: 821 --GGXPXQKPFSPXXPRXPP 874
GG P Q + P P P
Sbjct: 105 PQGGYPQQPYYYPNQPNYYP 124
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,322,059
Number of Sequences: 5004
Number of extensions: 33077
Number of successful extensions: 240
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 503290872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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