Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E05
(948 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 296 1e-80
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 183 2e-46
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 171 6e-43
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 113 1e-25
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 113 1e-25
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 112 4e-25
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 112 4e-25
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 103 1e-22
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 96 3e-20
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 85 9e-17
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 85 9e-17
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 82 5e-16
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 71 1e-12
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 67 2e-11
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 66 3e-11
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 66 3e-11
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 62 7e-10
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 61 1e-09
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 61 1e-09
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 58 9e-09
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 56 3e-08
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 46 4e-05
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 46 5e-05
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 35 0.074
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF016678-9|AAB66155.1| 155|Caenorhabditis elegans Hypothetical ... 30 2.1
Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ... 29 6.4
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 296 bits (727), Expect = 1e-80
Identities = 129/162 (79%), Positives = 150/162 (92%)
Frame = +3
Query: 168 QSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKE 347
QSSLLLKKQLA++ + PV+GFSAGL+DDNDIYKWEVL+IGPPDTLYEGGFFKA L+FP++
Sbjct: 3 QSSLLLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRD 62
Query: 348 YPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISV 527
YP +PP+MKF++EIWHPNIDK G+VCISILH+PGDDKWGYE+ ERWLPVHTVETIL+SV
Sbjct: 63 YPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSV 122
Query: 528 ISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQED 653
ISML DPN ESPANVDAAK RE Y+EFKKKVA+CVR+SQE+
Sbjct: 123 ISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRRSQEE 164
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 183 bits (445), Expect = 2e-46
Identities = 82/154 (53%), Positives = 108/154 (70%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L + EL P EG A ID+++ ++WE LI GP +T + G F A + FP++YPL P
Sbjct: 9 LMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPLSP 68
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P+M+F I+HPNI +G VCISILH PGDD GYE ++ERW PV ++E IL+SV+SMLA
Sbjct: 69 PKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSMLA 128
Query: 543 DPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 644
+PNDESPANV AAK WRE ++F+K VRK+
Sbjct: 129 EPNDESPANVSAAKMWREDRAQFEKIADSLVRKT 162
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 171 bits (416), Expect = 6e-43
Identities = 81/160 (50%), Positives = 109/160 (68%), Gaps = 4/160 (2%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L +L L PVEGF+ + +DN ++ W V I GPP TLY+GG+FKA + FP YP P
Sbjct: 15 LTMELKNLQSQPVEGFTIDVNEDN-LFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSP 73
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P MKF T++WHPN+ +NGD+CISILH P DD E A ERW P +V TIL+SVIS+L
Sbjct: 74 PSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTILLSVISLLN 133
Query: 543 DPNDESPANVDAA---KEWRE-RYSEFKKKVARCVRKSQE 650
+PN SPANVDA+ ++W+E + E+ K V + V +S++
Sbjct: 134 EPNTSSPANVDASVMYRKWKEDQDPEYAKIVTKQVEESKK 173
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 113 bits (273), Expect = 1e-25
Identities = 52/149 (34%), Positives = 90/149 (60%), Gaps = 3/149 (2%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
++K+L +L ++P SAG + D D++ W+ I+GPP++ Y+GG F ++FP +YP +P
Sbjct: 6 IQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKP 64
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P++ F T I+HPNI+ NG +C+ IL +W P T+ +L+S+ S+L
Sbjct: 65 PKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLC 111
Query: 543 DPNDESPANVDAAKEW---RERYSEFKKK 620
DPN + P + A+ + RERY++ ++
Sbjct: 112 DPNPDDPLVPEIARIYKTDRERYNQLARE 140
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 113 bits (273), Expect = 1e-25
Identities = 52/149 (34%), Positives = 90/149 (60%), Gaps = 3/149 (2%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
++K+L +L ++P SAG + D D++ W+ I+GPP++ Y+GG F ++FP +YP +P
Sbjct: 6 IQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKP 64
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P++ F T I+HPNI+ NG +C+ IL +W P T+ +L+S+ S+L
Sbjct: 65 PKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLC 111
Query: 543 DPNDESPANVDAAKEW---RERYSEFKKK 620
DPN + P + A+ + RERY++ ++
Sbjct: 112 DPNPDDPLVPEIARIYKTDRERYNQLARE 140
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 112 bits (269), Expect = 4e-25
Identities = 57/154 (37%), Positives = 89/154 (57%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L + +L ++P G S +DN I WE +I GP +T +E G FK L F +EYP +P
Sbjct: 9 LMRDFKKLQEDPPAGVSGAPTEDN-ILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKP 67
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P +KF+++++HPN+ +G +C+ IL RW P + V IL S+ S+L
Sbjct: 68 PTVKFISKMFHPNVYADGSICLDIL-------------QNRWSPTYDVAAILTSIQSLLD 114
Query: 543 DPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 644
+PN SPAN AA+ ++E E++K+V + V +S
Sbjct: 115 EPNPNSPANSLAAQLYQENRREYEKRVQQIVEQS 148
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 112 bits (269), Expect = 4e-25
Identities = 57/154 (37%), Positives = 89/154 (57%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L + +L ++P G S +DN I WE +I GP +T +E G FK L F +EYP +P
Sbjct: 9 LMRDFKKLQEDPPAGVSGAPTEDN-ILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKP 67
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P +KF+++++HPN+ +G +C+ IL RW P + V IL S+ S+L
Sbjct: 68 PTVKFISKMFHPNVYADGSICLDIL-------------QNRWSPTYDVAAILTSIQSLLD 114
Query: 543 DPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 644
+PN SPAN AA+ ++E E++K+V + V +S
Sbjct: 115 EPNPNSPANSLAAQLYQENRREYEKRVQQIVEQS 148
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 103 bits (248), Expect = 1e-22
Identities = 51/140 (36%), Positives = 81/140 (57%)
Frame = +3
Query: 189 KQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPR 368
K+ L +PV G SA + N Y + V+I GP D+ + GG FK L P+EYP+ P+
Sbjct: 11 KETQRLLADPVPGISANPDESNARY-FHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPK 69
Query: 369 MKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADP 548
++F+T+I+HPNIDK G +C+ IL ++W P + T+L+S+ ++L+ P
Sbjct: 70 VRFMTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAP 116
Query: 549 NDESPANVDAAKEWRERYSE 608
N E P D A++W+ +E
Sbjct: 117 NPEDPLATDVAEQWKTNEAE 136
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 96.3 bits (229), Expect = 3e-20
Identities = 46/156 (29%), Positives = 83/156 (53%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L+K+L +L V+ + ++ ++ KW VL+I P Y G FK + FP +YP +P
Sbjct: 7 LQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKP 65
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P++ F T+I+HPN+D+ G C+ I+ +E W P E ++++++S++
Sbjct: 66 PKVAFETKIYHPNVDEEGKFCLPIV------------TAENWKPATKTEQVMMALLSLIN 113
Query: 543 DPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQE 650
+P P D A+E+++ + +F K RK E
Sbjct: 114 EPEPSHPIRADVAEEFQKDHKKFMKTAEEHTRKHAE 149
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 84.6 bits (200), Expect = 9e-17
Identities = 39/125 (31%), Positives = 71/125 (56%)
Frame = +3
Query: 255 DIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISI 434
+++ WE I G DT++EGG ++ + F ++P PP+ KF ++HPN+ +G VC+S+
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 435 LHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFK 614
L E D W P +++ +LI + +L PN E PA +A + + + +E++
Sbjct: 97 LDENKD-----------WKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYE 145
Query: 615 KKVAR 629
K+V +
Sbjct: 146 KRVKK 150
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 84.6 bits (200), Expect = 9e-17
Identities = 39/125 (31%), Positives = 71/125 (56%)
Frame = +3
Query: 255 DIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISI 434
+++ WE I G DT++EGG ++ + F ++P PP+ KF ++HPN+ +G VC+S+
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 435 LHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFK 614
L E D W P +++ +LI + +L PN E PA +A + + + +E++
Sbjct: 97 LDENKD-----------WKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYE 145
Query: 615 KKVAR 629
K+V +
Sbjct: 146 KRVKK 150
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 82.2 bits (194), Expect = 5e-16
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +3
Query: 279 IIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNI-DKNGDVCISILHEPGDD 455
I GPPDT Y GG F + P +YP PP +KF T+IWHPN+ + G +C+ IL
Sbjct: 43 IRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDIL------ 96
Query: 456 KWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFK 614
++W T+ T+L+S+ +++ P + P + AK++ E+ + FK
Sbjct: 97 -------KDQWAASLTLRTVLLSIQALMCTPEPKDPQDAVVAKQYMEKPAVFK 142
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 79.4 bits (187), Expect = 3e-15
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +3
Query: 276 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDD 455
L + P + +Y GG F+ + P EY PP +K +T++WHPNI+++G +C+SIL + D
Sbjct: 63 LTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLD 122
Query: 456 KWGYEKASERWLPVHTVETILISVISMLADPNDESPA-NVDAAKEWRERYSEFKKKVARC 632
++G W P + ++ ++S+ D D + A N+ AA+ W + F +V
Sbjct: 123 QYG-------WRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREY 175
Query: 633 VRK 641
+ +
Sbjct: 176 ISR 178
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 70.9 bits (166), Expect = 1e-12
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSA-GLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLR 359
L K+LA+L EG ND+ +W++ ++G TLY G F F +YP
Sbjct: 9 LMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPFN 68
Query: 360 PPRMKFVTEI--WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVIS 533
P + FV E HP+I NG +C+SIL S+ W P +V+++ +S++S
Sbjct: 69 SPEVMFVGETIPAHPHIYSNGHICLSIL-------------SDDWTPALSVQSVCLSILS 115
Query: 534 MLADPNDESPANVDA 578
ML+ ++ DA
Sbjct: 116 MLSSSKEKKHPIDDA 130
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 70.1 bits (164), Expect = 2e-12
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
Frame = +3
Query: 183 LKKQLAELNKNP---VEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYP 353
++K++A+L KN ++ F + DI++++++ G LY+ F L+ EYP
Sbjct: 18 IRKEIADLAKNKRRFIKDFRK-IEKCKDIFQFKIIGDG---VLYKNMIFTLTLDVNVEYP 73
Query: 354 LRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
+PP +KF ++HPN+D ++C +L + E W P T+E +L+++I
Sbjct: 74 FKPPYLKFCHNVYHPNVDPVTCELCSPMLLQ------------ENWKPETTMEDVLLNLI 121
Query: 531 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRK 641
+L +P+ P N+DAA ++ EF KK +K
Sbjct: 122 VLLNEPDLSRPVNIDAAHDYIHNKVEFVKKSTELAKK 158
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 66.9 bits (156), Expect = 2e-11
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 4/158 (2%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L K+ EL + P E + A ++DN +++W I G T +EGG + + FP +YP++P
Sbjct: 15 LMKEAMEL-RQPTEMYHAQPMEDN-LFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKP 72
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P + +T + + N VC+SI GY E WLP ++ T L+++I L
Sbjct: 73 PNLILLTP--NGRFELNKKVCLSIS--------GYH--PETWLPSWSIRTALLALIGFLP 120
Query: 543 DPNDESPANVDAAKEWRERYS----EFKKKVARCVRKS 644
+ ++D + R+R + E+K K CV K+
Sbjct: 121 STPGGALGSLDYPPKERQRLAKLSCEWKCKECGCVMKT 158
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 66.5 bits (155), Expect = 3e-11
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Frame = +3
Query: 243 IDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRM---------------KF 377
I +N++ + I GP T Y GG F+ ++ P+ YP PP++ KF
Sbjct: 45 IKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKF 104
Query: 378 VTEIWHPNI-DKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPND 554
VT IWHPNI + G +C+ IL ++W T+ T+L+S+ +ML P
Sbjct: 105 VTRIWHPNISSQTGTICLDIL-------------KDKWTASLTLRTVLLSLQAMLCSPEP 151
Query: 555 ESPANVDAAKEWRERYSEF 611
P + AK++ Y F
Sbjct: 152 SDPQDAVVAKQFINNYPMF 170
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 66.1 bits (154), Expect = 3e-11
Identities = 40/121 (33%), Positives = 59/121 (48%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
LKK L K PV A ++ N I +W +IIG P T YEGG + L FPK++P +P
Sbjct: 13 LKKDYQRLLKEPVPFMKAAPLETN-ILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKP 71
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P + +T + N +C+SI + + W P TV TI+ ++S +
Sbjct: 72 PAILMLTP--NGRFQTNTRLCLSI----------SDYHPDTWNPAWTVSTIITGLMSFMN 119
Query: 543 D 545
D
Sbjct: 120 D 120
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 61.7 bits (143), Expect = 7e-10
Identities = 38/149 (25%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLI--DDNDIY-KWEVLIIGPPDTLYEGGFFKAHLNFPKEYP 353
+K++ A+ ++ +G++A I + DI+ W + GP + +EGG ++ +NF K +P
Sbjct: 40 VKEEKAKWDERTPQGYTAKPISFEGADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK-WP 98
Query: 354 LRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVIS 533
+ PP +F T + HPN+D G + + +L + E W +++ +L + +
Sbjct: 99 IIPPICEFKTPLHHPNVDLRGSIYLKMLEQ------------EHWSSETSLKKLLREISN 146
Query: 534 MLADPNDESPANVDAAKEWRERYSEFKKK 620
+LA P+ AN++A E+ + ++ K
Sbjct: 147 LLATPDLTQAANIEAWMEYENQRENYEAK 175
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 61.3 bits (142), Expect = 1e-09
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Frame = +3
Query: 285 GPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKW 461
GP DT YE G ++ ++ P +YP + P + F+ +I+HPNID+ +G VC+ ++++ +
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALY 100
Query: 462 GYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKK 617
+ +LP +L PN P N +AA+ + + E+++
Sbjct: 101 DLTNIFDTFLP------------QLLTYPNAADPLNGEAARLYIHKPEEYRR 140
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 60.9 bits (141), Expect = 1e-09
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Frame = +3
Query: 276 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGD 452
+I G +T YEGG F+ + + YP + P +KF+T+IWHP++ +G +C LH+ +
Sbjct: 384 IIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTIC---LHDVDN 440
Query: 453 DKWGYEKASERWLPVH-TVETILISVISMLADPNDESPANVDAAKEWRERYSEFKK 617
W PV T+ +LI + S +++ N++ P +V+ ++ F+K
Sbjct: 441 GVW----------PVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEK 486
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 58.0 bits (134), Expect = 9e-09
Identities = 39/128 (30%), Positives = 65/128 (50%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L+K A+L ++PV+G A L ++++I +W + G PDT + GG++ + F + +P P
Sbjct: 24 LQKDYAKLMQDPVDGIKA-LPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWSP 82
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P + +T + N +C+SI + E W P TV ILI + S +
Sbjct: 83 PAITMITP--NGRFQTNTRLCLSI----------SDYHPESWNPGWTVSAILIGLHSFM- 129
Query: 543 DPNDESPA 566
N+ SPA
Sbjct: 130 --NENSPA 135
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 56.4 bits (130), Expect = 3e-08
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Frame = +3
Query: 183 LKKQLAEL-NKNPVEGFSAGLI--DDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYP 353
+ K+LA + N P+ ++ + D+ + +VLI GP DT Y G F+ + FP YP
Sbjct: 414 IAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYP 473
Query: 354 LRPPRMKFVTE-----IWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETIL 518
PP+ F+T ++PN+ +G +C+SIL W + E+W P ++ +L
Sbjct: 474 FSPPKCAFLTTGSGNVRFNPNLYNDGKICLSIL-----GTW-EGRPEEKWNPYCSLMQVL 527
Query: 519 ISV 527
+S+
Sbjct: 528 VSI 530
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = +3
Query: 153 LMSEPQSSLLLKKQLAELNKNPVEG-FSAGLIDDND--IYKWEVLIIGPPDTLYEGGFFK 323
++ P++ LL+ +L E K +G S GL DD+D + +W IIGPP T YE +
Sbjct: 1 MVDVPRNFRLLE-ELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYN 59
Query: 324 AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDV 422
+ YP PP ++F T++ ++++ V
Sbjct: 60 LQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGV 92
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 320
++K+L +L ++P S G + D D+Y W+ I+GPP++ Y+GG F
Sbjct: 6 IQKELHDLGRDPPAQCSTGSVGD-DLYHWQATIMGPPESPYQGGIF 50
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +3
Query: 279 IIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWH 395
I GP DT YE G F+ L FP YP P++KF T IW+
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWN 73
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 44.0 bits (99), Expect = 2e-04
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 243 IDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNF-PKEYPLRPPRMKFVTEIWHPNIDKNGD 419
ID+ + V+I GP ++YEGG F A +N P + PR+ F T I+HPN+ K G+
Sbjct: 56 IDETKQLLFHVIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKYGN 115
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 35.1 bits (77), Expect = 0.074
Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L + E+ + P++G +N + V+ + ++ GG F+ +++ P E+P
Sbjct: 24 LAAEFVEVCRAPIDGIFVSPSANNKFLWFGVIFVRKG--IFGGGIFRFNIHIPLEFPDAS 81
Query: 363 --PRMKF-VTEIWHPNI-DKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
PR+ F + ++HP I K+ ++C++ G W EK S R + V ++ S
Sbjct: 82 DLPRVIFEQSNLFHPLICTKSKELCLNRSFPEG---WKKEKHSLRRVLV-VLQRSFYSY- 136
Query: 531 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQ 647
D + + N +A+ ++E +F++ CV S+
Sbjct: 137 ----DVDTDKCINPEASVLYKEHRDKFREIAKECVEASR 171
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -3
Query: 256 SLSSIKPAEKPSTGFLFSSANCFFNKSEDCGSDINYNCEIXP*RHETN 113
SL + ++P+ GFL + AN NK+++ GS I I P +N
Sbjct: 1100 SLPGSRMLKRPNFGFLSNIANDAINKAKEAGSQIQAAVPIKPSSSSSN 1147
>AF016678-9|AAB66155.1| 155|Caenorhabditis elegans Hypothetical
protein K07E8.10 protein.
Length = 155
Score = 30.3 bits (65), Expect = 2.1
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -3
Query: 403 IFGCHISVTNFIRGGLKGYSLGKFKCALKKPPSYSVSGGPIMRTSHLYISLSSIKPAEKP 224
+F HI VT F +G K C + PP +S PIM Y S I + P
Sbjct: 81 LFKNHIKVT-FDHA--RGLYRTKHDC--QNPPKIVLSKRPIMDCQQFYQSSEDIDEEQVP 135
Query: 223 STGFLFSSANC-FFNKS 176
ST + SS+N F+KS
Sbjct: 136 STSNVQSSSNAPSFSKS 152
>Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical
protein F14B6.2 protein.
Length = 720
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 310 PSYSVSGGPIMRTSHLYISLSSIKPAEKPSTGFLFSSANC-FFNKSEDCGSDINYNCEIX 134
PS+S GP H++ +S P+ P+ F+ S+ ++ + D ++ Y +
Sbjct: 499 PSHSSHSGPAQAPQHIHFESASSTPSTPPAFHFIPPSSEAPYYVEINDADTETVYVSSVT 558
Query: 133 P 131
P
Sbjct: 559 P 559
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
protein F54F3.1 protein.
Length = 1584
Score = 28.7 bits (61), Expect = 6.4
Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 8/99 (8%)
Frame = -3
Query: 361 GLKGYSLGKFKCALKKPPSYSVSGGPIMRTSHLYISLSSIKPAEKPSTGFLFSSANCFFN 182
G+ Y F P + SGG R H +++S +P E PS S+ +
Sbjct: 606 GVVRYGAKNFATRSVGPAVSAPSGGHFDRRQHGQSNMASERPIEIPSQSESISTDSVCAP 665
Query: 181 KSEDCGS--------DINYNCEIXP*RHETNDFSTKDGW 89
C D +Y CE P +D S+ GW
Sbjct: 666 GRHQCTLPNMKCRVVDPSYRCECEPGYQAAHDASSHIGW 704
>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
protein R09A1.1 protein.
Length = 1121
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 246 DDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHP 398
D++ I +WE + PP + +G F+ L E PL M + I P
Sbjct: 622 DEHHIGEWEAVTHDPPRQVLDGAVFRRKLYKSSEQPLMKRLMGSILLIQSP 672
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,036,241
Number of Sequences: 27780
Number of extensions: 409822
Number of successful extensions: 1065
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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