Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E11
         (977 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    40   1e-04
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            31   0.040
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   0.38 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   2.0  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 39.5 bits (88), Expect = 1e-04
 Identities = 30/115 (26%), Positives = 34/115 (29%), Gaps = 2/115 (1%)
 Frame = +2

Query: 632 GXGXSPXXTXPAPPPGERAXXXFGPPXRXPPPPXPPAPXXLXXXGPRFPSXPQGGXXXFP 811
           G    P      PPP       F      P P  PP P  +   G   P          P
Sbjct: 152 GPALFPAPISHRPPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQP 211

Query: 812 PXPGGXPXQKPF--SPXXPRXPPXNRXXGRLXPXXPPPXXPPXXXPXXRGAPPGV 970
           P PGG   Q P    P  P+ PP      +      PP       P   G PP +
Sbjct: 212 PRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPI 266



 Score = 27.9 bits (59), Expect = 0.49
 Identities = 26/106 (24%), Positives = 27/106 (25%), Gaps = 1/106 (0%)
 Frame = +2

Query: 647 PXXTXPAPPPGERAXXXFGPPXRXPPPPXPPAPXXLXXXGPRFPSXPQGG-XXXFPPXPG 823
           P    P  PPG       G   R P       P  +    P  P  P GG      P   
Sbjct: 225 PMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNS 284

Query: 824 GXPXQKPFSPXXPRXPPXNRXXGRLXPXXPPPXXPPXXXPXXRGAP 961
                 P     P  PP     G   P  PP    P       G P
Sbjct: 285 NLSGGMPSGMVGPPRPPMPMQGG--APGGPPQGMRPNFYNRPMGDP 328


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 31.5 bits (68), Expect = 0.040
 Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 4/67 (5%)
 Frame = +1

Query: 781 PPPGXXLXFSPXXXGXPPXKTL-FPXXPKXPTPXPXPXA---AXXXXPPPXXPPXXPXXS 948
           PPPG  +   P     PP   L  P  P  P     P          PPP  PP  P   
Sbjct: 534 PPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGP 593

Query: 949 PXXPPRG 969
           P  P  G
Sbjct: 594 PPSPLAG 600



 Score = 29.1 bits (62), Expect = 0.21
 Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 3/70 (4%)
 Frame = +2

Query: 764 GPRFPSXPQGGXXXFPP---XPGGXPXQKPFSPXXPRXPPXNRXXGRLXPXXPPPXXPPX 934
           GP  P  P G     PP    P     + PF P  P           L    PPP  PP 
Sbjct: 529 GPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPP- 587

Query: 935 XXPXXRGAPP 964
             P   G PP
Sbjct: 588 --PPPMGPPP 595



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 19/67 (28%), Positives = 20/67 (29%)
 Frame = +1

Query: 769 PVSFPPPGXXLXFSPXXXGXPPXKTLFPXXPKXPTPXPXPXAAXXXXPPPXXPPXXPXXS 948
           P  F PP   L  +P     P         P  P   P P  A    PP   PP      
Sbjct: 544 PPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPP--APPPPPPMGPPPSPLAGG 601

Query: 949 PXXPPRG 969
           P   P G
Sbjct: 602 PLGGPAG 608



 Score = 26.2 bits (55), Expect = 1.5
 Identities = 27/92 (29%), Positives = 30/92 (32%), Gaps = 2/92 (2%)
 Frame = +2

Query: 623 GXGGXGXSPXXTXPAPPPGERAXXXFGPPXRXPPP-PXPPAP-XXLXXXGPRFPSXPQGG 796
           G  G   +     P PPP         PP   PPP     AP   L     RFP+     
Sbjct: 517 GYDGRDLTGGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPA----- 571

Query: 797 XXXFPPXPGGXPXQKPFSPXXPRXPPXNRXXG 892
              FP  P   P   P  P  P  PP +   G
Sbjct: 572 --GFPNLPNAQPPPAP-PPPPPMGPPPSPLAG 600



 Score = 25.8 bits (54), Expect = 2.0
 Identities = 26/105 (24%), Positives = 26/105 (24%)
 Frame = +2

Query: 464 GXLGPPPXXXXGKKXXFWXXXXPXXLXXDPXXTXPIXXXPXPPXXSFYFXXSXGXGGXGX 643
           G LGPPP    G          P      P         P  P     F           
Sbjct: 526 GPLGPPPPPPPGGAVL----NIPPQFLPPPLNLLRAPFFPLNPA-QLRFPAGFPNLPNAQ 580

Query: 644 SPXXTXPAPPPGERAXXXFGPPXRXPPPPXPPAPXXLXXXGPRFP 778
            P    P PP G       G P   P    PP P  L   G   P
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 25.4 bits (53), Expect = 2.6
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = +1

Query: 859 PKXPTPXPXPXAAXXXXPPPXXPP 930
           P  P P P P  A    PP   PP
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPP 550



 Score = 25.0 bits (52), Expect = 3.4
 Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
 Frame = +2

Query: 662 PAPPPGERAXXXFGPPXRXPPPPXPPAPXXLXXXGPRFPSXPQGGXXXF-PPXP 820
           P  P   R    F       PPP PP P  +          P GG     PP P
Sbjct: 561 PLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +1

Query: 868 PTPXPXPXAAXXXXPPPXXPPXXPXXSPXXPPR 966
           P+P     A     PPP  PP     SP   PR
Sbjct: 769 PSPSRSAFADGIGSPPPPPPPPPSSLSPGGVPR 801



 Score = 25.8 bits (54), Expect(2) = 0.38
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 719 PPPPXPPAPXXLXXXGPRFPSXPQ 790
           PPPP PP P  L   G   P+  Q
Sbjct: 783 PPPPPPPPPSSLSPGGVPRPTVLQ 806



 Score = 20.6 bits (41), Expect(2) = 0.38
 Identities = 11/38 (28%), Positives = 11/38 (28%)
 Frame = +2

Query: 617 SXGXGGXGXSPXXTXPAPPPGERAXXXFGPPXRXPPPP 730
           S G      S   T    P         G P   PPPP
Sbjct: 753 SNGSSSTASSSVSTGMPSPSRSAFADGIGSPPPPPPPP 790


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
 Frame = +1

Query: 769 PVSFPPPGXXLXFSPXXXGXPPXKTLFPXXPKXPTPXPXPXAAXXXXPPP---XXPPXXP 939
           P +  PP   +   P     PP   + P  P  P   P         PPP     PP   
Sbjct: 66  PFTAGPPKPNISIPPPTMNMPPRPGMIPGMPGAP---PLLMGPNGPLPPPMMGMRPPPMM 122

Query: 940 XXSPXXPPRG 969
             +   PP G
Sbjct: 123 VPTMGMPPMG 132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,642
Number of Sequences: 2352
Number of extensions: 11910
Number of successful extensions: 59
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106885740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)