Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E08
         (953 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            34   0.007
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    27   1.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   4.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 33.9 bits (74), Expect = 0.007
 Identities = 19/71 (26%), Positives = 19/71 (26%)
 Frame = +3

Query: 558 PCRTPTXXTPXRXTXXPXPPXPXPPQXXXXPPXXXXXPXXXXXPXXXPXXXXXXPXPXPX 737
           P   P    P        P    PP      P     P     P   P      P P P 
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPP 586

Query: 738 PXPPPXPPXXP 770
           P PP  PP  P
Sbjct: 587 PPPPMGPPPSP 597


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 435 CXWWRXWW 458
           C WWR WW
Sbjct: 7   CWWWRWWW 14


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 13/49 (26%), Positives = 13/49 (26%)
 Frame = +3

Query: 606 PXPPXPXPPQXXXXPPXXXXXPXXXXXPXXXPXXXXXXPXPXPXPXPPP 752
           P P    PP     PP     P     P          P P     PPP
Sbjct: 72  PKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPP 120



 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/36 (30%), Positives = 11/36 (30%)
 Frame = +1

Query: 583 PXPGXXXPPXPPXXXPXKXXXTPPXPXXXPXXXXXP 690
           P P    PP P    P      PP P   P     P
Sbjct: 64  PNPFTAGPPKPNISIPPPTMNMPPRPGMIPGMPGAP 99


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,878
Number of Sequences: 2352
Number of extensions: 7800
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104603103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)