Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_E01
(928 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 42 1e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 40 4e-04
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 5e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.025
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.057
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 33 0.075
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.12
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.13
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.30
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.30
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 28 1.6
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 6.6
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 8.7
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 41.9 bits (94), Expect = 1e-04
Identities = 21/47 (44%), Positives = 21/47 (44%)
Frame = -1
Query: 832 GXXGGGGXFXLXRGGVXXXGXGGAPXGXXXGGGVXGGXXGGGGGGXG 692
G GG G F RGG G GGA G GG GG G GG G
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 35.1 bits (77), Expect = 0.014
Identities = 23/55 (41%), Positives = 24/55 (43%)
Frame = -1
Query: 832 GXXGGGGXFXLXRGGVXXXGXGGAPXGXXXGGGVXGGXXGGGGGGXGXXPAXGXR 668
G GG G F RGG G GGA G GG GG G GG G + G R
Sbjct: 13 GSRGGRGGFNGGRGGFGG-GRGGARGGGR--GGARGGRGGRGGARGGRGGSSGGR 64
Score = 30.7 bits (66), Expect = 0.30
Identities = 22/55 (40%), Positives = 22/55 (40%)
Frame = -1
Query: 832 GXXGGGGXFXLXRGGVXXXGXGGAPXGXXXGGGVXGGXXGGGGGGXGXXPAXGXR 668
G GG G RGG G GG G GG GG G GG G A G R
Sbjct: 6 GSRGGRGGSRGGRGGFNG-GRGG--FGGGRGGARGGGRGGARGGRGGRGGARGGR 57
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = -1
Query: 838 FXGXXGG-GGXFXLXRGGVXXXGXGGAPXGXXXGGGVXGGXXGGGGGGXG 692
F G GG GG RGG GG G G GG GG GG G
Sbjct: 21 FNGGRGGFGGGRGGARGGGRGGARGGR-GGRGGARGGRGGSSGGRGGAKG 69
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 40.3 bits (90), Expect = 4e-04
Identities = 30/86 (34%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = -1
Query: 925 GXXGXXGGXGGXVXG--GXXXXXXXXXXXXRFXGXXGGGGXFXLXRGGVXXXGXGGAPXG 752
G G GG GG G G G G GG GG G GG P G
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG--PGGFGGGPGG 246
Query: 751 XXXGGGVXGGXXGGGGGGXGXXPAXG 674
G G GG GG GGG G G
Sbjct: 247 FGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 37.5 bits (83), Expect = 0.003
Identities = 27/75 (36%), Positives = 27/75 (36%)
Frame = -1
Query: 916 GXXGGXGGXVXGGXXXXXXXXXXXXRFXGXXGGGGXFXLXRGGVXXXGXGGAPXGXXXGG 737
G GG G GG F G G G GG G GG P G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHH----HGG--HGGFGGGPGGFEGGP 237
Query: 736 GVXGGXXGGGGGGXG 692
G GG GG GGG G
Sbjct: 238 GGFGGGPGGFGGGLG 252
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.3 bits (80), Expect(2) = 5e-04
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 709 PPXNXPXPPPPPXPRXPXRPPXP 777
PP N P PPPPP P +PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 767 PPPXXXNPPPXQXKXPPPPXXXXK 838
PPP PP Q PPPP K
Sbjct: 12 PPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 723 PPXTPPPXXXPXGAPPXPXXXTPP 794
PP PPP P G P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 676 PXPVXTPXHPXPPXNXPXPPPP 741
P P P PP P PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 24.6 bits (51), Expect(2) = 2.0
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 297 FXPXFXPPPPPXPXF 253
F P PPPPP P +
Sbjct: 18 FEPPSQPPPPPPPGY 32
Score = 22.6 bits (46), Expect(2) = 5e-04
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 880 PXXPXPPPPP 909
P P PPPPP
Sbjct: 21 PSQPPPPPPP 30
Score = 21.4 bits (43), Expect(2) = 2.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 423 GXPPPPPXKXG 391
G PPPPP G
Sbjct: 7 GNPPPPPPPPG 17
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.025
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 726 PXTPPPXXXPXGAPPXPXXXTPPRXNXXIPPPPXXP 833
P + PP APP TPP +PPPP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 33.9 bits (74), Expect = 0.033
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +1
Query: 670 AXPXPVXTPXHPXPPXNXPXPP-PPPXPRXPXRPPXP 777
A P + P P PP + P PP PP P P P P
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 732 TPPPXXXPXGAPPXPXXXTPPRXNXXIPPPP 824
TPPP P PP P P PPPP
Sbjct: 1706 TPPPP--PMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect(2) = 0.58
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 3/35 (8%)
Frame = +1
Query: 682 PVXTPXHPXPPXNXPXPPPPP---XPRXPXRPPXP 777
P P PP PPPP P P PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 22.2 bits (45), Expect(2) = 0.58
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +1
Query: 874 PXPXXPXPPPPPXXPPXP 927
P P P PP PP P
Sbjct: 1717 PPSAPPMPAGPPSAPPPP 1734
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.057
Identities = 22/82 (26%), Positives = 23/82 (28%)
Frame = +1
Query: 682 PVXTPXHPXPPXNXPXPPPPPXPRXPXRPPXPXXKXXXXXXXXXXXXXXXPKTSXGSXXX 861
PV P PP P PP P PP P PK S +
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAA--P 1150
Query: 862 XXXXPXPXXPXPPPPPXXPPXP 927
P P P P PP P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVP 1172
Score = 29.1 bits (62), Expect = 0.93
Identities = 21/82 (25%), Positives = 21/82 (25%)
Frame = +1
Query: 682 PVXTPXHPXPPXNXPXPPPPPXPRXPXRPPXPXXKXXXXXXXXXXXXXXXPKTSXGSXXX 861
PV P PP P PP P PP P P S G
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG---- 1225
Query: 862 XXXXPXPXXPXPPPPPXXPPXP 927
P P PP P P
Sbjct: 1226 LPPVPVPTAKAPPVPAPSSEAP 1247
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/92 (25%), Positives = 26/92 (28%), Gaps = 6/92 (6%)
Frame = +1
Query: 670 AXPXPVXTPXHPXPPXNXPXPP------PPPXPRXPXRPPXPXXKXXXXXXXXXXXXXXX 831
A P PV + P P + PP PP P+ P P
Sbjct: 1130 APPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP-PVPAPSSGIPPVPKPAAGV 1188
Query: 832 PKTSXGSXXXXXXXPXPXXPXPPPPPXXPPXP 927
P S P P PPP PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 28.3 bits (60), Expect = 1.6
Identities = 23/84 (27%), Positives = 25/84 (29%), Gaps = 2/84 (2%)
Frame = +1
Query: 682 PVXTPXHPXPPXNXPXPPPPPXPRXPXRPPXPXXKXXXXXXXXXXXXXXXPKTSXGSXXX 861
PV PP P PP P PP P PK+S G+
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVP----------IPTSTPPVPKSSSGAPSA 1062
Query: 862 XXXXPXPXXPXP--PPPPXXPPXP 927
P P P P P PP P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/87 (25%), Positives = 25/87 (28%), Gaps = 1/87 (1%)
Frame = +1
Query: 670 AXPXPVXTPXHPXPPXNXPXP-PPPPXPRXPXRPPXPXXKXXXXXXXXXXXXXXXPKTSX 846
A P P+ T P P + P PPP P P PK S
Sbjct: 1040 APPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSV 1099
Query: 847 GSXXXXXXXPXPXXPXPPPPPXXPPXP 927
+ P P P P PP P
Sbjct: 1100 AA--PPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 26.2 bits (55), Expect = 6.6
Identities = 23/93 (24%), Positives = 23/93 (24%), Gaps = 9/93 (9%)
Frame = +1
Query: 676 PXPVXTPXHPXPPXNXPXPPP---------PPXPRXPXRPPXPXXKXXXXXXXXXXXXXX 828
P P TP P P PP P P PP P
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Query: 829 XPKTSXGSXXXXXXXPXPXXPXPPPPPXXPPXP 927
PK S P P P P PP P
Sbjct: 1104 VPKPSVA--VPPVPAPSGAPPVPKPSVAAPPVP 1134
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 32.7 bits (71), Expect = 0.075
Identities = 20/42 (47%), Positives = 20/42 (47%)
Frame = -1
Query: 823 GGGGXFXLXRGGVXXXGXGGAPXGXXXGGGVXGGXXGGGGGG 698
GG G F RGG G GG G GGG GG GG GG
Sbjct: 138 GGRGGFRGGRGG-SRGGFGGNSRGGF-GGGSRGGFGGGSRGG 177
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = -1
Query: 832 GXXGGGGXFXLXRGGVXXXGXGGAPXGXXXGGGVXGGXXGGGGGG 698
G GG G GG G GG G GGG GG GG GG
Sbjct: 142 GFRGGRGGSRGGFGGNSRGGFGGGSRG-GFGGGSRGGSRGGFRGG 185
Score = 29.1 bits (62), Expect = 0.93
Identities = 22/55 (40%), Positives = 23/55 (41%)
Frame = -1
Query: 832 GXXGGGGXFXLXRGGVXXXGXGGAPXGXXXGGGVXGGXXGGGGGGXGXXPAXGXR 668
G G GG RGG G GG+ G GG GG GG GG G G R
Sbjct: 133 GPAGRGG-----RGGFRG-GRGGSRGGF--GGNSRGGFGGGSRGGFGGGSRGGSR 179
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.30
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +3
Query: 723 PPXTPPPXXXPXGAPPXPXXXTPPRXNXXIPPPPXXPXNLXXXXXXXXXXXXPPXTXPPX 902
PP PP P AP P PP PPPP P + PP PP
Sbjct: 732 PPPPPPAVIVPTPAPA-PIPVPPPAPIMGGPPPPPPPPGV--------AGAGPPPPPPPP 782
Query: 903 P 905
P
Sbjct: 783 P 783
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 676 PXPVXTPXHPXPPXNXPXPPPPPXPRXPXRPPXP 777
P P P P P PPPPP P P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 28.3 bits (60), Expect(2) = 0.12
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +1
Query: 676 PXPVXTPXHPXP-PXNXPXPPPPPXPRXPXRPPXP 777
P P P P P P PPP P P PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Frame = +1
Query: 676 PXPVXT-PXHPXPPXNX----PXPPPPPXP 750
P P+ P P PP P PPPPP P
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 22.2 bits (45), Expect(2) = 0.12
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +1
Query: 874 PXPXXPXPPPPPXXPPXP 927
P P PPP PP P
Sbjct: 766 PPPGVAGAGPPPPPPPPP 783
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/78 (25%), Positives = 21/78 (26%)
Frame = +1
Query: 676 PXPVXTPXHPXPPXNXPXPPPPPXPRXPXRPPXPXXKXXXXXXXXXXXXXXXPKTSXGSX 855
P P PP + P P P P PP P P S S
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 856 XXXXXXPXPXXPXPPPPP 909
P P PPPP
Sbjct: 188 PSLPSAVPPMPPKVPPPP 205
Score = 29.5 bits (63), Expect = 0.70
Identities = 22/67 (32%), Positives = 23/67 (34%)
Frame = +3
Query: 726 PXTPPPXXXPXGAPPXPXXXTPPRXNXXIPPPPXXPXNLXXXXXXXXXXXXPPXTXPPXP 905
P PPP P APP P PP + PPP P P PP P
Sbjct: 147 PSIPPPS--PASAPPIP-SKAPPIPSSL--PPPAQP---AAPVKSPPSAPSLPSAVPPMP 198
Query: 906 PXXPXXP 926
P P P
Sbjct: 199 PKVPPPP 205
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.7 bits (66), Expect = 0.30
Identities = 21/82 (25%), Positives = 23/82 (28%)
Frame = +1
Query: 676 PXPVXTPXHPXPPXNXPXPPPPPXPRXPXRPPXPXXKXXXXXXXXXXXXXXXPKTSXGSX 855
P P P P PPPPP P + P +
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPP-----TY 227
Query: 856 XXXXXXPXPXXPXPPPPPXXPP 921
P P P PPPPP PP
Sbjct: 228 TPKQADPLP-APPPPPPPTLPP 248
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +3
Query: 723 PPXTPPPXXXPXGAPPXPXXXTPPRXNXXIPPPPXXPXNLXXXXXXXXXXXXPPXTXPPX 902
PP P P APP P T P + P N+ PP P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNV--NNLGSQVNIPPPPATPSQ 281
Query: 903 PPXXP 917
PP P
Sbjct: 282 PPRPP 286
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 730 PPPPPXPRXPXRPP 771
PPPP P P RPP
Sbjct: 273 PPPPATPSQPPRPP 286
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/66 (27%), Positives = 19/66 (28%), Gaps = 2/66 (3%)
Frame = +3
Query: 726 PXTPPPXXXPXGAPPXPXXXTPPRXNXXIPPPPXXPXNLXXXXXXXXXXXXPPXTXP--P 899
P P P P APP PP P P P + P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 900 XPPXXP 917
PP P
Sbjct: 475 APPPAP 480
Score = 30.7 bits (66), Expect = 0.30
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 670 AXPXPVXTPXHPXPPXNXPXPPPPPXPRXPXRPPXP 777
A P P P P P P PP P P P PP P
Sbjct: 446 APPLPPSAPIAPPLPAGMPAAPPLP-PAAPAPPPAP 480
Score = 29.5 bits (63), Expect = 0.70
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 670 AXPXPVXTPXHPXPPXNXPXPPPPPXP 750
A P P P P P P PPP P P
Sbjct: 456 APPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 29.1 bits (62), Expect = 0.93
Identities = 22/82 (26%), Positives = 26/82 (31%), Gaps = 9/82 (10%)
Frame = +1
Query: 703 PXPPXNXPXPPPPPXPRXP--XRPPXPXXKXXXXXXXXXXXXXXXPKTS-----XGSXXX 861
P PP PPPPP P R P P +++ G+
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASR 411
Query: 862 XXXXPXPXXPXPPP--PPXXPP 921
P P P PP PP PP
Sbjct: 412 TSTPPVPTPPSLPPSAPPSLPP 433
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/82 (25%), Positives = 22/82 (26%), Gaps = 6/82 (7%)
Frame = +1
Query: 682 PVXTPXHPXPPXNXPXPPPPPXP------RXPXRPPXPXXKXXXXXXXXXXXXXXXPKTS 843
P P P + P PPP P P P PP P P S
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPS 296
Query: 844 XGSXXXXXXXPXPXXPXPPPPP 909
P PPPPP
Sbjct: 297 -SRVSAAALAANKKRPPPPPPP 317
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/66 (25%), Positives = 19/66 (28%)
Frame = +1
Query: 724 PXPPPPPXPRXPXRPPXPXXKXXXXXXXXXXXXXXXPKTSXGSXXXXXXXPXPXXPXPPP 903
P PPPPP R +PP P + P PPP
Sbjct: 311 PPPPPPPSRRNRGKPP------IGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Query: 904 PPXXPP 921
PP P
Sbjct: 365 PPRSAP 370
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 769 GGAPXGXXXGGGVXGGXXGGGGGGXGXXP 683
GGAP G GG+ GG GG GG P
Sbjct: 612 GGAPGGAP--GGMPGGAPGGAPGGADNGP 638
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/36 (30%), Positives = 13/36 (36%)
Frame = +3
Query: 735 PPPXXXPXGAPPXPXXXTPPRXNXXIPPPPXXPXNL 842
PP P G P P P N + PP P +
Sbjct: 494 PPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGM 529
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 682 PVXTPXHPXPPXNXPXPPPPPXPR 753
P T P P PP PP PR
Sbjct: 208 PAATAASTASPVKKPPPPAPPKPR 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.144 0.483
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,706,112
Number of Sequences: 5004
Number of extensions: 23416
Number of successful extensions: 285
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
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