Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E02
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0063 - 630345-633743                                             29   3.9  
11_06_0616 + 25546175-25546359,25546778-25546837,25546939-255469...    29   6.8  
08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149           28   9.0  
06_03_0228 - 18439659-18440900,18441212-18441736,18441813-184421...    28   9.0  
04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789     28   9.0  
04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637     28   9.0  

>04_01_0063 - 630345-633743
          Length = 1132

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 297 SCPPTLSVDICEPMCGPGQ 353
           SCPP L V+I E +C P Q
Sbjct: 720 SCPPDLQVEILEGLCPPSQ 738


>11_06_0616 +
           25546175-25546359,25546778-25546837,25546939-25546957,
           25547948-25547998,25548097-25548230,25548558-25548948,
           25549840-25549890
          Length = 296

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 385 VGXQS*VPLHS*PGPHIGSQMSTDNVGGHEPHSEYDVRQ 269
           +G  +   L S PG     + STDN GG E H    V+Q
Sbjct: 152 IGCSASTSLQSYPGYFSMGKQSTDNAGGGEQHHHAAVQQ 190


>08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149
          Length = 916

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -3

Query: 564 PPQRVVTALGGARGQSESPGAKCGSRSTXRAETRG 460
           PP R   A GG RG+S   G + G R   R+ T G
Sbjct: 91  PPSRPPPAAGGGRGRSR--GGRGGGRGRGRSLTNG 123


>06_03_0228 -
           18439659-18440900,18441212-18441736,18441813-18442118,
           18442290-18442877
          Length = 886

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -3

Query: 564 PPQRVVTALGGARGQSESPGAKCGSRSTXRAETRG 460
           PP R   A GG RG+S   G + G R   R+ T G
Sbjct: 86  PPSRPPPAAGGGRGRSR--GGRGGGRGRGRSLTNG 118


>04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789
          Length = 877

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -3

Query: 564 PPQRVVTALGGARGQSESPGAKCGSRSTXRAETRG 460
           PP R   A GG RG+S   G + G R   R+ T G
Sbjct: 82  PPSRPPPAAGGGRGRSR--GGRGGGRGRGRSLTNG 114


>04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637
          Length = 504

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -3

Query: 564 PPQRVVTALGGARGQSESPGAKCGSRSTXRAETRG 460
           PP R   A GG RG+S   G + G R   R+ T G
Sbjct: 91  PPSRPPPAAGGGRGRSR--GGRGGGRGRGRSLTNG 123


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,435,674
Number of Sequences: 37544
Number of extensions: 454244
Number of successful extensions: 1081
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)