Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E02
         (914 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    25   0.82 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    25   0.82 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    25   0.82 
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   4.4  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   5.8  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   7.7  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 11/42 (26%), Positives = 15/42 (35%)
 Frame = -3

Query: 447 LLNEQSASESSHQHTWLHXSAWDXRAESRYTPDRDHTSARKC 322
           LL         HQH +LH + +    +S Y      T    C
Sbjct: 115 LLRHHEEVADGHQHHFLHENKYQLEVDSGYHLGASSTPTNSC 156


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 11/42 (26%), Positives = 15/42 (35%)
 Frame = -3

Query: 447 LLNEQSASESSHQHTWLHXSAWDXRAESRYTPDRDHTSARKC 322
           LL         HQH +LH + +    +S Y      T    C
Sbjct: 115 LLRHHEEVADGHQHHFLHENKYQLEVDSGYHLGASSTPTNSC 156


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 11/42 (26%), Positives = 15/42 (35%)
 Frame = -3

Query: 447 LLNEQSASESSHQHTWLHXSAWDXRAESRYTPDRDHTSARKC 322
           LL         HQH +LH + +    +S Y      T    C
Sbjct: 115 LLRHHEEVADGHQHHFLHENKYQLEVDSGYHLGASSTPTNSC 156


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 7/38 (18%), Positives = 20/38 (52%)
 Frame = -3

Query: 438 EQSASESSHQHTWLHXSAWDXRAESRYTPDRDHTSARK 325
           ++  +++  QH + +   W  + E++Y P+  +  A +
Sbjct: 81  QKQGAKTVIQHLYKNKQDWWKQLEAKYDPEHTYVKAHE 118


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 363 RYTPDRDHTSARKCPRTTSEDTNR 292
           R+ PD  HT   KC  T    + +
Sbjct: 65  RHLPDALHTECSKCSETQKNGSKK 88


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 204 LRMTREFKSPEMLRYLLLIIVSCLTSYSLC 293
           L++ +  K  + L YLLL +++ L   +LC
Sbjct: 87  LKLLKGRKIRKNLYYLLLFVINVLYVLTLC 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,110
Number of Sequences: 336
Number of extensions: 3627
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25547951
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)