Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E07
         (881 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g08650.1 68418.m01029 GTP-binding protein LepA, putative            35   0.063
At1g10385.1 68414.m01170 hypothetical protein                          31   0.77 
At5g49830.1 68418.m06171 expressed protein                             30   1.8  
At2g25650.1 68415.m03074 DNA-binding storekeeper protein-related...    29   3.1  

>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
          Length = 681

 Score = 35.1 bits (77), Expect = 0.063
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
 Frame = +2

Query: 464 LSRESLDNHDVEAERAXEXRKN--KLHLITEKVESCMNLLDVP---------DRTLLH-E 607
           +  + LDN D+E ER    +    ++  + E    C+NL+D P          R+L   E
Sbjct: 118 MKEQFLDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACE 177

Query: 608 GDLLEIDAEENTAXQRMLXIYL 673
           G LL +DA +    Q +  +YL
Sbjct: 178 GALLVVDASQGVEAQTLANVYL 199


>At1g10385.1 68414.m01170 hypothetical protein
          Length = 754

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +1

Query: 277 LAEETASALKKNVYENYMXFIETATEISHL 366
           L + +A  ++K+VY NY  FI T+ EIS L
Sbjct: 65  LKKASAEEMRKSVYANYAAFIRTSKEISAL 94


>At5g49830.1 68418.m06171 expressed protein
          Length = 752

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 274 NLAEETASALKKNVYENYMXFIETATEISHL 366
           +L   +A  ++++VY NY  FI T+ EIS L
Sbjct: 58  DLKRASAEEMRRSVYANYPAFIRTSKEISDL 88


>At2g25650.1 68415.m03074 DNA-binding storekeeper protein-related
           contains similarity to storekeeper protein [Solanum
           tuberosum] gi|14268476|emb|CAC39398; contains PF04504:
           Protein of unknown function, DUF573
          Length = 386

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = +2

Query: 449 GNENGLSRESLDNHDVEAERAXEXRKNKLHLITEKVESCMNLLDVPDRTLLHEGDLLEID 628
           GN++G+ +E +  HDV    A E   N    I ++ ES   +L   + T L+E    EI 
Sbjct: 164 GNDDGMDKEMVKEHDVNGNGAAE---NGTARIAQENESGEEMLKEHEET-LNENGAEEIR 219

Query: 629 AEENTA 646
             + TA
Sbjct: 220 DNDETA 225


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,102,947
Number of Sequences: 28952
Number of extensions: 153818
Number of successful extensions: 299
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2077687200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)