Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_E02
         (914 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89792-1|AAB94380.1|  339|Caenorhabditis elegans seven-in-absent...    30   2.7  
U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical pr...    30   2.7  
U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AC024759-5|AAK68432.1|  419|Caenorhabditis elegans Hypothetical ...    30   2.7  
Z71185-6|CAI46563.1|  286|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z73974-2|CAA98271.2|  713|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p...    28   8.1  
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ...    28   8.1  
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha...    28   8.1  

>U89792-1|AAB94380.1|  339|Caenorhabditis elegans seven-in-absentia 
           protein homologue-1 protein.
          Length = 339

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 222 FKSPEMLRYLLLIIVSCLTSYSLCGSCPPTLSVDICEPMC-GP 347
           F+ P  L Y+L   + C + + +C +C P L    C P C GP
Sbjct: 88  FECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQ---CCPTCRGP 127


>U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical
           protein F11D5.1c protein.
          Length = 769

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 440 MNKVPLSHRINTHGSTXVRGTXELSPVTLLTGTTHRLANV 321
           +NK P++H  +   +   + T  L PV + T T H+ ANV
Sbjct: 159 LNKTPVTHTTSAFIAHSNKPTPVLKPVEVQTQTQHKTANV 198


>U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical
           protein F11D5.1a protein.
          Length = 812

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 440 MNKVPLSHRINTHGSTXVRGTXELSPVTLLTGTTHRLANV 321
           +NK P++H  +   +   + T  L PV + T T H+ ANV
Sbjct: 202 LNKTPVTHTTSAFIAHSNKPTPVLKPVEVQTQTQHKTANV 241


>AC024759-5|AAK68432.1|  419|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.2 protein.
          Length = 419

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 222 FKSPEMLRYLLLIIVSCLTSYSLCGSCPPTLSVDICEPMC-GP 347
           F+ P  L Y+L   + C + + +C +C P L    C P C GP
Sbjct: 154 FECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQ---CCPTCRGP 193


>Z71185-6|CAI46563.1|  286|Caenorhabditis elegans Hypothetical
           protein C35A5.10 protein.
          Length = 286

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +3

Query: 267 SCLTSYSLCGSCPPTLSVDIC--EPMCGPGQECNGTQLXCPT 386
           SC+   ++C  CP   S   C  +  C  G EC GT   CP+
Sbjct: 210 SCVAG-NVCCRCPVGSSAGNCILQSDCSAGYECMGTGYCCPS 250


>Z73974-2|CAA98271.2|  713|Caenorhabditis elegans Hypothetical
           protein F29F11.4 protein.
          Length = 713

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 174 YEFVVIISTVLRMTREFKSPEMLRYLLLIIVSCLTSYSLC 293
           Y F+V ISTV      F++P+M+ +  L+I+  L   S+C
Sbjct: 275 YFFIVSISTVGLGDMLFRTPDMMVFNFLLILVGLALLSMC 314


>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
            protein T22A3.8 protein.
          Length = 3102

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
 Frame = +3

Query: 327  CEPMCGPGQECN--GTQLXCPTHXGGAMCVDAMTQRHFVH 440
            CEP   PGQ C+       CP +  G MC +  T     H
Sbjct: 1134 CEPCPAPGQVCDPIDGSCVCPPNTVGEMCENCTTNAWDYH 1173


>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
            protein T22A3.8 protein.
          Length = 3102

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
 Frame = +3

Query: 327  CEPMCGPGQECN--GTQLXCPTHXGGAMCVDAMTQRHFVH 440
            CEP   PGQ C+       CP +  G MC +  T     H
Sbjct: 1134 CEPCPAPGQVCDPIDGSCVCPPNTVGEMCENCTTNAWDYH 1173


>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
            chain protein.
          Length = 3102

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
 Frame = +3

Query: 327  CEPMCGPGQECN--GTQLXCPTHXGGAMCVDAMTQRHFVH 440
            CEP   PGQ C+       CP +  G MC +  T     H
Sbjct: 1134 CEPCPAPGQVCDPIDGSCVCPPNTVGEMCENCTTNAWDYH 1173


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,633,893
Number of Sequences: 27780
Number of extensions: 365265
Number of successful extensions: 986
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)