Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E05
(948 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 252 3e-67
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 251 4e-67
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 213 1e-55
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 116 2e-26
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 115 5e-26
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 114 7e-26
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 114 7e-26
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 111 5e-25
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 109 3e-24
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 107 1e-23
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 107 1e-23
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 107 1e-23
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 105 3e-23
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 105 3e-23
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 105 3e-23
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 105 3e-23
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 105 4e-23
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 105 4e-23
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 105 4e-23
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 103 1e-22
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 102 3e-22
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 99 2e-21
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 96 3e-20
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 96 3e-20
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 95 5e-20
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 93 2e-19
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 91 7e-19
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 90 2e-18
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 89 3e-18
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 86 4e-17
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 81 1e-15
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 80 2e-15
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 80 2e-15
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 78 1e-14
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 76 3e-14
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 75 9e-14
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 75 9e-14
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 73 4e-13
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 72 6e-13
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 69 6e-12
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 67 2e-11
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 66 2e-11
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 66 3e-11
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 62 7e-10
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 54 1e-07
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 52 4e-07
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 52 4e-07
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 46 4e-05
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 46 5e-05
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 46 5e-05
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 44 1e-04
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 42 8e-04
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 42 8e-04
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 41 0.001
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 40 0.002
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 40 0.003
At1g44000.1 68414.m05076 expressed protein 34 0.12
At4g10560.1 68417.m01729 DC1 domain-containing protein contains ... 32 0.64
At3g61630.1 68416.m06907 AP2 domain-containing transcription fac... 31 0.85
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 31 1.5
At1g48490.1 68414.m05420 protein kinase, putative similar to inc... 30 2.0
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 30 2.6
At3g23790.1 68416.m02990 AMP-binding protein, putative similar t... 29 3.4
At2g33170.1 68415.m04064 leucine-rich repeat transmembrane prote... 29 4.5
At1g50750.1 68414.m05707 expressed protein 29 4.5
At2g02680.1 68415.m00207 DC1 domain-containing protein contains ... 28 7.9
At1g33340.1 68414.m04125 epsin N-terminal homology (ENTH) domain... 28 7.9
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 252 bits (617), Expect = 3e-67
Identities = 110/161 (68%), Positives = 137/161 (85%)
Frame = +3
Query: 168 QSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKE 347
Q+ LLL+KQL +L K+PV+GFSAGL+D+ +I++W V IIGPPDTLYEGGFF A ++FP+
Sbjct: 4 QACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQN 63
Query: 348 YPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISV 527
YP PP ++F ++IWHPN+ +G VCISILH PGDD GYE ASERW PVHTVE+I++S+
Sbjct: 64 YPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSI 123
Query: 528 ISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQE 650
ISML+ PNDESPANV+AAKEWRE+ EFKKKV+RCVRKSQE
Sbjct: 124 ISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRKSQE 164
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 251 bits (615), Expect = 4e-67
Identities = 107/165 (64%), Positives = 139/165 (84%)
Frame = +3
Query: 156 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLN 335
M+ Q+SLLL+KQL +L K PV+GFSAGL+D+ ++++W V I+GPPDTLYEGGFF A ++
Sbjct: 1 MANNQASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMS 60
Query: 336 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 515
FP+ YP+ PP + F +E+WHPN+ +G VCISILH PGDD GYE ASERW PVHTVE+I
Sbjct: 61 FPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESI 120
Query: 516 LISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQE 650
++S+ISML+ PNDESPANV+AAKEWR+ +EF+KKV+RCVR+SQE
Sbjct: 121 VLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRRSQE 165
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 213 bits (520), Expect = 1e-55
Identities = 91/135 (67%), Positives = 112/135 (82%)
Frame = +3
Query: 246 DDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVC 425
D +I++W V IIGPPDTLYEGGFF A + FP+ YP PP ++F +++WHPN+ +G VC
Sbjct: 62 DCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVC 121
Query: 426 ISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYS 605
ISILH PGDD GYE ASERW PVHTVE+I++S+ISML+ PNDESPANV+AAKEWR++
Sbjct: 122 ISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRD 181
Query: 606 EFKKKVARCVRKSQE 650
EFKKKV+RCVRKSQE
Sbjct: 182 EFKKKVSRCVRKSQE 196
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 116 bits (280), Expect = 2e-26
Identities = 58/147 (39%), Positives = 87/147 (59%)
Frame = +3
Query: 204 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVT 383
L K+P G S G DN+I W LI GP DT ++GG FK L+F ++YP +PP ++FV+
Sbjct: 16 LQKDPPVGIS-GAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVS 74
Query: 384 EIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESP 563
++HPNI +G +C+ IL +W P++ V +L S+ S+L DPN +SP
Sbjct: 75 RMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAVLTSIQSLLCDPNPDSP 121
Query: 564 ANVDAAKEWRERYSEFKKKVARCVRKS 644
AN +AA+ + E E+ +KV V +S
Sbjct: 122 ANAEAARLFSENKREYNRKVIEIVEQS 148
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 115 bits (276), Expect = 5e-26
Identities = 60/163 (36%), Positives = 91/163 (55%)
Frame = +3
Query: 156 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLN 335
MS P L++ L ++P G S G DN+I W +I GP DT ++GG FK L
Sbjct: 1 MSTPARKRLMR-DFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQ 58
Query: 336 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 515
F ++YP +PP ++FV+ ++HPNI +G +C+ IL +W P++ V I
Sbjct: 59 FSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAI 105
Query: 516 LISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 644
L S+ S+L DPN SPAN +AA+ + E E+ ++V V +S
Sbjct: 106 LTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQS 148
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 114 bits (275), Expect = 7e-26
Identities = 60/163 (36%), Positives = 91/163 (55%)
Frame = +3
Query: 156 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLN 335
MS P L++ L ++P G S G DN+I W +I GP DT ++GG FK L
Sbjct: 1 MSTPARKRLMR-DFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQ 58
Query: 336 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 515
F ++YP +PP ++FV+ ++HPNI +G +C+ IL +W P++ V I
Sbjct: 59 FSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAI 105
Query: 516 LISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 644
L S+ S+L DPN SPAN +AA+ + E E+ ++V V +S
Sbjct: 106 LTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQS 148
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 114 bits (275), Expect = 7e-26
Identities = 60/163 (36%), Positives = 91/163 (55%)
Frame = +3
Query: 156 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLN 335
MS P L++ L ++P G S G DN+I W +I GP DT ++GG FK L
Sbjct: 1 MSTPARKRLMR-DFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQ 58
Query: 336 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 515
F ++YP +PP ++FV+ ++HPNI +G +C+ IL +W P++ V I
Sbjct: 59 FSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAI 105
Query: 516 LISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 644
L S+ S+L DPN SPAN +AA+ + E E+ ++V V +S
Sbjct: 106 LTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQS 148
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 111 bits (268), Expect = 5e-25
Identities = 51/157 (32%), Positives = 90/157 (57%)
Frame = +3
Query: 171 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
+S + K+L +L K+P SAG + + D++ W+ I+GPP++ Y GG F ++FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAE-DMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
P +PP++ F T+++HPNI+ NG +C+ IL E+W P T+ +L+S+
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 531 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRK 641
S+L DPN + P + A ++ S+++ +K
Sbjct: 108 SLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQK 144
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 109 bits (261), Expect = 3e-24
Identities = 48/157 (30%), Positives = 86/157 (54%)
Frame = +3
Query: 171 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
+S + ++L ++ ++P SAG + + DI+ W+ I+GP D+ Y GG F ++F +Y
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
P +PP++ F T+++HPNID G +C+ IL E+W P T +L+S+
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDIL-------------KEQWSPAPTTSKVLLSIC 108
Query: 531 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRK 641
S+L DPN P + A ++ S+++ + +K
Sbjct: 109 SLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQK 145
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 107 bits (257), Expect = 1e-23
Identities = 50/157 (31%), Positives = 89/157 (56%)
Frame = +3
Query: 171 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
+S + K+L +L K+P SAG + + D++ W+ I+GP D+ Y GG F ++FP +Y
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
P +PP++ F T+++HPNI+ NG +C+ IL E+W P T+ +L+S+
Sbjct: 91 PFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSIC 137
Query: 531 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRK 641
S+L DPN + P + A ++ ++++ +K
Sbjct: 138 SLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQK 174
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 107 bits (257), Expect = 1e-23
Identities = 50/157 (31%), Positives = 89/157 (56%)
Frame = +3
Query: 171 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
+S + K+L +L K+P SAG + + D++ W+ I+GP D+ Y GG F ++FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
P +PP++ F T+++HPNI+ NG +C+ IL E+W P T+ +L+S+
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 531 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRK 641
S+L DPN + P + A ++ ++++ +K
Sbjct: 108 SLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQK 144
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 107 bits (256), Expect = 1e-23
Identities = 49/157 (31%), Positives = 89/157 (56%)
Frame = +3
Query: 171 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
+S + K+L +L K+P SAG + + D++ W+ I+GP D+ Y GG F ++FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
P +PP++ F T+++HPN++ NG +C+ IL E+W P T+ +L+S+
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 531 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRK 641
S+L DPN + P + A ++ ++++ +K
Sbjct: 108 SLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQK 144
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 105 bits (253), Expect = 3e-23
Identities = 48/131 (36%), Positives = 79/131 (60%)
Frame = +3
Query: 171 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
+S + K+L +L ++P SAG D D+++W+ I+GP D+ + GG F ++FP +Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
P +PP++ F T+++HPNI+ NG +C+ IL E+W P TV +L+S+
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDIL-------------KEQWSPALTVSKVLLSIC 107
Query: 531 SMLADPNDESP 563
S+L DPN + P
Sbjct: 108 SLLTDPNPDDP 118
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 105 bits (253), Expect = 3e-23
Identities = 48/131 (36%), Positives = 79/131 (60%)
Frame = +3
Query: 171 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
+S + K+L +L ++P SAG D D+++W+ I+GP D+ + GG F ++FP +Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
P +PP++ F T+++HPNI+ NG +C+ IL E+W P TV +L+S+
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDIL-------------KEQWSPALTVSKVLLSIC 107
Query: 531 SMLADPNDESP 563
S+L DPN + P
Sbjct: 108 SLLTDPNPDDP 118
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 105 bits (253), Expect = 3e-23
Identities = 49/157 (31%), Positives = 89/157 (56%)
Frame = +3
Query: 171 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
+S + K+L +L K+P SAG + + D++ W+ I+GP ++ Y GG F ++FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
P +PP++ F T+++HPNI+ NG +C+ IL E+W P T+ +L+S+
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 531 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRK 641
S+L DPN + P + A ++ ++++ +K
Sbjct: 108 SLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQK 144
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 105 bits (253), Expect = 3e-23
Identities = 49/157 (31%), Positives = 89/157 (56%)
Frame = +3
Query: 171 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
+S + K+L +L K+P SAG + + D++ W+ I+GP ++ Y GG F ++FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
P +PP++ F T+++HPNI+ NG +C+ IL E+W P T+ +L+S+
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 531 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRK 641
S+L DPN + P + A ++ ++++ +K
Sbjct: 108 SLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQK 144
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 105 bits (252), Expect = 4e-23
Identities = 49/157 (31%), Positives = 89/157 (56%)
Frame = +3
Query: 171 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
+S + K+L +L K+P SAG + + D++ W+ I+GP ++ Y GG F ++FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
P +PP++ F T+++HPNI+ NG +C+ IL E+W P T+ +L+S+
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 531 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRK 641
S+L DPN + P + A ++ ++++ +K
Sbjct: 108 SLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQK 144
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 105 bits (252), Expect = 4e-23
Identities = 49/157 (31%), Positives = 89/157 (56%)
Frame = +3
Query: 171 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
+S + K+L +L K+P SAG + + D++ W+ I+GP ++ Y GG F ++FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
P +PP++ F T+++HPNI+ NG +C+ IL E+W P T+ +L+S+
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 531 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRK 641
S+L DPN + P + A ++ ++++ +K
Sbjct: 108 SLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQK 144
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 105 bits (252), Expect = 4e-23
Identities = 51/140 (36%), Positives = 81/140 (57%)
Frame = +3
Query: 189 KQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPR 368
K+ L P G SA +DN Y + V+I+GP + YEGG FK L P+EYP+ P+
Sbjct: 12 KETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPK 70
Query: 369 MKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADP 548
++F+T+I+HPNIDK G +C+ IL ++W P + T+L+S+ ++L+ P
Sbjct: 71 VRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAP 117
Query: 549 NDESPANVDAAKEWRERYSE 608
N + P + + AK W+ +E
Sbjct: 118 NPDDPLSENIAKHWKSNEAE 137
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 103 bits (248), Expect = 1e-22
Identities = 50/140 (35%), Positives = 81/140 (57%)
Frame = +3
Query: 189 KQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPR 368
K+ L P G SA ++N Y + V+I+GP + YEGG FK L P+EYP+ P+
Sbjct: 12 KETQRLLSEPAPGISASPSEENMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPK 70
Query: 369 MKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADP 548
++F+T+I+HPNIDK G +C+ IL ++W P + T+L+S+ ++L+ P
Sbjct: 71 VRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAP 117
Query: 549 NDESPANVDAAKEWRERYSE 608
N + P + + AK W+ +E
Sbjct: 118 NPDDPLSENIAKHWKSNEAE 137
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 102 bits (245), Expect = 3e-22
Identities = 45/125 (36%), Positives = 77/125 (61%)
Frame = +3
Query: 189 KQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPR 368
K+L EL ++P SAG + D++ W+ I+GP ++ Y GG F +++FP +YP +PP+
Sbjct: 8 KELKELQRDPPVSCSAGPTGE-DMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPK 66
Query: 369 MKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADP 548
+ F T+++HPNI+ NG++C+ IL ++W P T+ +L+S+ S+L DP
Sbjct: 67 VVFRTKVFHPNINSNGNICLDIL-------------KDQWSPALTISKVLLSICSLLTDP 113
Query: 549 NDESP 563
N + P
Sbjct: 114 NPDDP 118
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 99 bits (238), Expect = 2e-21
Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 1/158 (0%)
Frame = +3
Query: 171 SSLLLKKQLAELNKNPVEG-FSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKE 347
+S + K+L +L K+P AG + + D++ W+ I+GP ++ Y GG F ++FP +
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60
Query: 348 YPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISV 527
YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+ +L+S+
Sbjct: 61 YPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSI 107
Query: 528 ISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRK 641
S+L DPN + P + A ++ ++++ +K
Sbjct: 108 CSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQK 145
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 96.3 bits (229), Expect = 3e-20
Identities = 48/134 (35%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLI-DDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLR 359
L K+ E+ + V LI DD +I+KW LI GP +T YEGG F+ + P+ YPL+
Sbjct: 8 LFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQ 67
Query: 360 PPRMKFVTEIWHPNID-KNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISM 536
PP+++F+T+I+HPN+ K G++C+ IL W P T++++ ++I++
Sbjct: 68 PPQVRFLTKIFHPNVHFKTGEICLDIL-------------KNAWSPAWTLQSVCRAIIAL 114
Query: 537 LADPNDESPANVDA 578
+A P +SP N D+
Sbjct: 115 MAHPEPDSPLNCDS 128
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 95.9 bits (228), Expect = 3e-20
Identities = 52/149 (34%), Positives = 83/149 (55%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L+ +L L G SA +DN I+ W+ I G DT++EG ++ L+F +YP +P
Sbjct: 40 LQSELMGLMMGGGPGISAFPEEDN-IFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKP 98
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P++KF T +HPN+D G++C+ IL ++W + V TIL+S+ S+L
Sbjct: 99 PKVKFETCCFHPNVDVYGNICLDIL-------------QDKWSSAYDVRTILLSIQSLLG 145
Query: 543 DPNDESPANVDAAKEWRERYSEFKKKVAR 629
+PN SP N AA+ W + E++K V +
Sbjct: 146 EPNISSPLNTQAAQLWSNQ-EEYRKMVEK 173
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 95.5 bits (227), Expect = 5e-20
Identities = 42/114 (36%), Positives = 70/114 (61%)
Frame = +3
Query: 267 WEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEP 446
+ V+I+GP + YEGG FK L P+EYP+ P+++F+T+I+HPNIDK G +C+ IL
Sbjct: 4 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL--- 60
Query: 447 GDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSE 608
++W P + T+L+S+ ++L+ PN + P + + AK W+ +E
Sbjct: 61 ----------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAE 104
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 93.5 bits (222), Expect = 2e-19
Identities = 44/131 (33%), Positives = 72/131 (54%)
Frame = +3
Query: 228 FSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNID 407
FS G + N+IY+W +I GP T YEGG F + FP +YP +PP+ F T I+HPNI+
Sbjct: 27 FSIGQ-NSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNIN 85
Query: 408 KNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKE 587
G +C++IL ++W P VE +L+S++ +L PN + P + +
Sbjct: 86 DEGSICMNIL-------------KDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQL 132
Query: 588 WRERYSEFKKK 620
++ +F ++
Sbjct: 133 FKNNRFQFDQR 143
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 91.5 bits (217), Expect = 7e-19
Identities = 51/149 (34%), Positives = 81/149 (54%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L+ +L L G SA +DN I+ W+ I G DT++EG ++ L F +YP +
Sbjct: 41 LQSELMGLMMGADPGISAFPEEDN-IFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKS 99
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P++KF T +HPN+D G++C+ IL ++W + V TIL+S+ S+L
Sbjct: 100 PKVKFETCCFHPNVDLYGNICLDIL-------------QDKWSSAYDVRTILLSIQSLLG 146
Query: 543 DPNDESPANVDAAKEWRERYSEFKKKVAR 629
+PN SP N AA+ W + E++K V +
Sbjct: 147 EPNISSPLNNQAAQLWSNQ-EEYRKMVEK 174
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 90.2 bits (214), Expect = 2e-18
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
+++++AELN +P SAG DN +Y W IIGP T YEGG F + FP +YP +P
Sbjct: 41 IQREMAELNIDPPPDCSAGPKGDN-LYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKP 99
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P++ F T I+H N+D GD+ ++IL + W P T+ +L ++ S+
Sbjct: 100 PKLVFKTRIYHCNVDTAGDLSVNILR-------------DSWSPALTITKVLQAIRSIFL 146
Query: 543 DPNDESPANVDAAKEW---RERYSEFKKK 620
P SPA A+ + RE++ E K+
Sbjct: 147 KPEPYSPALPVIARLYLTDREKHDEVAKE 175
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 89.4 bits (212), Expect = 3e-18
Identities = 36/91 (39%), Positives = 61/91 (67%)
Frame = +3
Query: 171 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
+S + K+L +L K+P SAG + + D++ W+ I+GP ++ Y GG F ++FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHE 443
P +PP++ F T+++HPNI+ NG +C+ IL E
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKE 91
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 85.8 bits (203), Expect = 4e-17
Identities = 41/91 (45%), Positives = 57/91 (62%)
Frame = +3
Query: 189 KQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPR 368
K+ L P G SA +DN Y + V+I+GP + YEGG FK L P+EYP+ P+
Sbjct: 12 KETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPK 70
Query: 369 MKFVTEIWHPNIDKNGDVCISILHEPGDDKW 461
++F+T+I+HPNIDK G +C+ IL DKW
Sbjct: 71 VRFLTKIYHPNIDKLGRICLDIL----KDKW 97
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 80.6 bits (190), Expect = 1e-15
Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSA----GLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
L ++ KN GF A G ++ W I G T +EGGFF ++F ++Y
Sbjct: 10 LAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDY 69
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
P +PP+ KF +HPN+ +G VC+SIL+E +G W P TV+ IL+ +
Sbjct: 70 PSKPPKCKFPQGFFHPNVYPSGTVCLSILNE----DYG-------WRPAITVKQILVGIQ 118
Query: 531 SMLADPNDESPANVDAAKEWRERYSEFKKKV 623
+L PN PA D + + E+KK+V
Sbjct: 119 DLLDTPNPADPAQTDGYHLFCQDPVEYKKRV 149
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 80.2 bits (189), Expect = 2e-15
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Frame = +3
Query: 174 SLLLKKQLAELNKNPVEGFSA--------GLIDDNDIYKWEVLIIGPPDTLYEGGFFKAH 329
SL ++K+L L +P G S G D + + I GP DT+Y G F
Sbjct: 8 SLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLK 67
Query: 330 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 509
+ P+ YP +PP + F T I+HPNID +G +C+ IL+ P W P +
Sbjct: 68 IQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLP---------PKGAWQPSLNIS 118
Query: 510 TILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRK 641
T+L S+ +L++PN + + ++E++ F K K
Sbjct: 119 TVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEK 162
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 79.8 bits (188), Expect = 2e-15
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
++K+L + +N +++ + I GP T YEGG F+ + P YP P
Sbjct: 7 IQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEP 66
Query: 363 PRMKFVTEIWHPNI-DKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISML 539
P+M+F T++WHPNI ++G +C+ IL ++W P T++T L+S+ ++L
Sbjct: 67 PKMQFSTKVWHPNISSQSGAICLDIL-------------KDQWSPALTLKTALVSIQALL 113
Query: 540 ADPNDESPANVDAAKEWRERYSEF 611
+ P + P + A+++ + Y F
Sbjct: 114 SAPEPKDPQDAVVAEQYMKNYQVF 137
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 77.8 bits (183), Expect = 1e-14
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L+K+L+E NP GF + D+ + KW + + G P TLY ++ + FP+ YP+
Sbjct: 20 LQKELSEWQLNPPTGFRHKVTDN--LQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEA 77
Query: 363 PRMKFVTEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISML 539
P++ FV+ HP+I NG +C+ IL+ + W P TV ++ IS++SML
Sbjct: 78 PQVVFVSPAPSHPHIYSNGHICLDILY-------------DSWSPAMTVNSVCISILSML 124
Query: 540 -ADPNDESPANVD 575
+ P + PA+ D
Sbjct: 125 SSSPAKQRPADND 137
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 76.2 bits (179), Expect = 3e-14
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L+K+L+E NP GF + D+ + KW + + G P TLY + + FP+ YP+
Sbjct: 20 LQKELSEWQVNPPTGFKHRVTDN--LQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEA 77
Query: 363 PRMKFVTEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISML 539
P++ FV HP+I NG +C+ IL+ + W P TV ++ IS++SML
Sbjct: 78 PQVIFVPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSML 124
Query: 540 -ADPNDESPANVD 575
+ P + P + D
Sbjct: 125 SSSPEKQRPTDND 137
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 74.5 bits (175), Expect = 9e-14
Identities = 44/145 (30%), Positives = 72/145 (49%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L K+L L+++P +G +++D D + I GP T YE G F+ L ++P P
Sbjct: 15 LAKELKSLDESPPDGIKV-VVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSP 73
Query: 363 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
P+ F+T+I+HPN+ NG++C++ L + W P + +L V +L
Sbjct: 74 PKGYFMTKIFHPNVASNGEICVNTL-------------KKDWNPSLGLRHVLSVVRCLLI 120
Query: 543 DPNDESPANVDAAKEWRERYSEFKK 617
+P ES N A K E Y E+ +
Sbjct: 121 EPFPESALNEQAGKMLLENYDEYAR 145
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 74.5 bits (175), Expect = 9e-14
Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L+K+L E NP GF + D+ + +W + +IG P TLY ++ ++FP+ YP+
Sbjct: 20 LQKELVEWQMNPPTGFKHKVTDN--LQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMES 77
Query: 363 PRMKFVTEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISML 539
P++ F+ HP+I NG +C+ IL+ + W P TV +I IS++SML
Sbjct: 78 PQVIFLHPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSICISILSML 124
Query: 540 ADPNDE 557
+ ++
Sbjct: 125 SSSTEK 130
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 72.5 bits (170), Expect = 4e-13
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Frame = +3
Query: 177 LLLKKQLAELN--KNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEY 350
L L K ++ELN K+ F G ND+ +EV I P + Y G F Y
Sbjct: 34 LRLHKDISELNLPKSCKISFPNG---KNDLMNFEVTI-KPDEGYYLSGNFVFSFQVSNMY 89
Query: 351 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 530
P P++K T+++HPNID G+VC++IL E W PV + T++ +
Sbjct: 90 PHEAPKVKCKTKVYHPNIDLEGNVCLNILRED-------------WKPVLNINTVIYGLF 136
Query: 531 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQ 647
+ +PN E P N +AA R+ F+ V R + Q
Sbjct: 137 HLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQ 175
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 71.7 bits (168), Expect = 6e-13
Identities = 38/125 (30%), Positives = 68/125 (54%)
Frame = +3
Query: 255 DIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISI 434
+I++WE + GP YE G F ++ P +YP PP++ F T+I+HPNI + G++ + I
Sbjct: 58 NIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDI 117
Query: 435 LHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFK 614
L RW T+ +L+S+ S+L++P + + AA+ +++ +
Sbjct: 118 L-------------GSRWSSALTINLVLLSICSILSNPVEPLLVSNHAARLYQKDRKAY- 163
Query: 615 KKVAR 629
+KVAR
Sbjct: 164 EKVAR 168
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 68.5 bits (160), Expect = 6e-12
Identities = 31/104 (29%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +3
Query: 186 KKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPP 365
K++ +L K + + +I+D + ++ V GP D++YEGG +K + P YP + P
Sbjct: 6 KRREMDLMKLMMSDYKVEMINDG-MQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSP 64
Query: 366 RMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLP 494
+ F+T+I+HPN+D+ +G VC+ ++++ + E +LP
Sbjct: 65 SVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLP 108
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 66.9 bits (156), Expect = 2e-11
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Frame = +3
Query: 186 KKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPP 365
K++ ++ K + + ++D D+ + V GP D+LY+GG +K + P+ YP + P
Sbjct: 6 KRREMDMMKLMMSDYKVDTVND-DLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSP 64
Query: 366 RMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 542
+ FV +I+HPN+D+ +G VC+ ++++ + E +LP +L
Sbjct: 65 SVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLP------------QLLL 112
Query: 543 DPNDESPANVDAAKEWRERYSEFKKKVARCVRK 641
PN P N +AA + ++ KV K
Sbjct: 113 YPNPSDPFNGEAASLLMRDRAAYELKVKEYCEK 145
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/135 (27%), Positives = 70/135 (51%)
Frame = +3
Query: 189 KQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPR 368
+++ E+ NP + F + +++N I++W+ I GP DT +EGG + + P +YP +PP
Sbjct: 18 QEVKEMQANPSDDFMSLPLEEN-IFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPS 76
Query: 369 MKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADP 548
+T + + N +C+SI + Y E W P +V T L+++I+ +
Sbjct: 77 FMLLTP--NGRFETNTKICLSISN--------YH--PEHWQPSWSVRTALVALIAFMPTS 124
Query: 549 NDESPANVDAAKEWR 593
+ + +VD K+ R
Sbjct: 125 PNGALGSVDYPKDER 139
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +3
Query: 186 KKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPP 365
K++ ++ K + + I+D + ++ V GP D+LY+GG +K + P YP + P
Sbjct: 6 KRREMDMMKLMMSDYKVETINDG-MQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSP 64
Query: 366 RMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLP 494
+ F+T+I+HPN+D+ +G VC+ ++++ + E +LP
Sbjct: 65 SVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLP 108
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 61.7 bits (143), Expect = 7e-10
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Frame = +3
Query: 183 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 362
L+K+ E NP GF + D+ + +W + + G P TLY ++ + FP+ YP+
Sbjct: 20 LQKEFMEWQTNPPSGFKHRVSDN--LQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEA 77
Query: 363 PRMKFVTEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISML 539
P++ F HP+I NG +C+ +L+ + W P + +I +S++SML
Sbjct: 78 PQVIFQHPAPLHPHIYSNGHICLDVLY-------------DSWSPAMRLSSICLSILSML 124
Query: 540 A 542
+
Sbjct: 125 S 125
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/151 (25%), Positives = 69/151 (45%)
Frame = +3
Query: 156 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLN 335
M+E L+K+ L K PV A NDI +W ++ G T + GGF+ +
Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHVVARP-SPNDILEWHYVLEGSEGTPFAGGFYYGKIK 59
Query: 336 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 515
FP EYP +PP + T + +C+S+ + E W P+ +V +I
Sbjct: 60 FPPEYPYKPPGITMTTP--NGRFVTQKKICLSM----------SDFHPESWNPMWSVSSI 107
Query: 516 LISVISMLADPNDESPANVDAAKEWRERYSE 608
L ++S + D N + +V+ + ++R ++
Sbjct: 108 LTGLLSFMMD-NSPTTGSVNTSVAEKQRLAK 137
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 231 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEI 389
S G+ D +DIY W I+GPP+T YEG F+ L KEYP PP ++F T I
Sbjct: 33 SYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRI 87
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 52.4 bits (120), Expect = 4e-07
Identities = 37/130 (28%), Positives = 58/130 (44%)
Frame = +3
Query: 156 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLN 335
M+E L+K+ L K PV A NDI +W ++ G T + GGF+ +
Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHVVARP-SPNDILEWHYVLEGSEGTPFAGGFYYGKIK 59
Query: 336 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 515
FP EYP +PP + T K +C+S+ + E W P+ +V +I
Sbjct: 60 FPPEYPYKPPGITMTTPNGRFMTQKK--ICLSM----------SDFHPESWNPMWSVSSI 107
Query: 516 LISVISMLAD 545
L ++S + D
Sbjct: 108 LTGLLSFMMD 117
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +3
Query: 231 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEI 389
S G+ D +DIY W IIGP +T++EG ++ L K+YP +PP ++F + I
Sbjct: 34 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 88
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 45.6 bits (103), Expect = 5e-05
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +3
Query: 231 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEI 389
S G+ D +DIY W IIGP +T++EG ++ L K+YP +PP ++F + +
Sbjct: 35 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 89
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 45.6 bits (103), Expect = 5e-05
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +3
Query: 276 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTE--IWHPNIDKNGDVCISILHEPG 449
+IIG T Y G F + FP YP PP++ + + +PN+ K G VC+S++
Sbjct: 640 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLI---- 695
Query: 450 DDKWGYEKASERWLPVH-TVETILISVISML 539
W +K E+WLP T+ +L+S+ +++
Sbjct: 696 -STWTGKK-REKWLPKESTMLQLLVSIQALI 724
Score = 44.4 bits (100), Expect = 1e-04
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Frame = +3
Query: 276 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTE--IWHPNIDKNGDVCISILHEPG 449
+IIG T Y G F + FP YP PP + + + +PN+ G VC+S+L
Sbjct: 306 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLL---- 361
Query: 450 DDKWGYEKASERWLP-VHTVETILISVISMLAD--PNDESPANVDAA 581
W A E+WLP T+ +L+S+ +++ + P P V +A
Sbjct: 362 -GTWA-GSAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQSA 406
Score = 32.7 bits (71), Expect = 0.37
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +3
Query: 276 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTE--IWHPNIDKNGDVCISI----L 437
+IIG T Y G F + FP YP PP + + + +PN+ G V +SI L
Sbjct: 952 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSIQALVL 1011
Query: 438 HE-PGDDKWGYEKASERWL 491
+E P ++ GY WL
Sbjct: 1012 NEQPYFNEPGYGLIKGTWL 1030
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +3
Query: 231 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNI 404
S G+ D +DI W I+GP +T YEG F+ L K+YP PP ++F + I +
Sbjct: 33 SYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACV 92
Query: 405 DKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADP 548
+ V + H P W E E L + + ++ S LA P
Sbjct: 93 NPENGV-VDPSHFPMLSNWRREFTMEDLL-IQLKKEMMSSQNRKLAQP 138
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 41.5 bits (93), Expect = 8e-04
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +3
Query: 231 SAGLIDDNDIY--KWEVLIIGPPD-TLYEGGFFKAHLNFPKEYPLRPPRMKFVTEI 389
S G+ D +DIY W IIGP + T++EG ++ L K+YP +PP ++F + I
Sbjct: 34 SYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 89
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 41.5 bits (93), Expect = 8e-04
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = +3
Query: 276 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIW--HPNIDKNGDVCISILHE-- 443
+I+G T Y+ G F + P +YP PP + + W +PN+ + G VC+S+L+
Sbjct: 885 VIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWT 944
Query: 444 -PGDDKWGYEKAS 479
G++ W + +S
Sbjct: 945 GRGNEVWDPKSSS 957
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +3
Query: 231 SAGLIDDNDIY--KWEVLIIGPPD-TLYEGGFFKAHLNFPKEYPLRPPRMKFVTEI 389
S G+ D +DIY W IIGP + T++EG ++ L K+YP +PP ++F + +
Sbjct: 35 SYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 90
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +3
Query: 276 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTE--IWHPNIDKNGDVCISILHEPG 449
+IIG T Y G F + FP YP PP + + + +PN+ G VC+S+L
Sbjct: 367 VIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLL---- 422
Query: 450 DDKWGYEKASERWLP-VHTVETILISVISML 539
W + E+W+P T+ +L+S+ ++
Sbjct: 423 -GTWSGNQ-REKWIPNTSTMLQVLVSIQGLI 451
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 279 IIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVT--EIWHPNIDKNGDVCISILH 440
++G P T Y G F + P +YP PP + + + +PN+ ++G VC+S+L+
Sbjct: 698 LVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLN 753
>At1g44000.1 68414.m05076 expressed protein
Length = 260
Score = 34.3 bits (75), Expect = 0.12
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -1
Query: 483 VLKLFHNPICHHLAREVLICRHHHFYQYLDAIFQSQIS 370
++ +H+P+ H RE+ RHHH +++ + + +IS
Sbjct: 5 IVPYYHHPVLSHPNREIFSHRHHHHHRFCNNLLNRRIS 42
>At4g10560.1 68417.m01729 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 703
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 456 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 346
C L R + I RHHH + + Q ++S GV K+I
Sbjct: 318 CIDLPRVIRISRHHHRISFTPSFDQERLSCGVCQKNI 354
>At3g61630.1 68416.m06907 AP2 domain-containing transcription
factor, putative transcription factor Pti6 -
Lycopersicon esculentum, PIR:T07728
Length = 315
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 168 QSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEV 275
QS+LL ++++ +N E F GLIDD + W+V
Sbjct: 268 QSTLLPNTEVSKQGENETEDFEFGLIDDFESSPWDV 303
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 399 NIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANV-D 575
NI+KN D + + D + AS W P +++ V+S + + +DE P + D
Sbjct: 29 NIEKNFDNALGF--DDKSDSAAEDAASSMWPPAVDTKSLFDPVMSFMGNTSDEKPDTLED 86
Query: 576 AAKEWRERYSEFKKKVARCVRKSQE 650
+ + E K++ A V+ + E
Sbjct: 87 SVRTENPSQIEQKEEEAGSVKLATE 111
>At1g48490.1 68414.m05420 protein kinase, putative similar to
incomplete root hair elongation (IRE) [Arabidopsis
thaliana] gi|6729346|dbj|BAA89783
Length = 878
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
Frame = +3
Query: 405 DKNGDVCISILHEPGDDK-WGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAA 581
D G + L P K + E+ W+ V +S + ESPAN+D
Sbjct: 48 DGKGSSTANALKVPSTKKAYSQEQRGLNWIEGFFVRPAPLSSPYNETSKDSESPANIDKM 107
Query: 582 KEWRERYSEFKKKVAR-CVRKSQEDCF*EQKDI*KRI 689
W+ S K V V K Q D E + K++
Sbjct: 108 SSWKRLPSPASKGVQEAAVSKEQNDRKVEPPQVVKKL 144
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 460 GVMKKLQNDGYLCTQLRLY*SVSFQCSLIQMMRVPLMLMLQKNGENDIRNSKRKLPDVLG 639
G K+ + YLC +L L + F L + PL++ +K G I + K PD++
Sbjct: 121 GPQGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGG-TSIEDLAEKFPDMII 179
Query: 640 KV 645
KV
Sbjct: 180 KV 181
>At3g23790.1 68416.m02990 AMP-binding protein, putative similar to
AMP-binding protein GB:CAA96521 from [Brassica napus]
(Plant Mol. Biol. (1997) 33 (5), 911-922); contains Pfam
AMP-binding enzyme domain PF00501; identical to cDNA
acyl-CoA synthetase-like protein GI:20799732
Length = 722
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 318 FKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGD--VCISILHEP 446
F L+ P+E L K V +IW +++K GD + H+P
Sbjct: 63 FLERLSLPREAALSSNEWKSVPDIWRSSVEKYGDRVAVVDPYHDP 107
>At2g33170.1 68415.m04064 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor protein kinase
[Pinus sylvestris] gi|12054894|emb|CAC20842; contains
leucine rich repeat (LRR) domains, Pfam:PF00560;
contains protein kinase domain, Pfam:PF00069
Length = 1124
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 626 GNFLFEFRISFSPFFCSINISGTLIIWISEH*NDTDQYSLNCVHR 492
G ++FEF+ F + TL++W SE N Q+ L +R
Sbjct: 2 GWWIFEFKKESKSMFVGVLFLLTLLVWTSESLNSDGQFLLELKNR 46
>At1g50750.1 68414.m05707 expressed protein
Length = 816
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 553 MRVPLMLMLQKNGENDIRNSKRKLPDVLGKVKKIASRSKRIFRKEYIYC*KRAIVTPANI 732
+ + L L K +D+RNS R + LGK+ ++ + + + + + + IV P+ I
Sbjct: 510 LSIAQFLRLNKKKYSDVRNSGRDASEPLGKISRVEADNNDLGTFQKLASIRDEIVPPSEI 569
>At2g02680.1 68415.m00207 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 649
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = -1
Query: 456 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 346
C ++ + + I RHHH + ++ + + S GV +++
Sbjct: 274 CIYIPQTIRISRHHHCISFTSSLLKGKWSCGVCRQEV 310
>At1g33340.1 68414.m04125 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to clathrin
assembly protein AP180 (GI:6492344) [Xenopus laevis]
Length = 374
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 763 KCITFFRXVVKCXPVSQWP 707
KC F V+KC PV WP
Sbjct: 190 KCQEFIAQVLKCSPVDAWP 208
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,759,653
Number of Sequences: 28952
Number of extensions: 375713
Number of successful extensions: 1201
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2275754832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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