Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_D23
(947 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P53618 Cluster: Coatomer subunit beta; n=58; Eukaryota|... 250 3e-65
UniRef50_P41810 Cluster: Coatomer subunit beta; n=16; Ascomycota... 151 3e-35
UniRef50_A3M067 Cluster: Predicted protein; n=3; Ascomycota|Rep:... 149 8e-35
UniRef50_Q9UUF7 Cluster: Coatomer subunit beta; n=1; Schizosacch... 149 1e-34
UniRef50_A4RW30 Cluster: Predicted protein; n=2; Ostreococcus|Re... 147 4e-34
UniRef50_A6QWQ7 Cluster: Coatomer beta subunit; n=12; Dikarya|Re... 142 2e-32
UniRef50_Q9SV21 Cluster: Coatomer subunit beta-1; n=88; Viridipl... 140 5e-32
UniRef50_Q4GYW5 Cluster: Coatomer beta subunit; n=2; Trypanosoma... 130 4e-29
UniRef50_A3FQR5 Cluster: Putative uncharacterized protein; n=3; ... 123 6e-27
UniRef50_A5K0V2 Cluster: Coatamer protein, beta subunit, putativ... 122 2e-26
UniRef50_Q4QCR1 Cluster: Coatomer beta subunit, putative; n=4; T... 119 1e-25
UniRef50_Q8ILG6 Cluster: Coatamer protein, beta subunit, putativ... 118 2e-25
UniRef50_Q7RQ31 Cluster: Coatomer beta subunit; n=4; Plasmodium ... 116 1e-24
UniRef50_A0BYB4 Cluster: Chromosome undetermined scaffold_136, w... 114 4e-24
UniRef50_Q23JD9 Cluster: Adaptin N terminal region family protei... 112 1e-23
UniRef50_Q9U4N3 Cluster: Beta coatomer; n=1; Toxoplasma gondii|R... 107 4e-22
UniRef50_A7AS75 Cluster: Coatamer beta subunit, putative; n=1; B... 104 3e-21
UniRef50_A2DHS1 Cluster: Adaptin N terminal region family protei... 93 1e-17
UniRef50_Q1EQ38 Cluster: Beta2-COP; n=2; Entamoeba histolytica|R... 90 7e-17
UniRef50_Q4N7Y3 Cluster: Coatomer beta subunit, putative; n=1; T... 89 1e-16
UniRef50_Q1EQ39 Cluster: Beta1-COP; n=1; Entamoeba histolytica|R... 79 2e-13
UniRef50_Q4UHM1 Cluster: Coatamer, beta subunit, putative; n=1; ... 78 4e-13
UniRef50_Q8SRB1 Cluster: COATOMER COMPLEX BETA SUBUNIT; n=1; Enc... 68 4e-10
UniRef50_A2FM03 Cluster: Putative uncharacterized protein; n=1; ... 67 7e-10
UniRef50_Q6E6I0 Cluster: Coatomer complex beta subunit; n=1; Ant... 66 2e-09
UniRef50_Q7R211 Cluster: GLP_163_4671_7817; n=1; Giardia lamblia... 57 6e-07
UniRef50_Q6Y0X8 Cluster: Coatomer-like protein beta subunit; n=1... 52 2e-05
UniRef50_A2ER45 Cluster: Adaptin N terminal region family protei... 51 5e-05
UniRef50_A5K978 Cluster: Adapter-related protein complex 1 beta ... 50 9e-05
UniRef50_Q00YY7 Cluster: Vesicle coat complex AP-1/AP-2/AP-4, be... 49 2e-04
UniRef50_Q86X54 Cluster: AP1B1 protein; n=9; Eumetazoa|Rep: AP1B... 49 2e-04
UniRef50_Q10567 Cluster: AP-1 complex subunit beta-1; n=112; Euk... 49 2e-04
UniRef50_O00203 Cluster: AP-3 complex subunit beta-1; n=46; Eume... 48 3e-04
UniRef50_A0DHA8 Cluster: Chromosome undetermined scaffold_50, wh... 46 0.001
UniRef50_A2DAM8 Cluster: Adaptin N terminal region family protei... 45 0.002
UniRef50_Q9M650 Cluster: Beta-adaptin-like protein B; n=16; Euka... 44 0.004
UniRef50_O45718 Cluster: Putative uncharacterized protein apb-3;... 44 0.004
UniRef50_Q22WH8 Cluster: Adaptin N terminal region family protei... 44 0.006
UniRef50_Q23Q76 Cluster: Adaptin N terminal region family protei... 44 0.008
UniRef50_A0DRP1 Cluster: Chromosome undetermined scaffold_60, wh... 43 0.013
UniRef50_A2DXB3 Cluster: Adaptin N terminal region family protei... 42 0.030
UniRef50_Q5KDA3 Cluster: Clathrin binding protein, putative; n=2... 41 0.040
UniRef50_Q23C04 Cluster: Adaptin N terminal region family protei... 36 1.1
UniRef50_Q1EQ25 Cluster: Beta subunit isoform c; n=1; Entamoeba ... 36 1.1
UniRef50_Q7S6M1 Cluster: Putative uncharacterized protein NCU048... 36 1.1
UniRef50_Q9LMQ1 Cluster: F7H2.17 protein; n=2; Arabidopsis thali... 35 2.6
UniRef50_Q2H247 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_Q7QZ72 Cluster: GLP_22_12403_9005; n=2; Giardia intesti... 35 3.5
UniRef50_Q86AM8 Cluster: Similar to Homo sapiens (Human). Adapte... 34 4.6
UniRef50_Q7Z451 Cluster: Beta adaptin subunit; n=14; Eukaryota|R... 34 6.1
>UniRef50_P53618 Cluster: Coatomer subunit beta; n=58;
Eukaryota|Rep: Coatomer subunit beta - Homo sapiens
(Human)
Length = 953
Score = 250 bits (613), Expect = 3e-65
Identities = 128/201 (63%), Positives = 141/201 (70%), Gaps = 1/201 (0%)
Frame = +3
Query: 99 MAVVEQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLM 278
M E CYTLIN P D EP +E+ LK DLEKGD K K EALKK I +IL+GEK+PGLLM
Sbjct: 1 MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM 60
Query: 279 IIIRFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGST 458
IIRFVLPLQDH IKKLLL+FWEIVPKT+PDG+LL EMILVCDAY KDLQHPNEFIRGST
Sbjct: 61 TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST 120
Query: 459 XXXXXXXXXXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTIYRTL-XVPPXS*XPRSXY 635
MPAIRACLEHRHSYVRRNAVLAI TIYR + P +
Sbjct: 121 LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDA---PELI 177
Query: 636 HTXLETEPXXSCQRNAXXLXL 698
H L E SC+RNA + +
Sbjct: 178 HDFLVNEKDASCKRNAFMMLI 198
>UniRef50_P41810 Cluster: Coatomer subunit beta; n=16;
Ascomycota|Rep: Coatomer subunit beta - Saccharomyces
cerevisiae (Baker's yeast)
Length = 973
Score = 151 bits (365), Expect = 3e-35
Identities = 78/192 (40%), Positives = 118/192 (61%), Gaps = 2/192 (1%)
Frame = +3
Query: 114 QPCYTLINFPT-DLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIR 290
QP YTL+ P+ +E + + LEKG ++KI+ +K + +L G +P LLM IIR
Sbjct: 7 QPAYTLVFDPSPSMETYSSTDFQKALEKGSDEQKIDTMKSILVTMLEGNPMPELLMHIIR 66
Query: 291 FVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXX 470
FV+P ++ +KKLL +WEIVPK + DGKL EMILVC+A DLQHPNE+IRG+T
Sbjct: 67 FVMPSKNKELKKLLYFYWEIVPKLAEDGKLRHEMILVCNAIQHDLQHPNEYIRGNTLRFL 126
Query: 471 XXXXXXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTIYR-TLXVPPXS*XPRSXYHTXL 647
+P++ ACLE+RH+YVR+ A+LA+ +I++ + + P + + ++ +
Sbjct: 127 TKLREAELLEQMVPSVLACLEYRHAYVRKYAILAVFSIFKVSEHLLPDA---KEIINSFI 183
Query: 648 ETEPXXSCQRNA 683
E C+RNA
Sbjct: 184 VAETDPICKRNA 195
>UniRef50_A3M067 Cluster: Predicted protein; n=3; Ascomycota|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 947
Score = 149 bits (362), Expect = 8e-35
Identities = 72/156 (46%), Positives = 100/156 (64%)
Frame = +3
Query: 123 YTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLP 302
YTLI P + + K LEKG + K+EA+KK + IL+G+ +P LLM IIRFV+P
Sbjct: 6 YTLIYDPNAASKTSVNEFKTLLEKGKDEAKVEAMKKILISILNGDPMPDLLMHIIRFVMP 65
Query: 303 LQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXX 482
++ +KKLL +WE+ PK GK+ EMILVC+A +DLQHPNE+IRG+T
Sbjct: 66 SKNKELKKLLYHYWEVCPKMDDQGKMRHEMILVCNAIQRDLQHPNEYIRGNTLRYLTKLK 125
Query: 483 XXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTIYR 590
+P +R CLEHRH+YVR+NAV A+ +I++
Sbjct: 126 EAELLETLVPNVRQCLEHRHAYVRKNAVFALHSIHK 161
>UniRef50_Q9UUF7 Cluster: Coatomer subunit beta; n=1;
Schizosaccharomyces pombe|Rep: Coatomer subunit beta -
Schizosaccharomyces pombe (Fission yeast)
Length = 940
Score = 149 bits (360), Expect = 1e-34
Identities = 75/190 (39%), Positives = 113/190 (59%), Gaps = 2/190 (1%)
Frame = +3
Query: 120 CYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVL 299
C+TL+ LE + LK LE + KI A+K + ++++G+ +P +LM +IRFV+
Sbjct: 3 CWTLVQ-QDFLEAPSVDALKTSLESKNDYVKISAMKTILRVVINGDSLPSILMHVIRFVM 61
Query: 300 PLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXX 479
P ++ +KKLL +WE+ PK + DG + QEMIL C+++ DLQHPNEFIRG+T
Sbjct: 62 PSRNKELKKLLYYYWEVCPKYNNDGTMKQEMILACNSFRNDLQHPNEFIRGATLRFLCKL 121
Query: 480 XXXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTIYRTL--XVPPXS*XPRSXYHTXLET 653
+P +R CLEHRH+YVR+NA+LA+ +IY+ +P + S L
Sbjct: 122 KEPELLDPLIPTVRQCLEHRHAYVRKNAILAVFSIYQVSNHLIPDAA----SLAEDFLAA 177
Query: 654 EPXXSCQRNA 683
E +C+RNA
Sbjct: 178 ESEGTCKRNA 187
>UniRef50_A4RW30 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 936
Score = 147 bits (356), Expect = 4e-34
Identities = 73/161 (45%), Positives = 103/161 (63%)
Frame = +3
Query: 105 VVEQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMII 284
VVE+ C L++F + ++LK LE G+ ++K +A+KK I ++LSGE IP + + I
Sbjct: 7 VVERGCSMLVHFD---RATSAVELKEALETGNAEEKADAMKKVISLLLSGEAIPQVFITI 63
Query: 285 IRFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXX 464
+R+VLP DH ++KLLL++ E++ K DGK+L EMIL+C +LQHPNEF+RG T
Sbjct: 64 VRYVLPSDDHTVQKLLLLYMEMIEKCGADGKILPEMILLCQNLRNNLQHPNEFLRGCTLR 123
Query: 465 XXXXXXXXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTIY 587
+P+I LEHRHSYVRRNAV+AI IY
Sbjct: 124 FLCRITEPDLLEPLIPSIVQNLEHRHSYVRRNAVMAINKIY 164
>UniRef50_A6QWQ7 Cluster: Coatomer beta subunit; n=12; Dikarya|Rep:
Coatomer beta subunit - Ajellomyces capsulatus NAm1
Length = 956
Score = 142 bits (343), Expect = 2e-32
Identities = 76/195 (38%), Positives = 114/195 (58%)
Frame = +3
Query: 99 MAVVEQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLM 278
MA + Y+L++ + LK LEKG + KI+ +++ + ++L+G+ +P LLM
Sbjct: 1 MASYLENAYSLVHQDNVADQPTLQDLKTQLEKGTDESKIDTMRRILIVMLNGDPMPQLLM 60
Query: 279 IIIRFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGST 458
IIRFV+P + +KKLL ++EI PK +GKL QEMILVC+ DLQHPNE+IRG+T
Sbjct: 61 HIIRFVMPSKSKPLKKLLYFYYEICPKLDSNGKLKQEMILVCNGIRNDLQHPNEYIRGNT 120
Query: 459 XXXXXXXXXXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTIYRTLXVPPXS*XPRSXYH 638
+ + RACL+HRH+YVR+NAV A+ +I++ L P
Sbjct: 121 LRFLCKLKEPELLEPLLSSTRACLDHRHAYVRKNAVWAVASIFQ-LSESLIPDAP-DLIQ 178
Query: 639 TXLETEPXXSCQRNA 683
T L ++ +C+RNA
Sbjct: 179 TFLGSQVDPTCRRNA 193
>UniRef50_Q9SV21 Cluster: Coatomer subunit beta-1; n=88;
Viridiplantae|Rep: Coatomer subunit beta-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 948
Score = 140 bits (339), Expect = 5e-32
Identities = 73/176 (41%), Positives = 101/176 (57%)
Frame = +3
Query: 156 PCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLL 335
P ++K LE D + K++A+KK I ++L+GE IP L + IIR+VLP +DH I+KLLL
Sbjct: 16 PAVANEIKEALEGNDVEAKVDAMKKAIMLLLNGETIPQLFITIIRYVLPSEDHTIQKLLL 75
Query: 336 IFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPA 515
++ E++ KT GK+L EMIL+C +LQHPNE+IRG T P+
Sbjct: 76 LYLELIEKTDSKGKVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRMKETEIVEPLTPS 135
Query: 516 IRACLEHRHSYVRRNAVLAIXTIYRTLXVPPXS*XPRSXYHTXLETEPXXSCQRNA 683
+ LEHRH +VRRNA+LAI +IY+ L TE S +RNA
Sbjct: 136 VLQNLEHRHPFVRRNAILAIMSIYKLPQGDQLFVDAPEMIEKVLSTEQDPSAKRNA 191
>UniRef50_Q4GYW5 Cluster: Coatomer beta subunit; n=2; Trypanosoma
brucei|Rep: Coatomer beta subunit - Trypanosoma brucei
Length = 982
Score = 130 bits (315), Expect = 4e-29
Identities = 65/145 (44%), Positives = 87/145 (60%)
Frame = +3
Query: 156 PCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLL 335
P N +LK LEKGD K + AL+ I + L+GE ++M +I+F+ PL DH IKKL+L
Sbjct: 19 PVNSKELKSALEKGDMKARASALEALIRMHLNGEPQNHMIMTVIKFITPLDDHYIKKLVL 78
Query: 336 IFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPA 515
FWE+V KT GKLL EMIL+C +DL HPNE+IRG + +
Sbjct: 79 YFWEVVDKTDASGKLLSEMILICSFLREDLLHPNEYIRGLALRFMCKVKERELVEPLVSS 138
Query: 516 IRACLEHRHSYVRRNAVLAIXTIYR 590
+ L HR +YVRRNAVLA+ I++
Sbjct: 139 VVQNLTHRVTYVRRNAVLAVHRIFK 163
>UniRef50_A3FQR5 Cluster: Putative uncharacterized protein; n=3;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 1330
Score = 123 bits (297), Expect = 6e-27
Identities = 66/164 (40%), Positives = 93/164 (56%)
Frame = +3
Query: 111 EQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIR 290
E+ C L+ + +L+ LE +K +AL++ I + GE LLM +IR
Sbjct: 5 EKNCTLLVPAIVGSNAPSSSELQKRLEDPSDNEKCKALRELIIWMTHGESYNRLLMTVIR 64
Query: 291 FVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXX 470
+V+ +H +KK L ++WEIV K + DG L +EMILVC+A DLQHPNE+IRGST
Sbjct: 65 YVVQSTNHKVKKYLQLYWEIVEKCNSDGSLKEEMILVCNALRNDLQHPNEYIRGSTLRLL 124
Query: 471 XXXXXXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTIYRTLXV 602
+ +I L+HRHSYVRRNAV+ I +I +T V
Sbjct: 125 CNLRFIKLIQPLIESILENLQHRHSYVRRNAVMCIYSIIKTFGV 168
>UniRef50_A5K0V2 Cluster: Coatamer protein, beta subunit, putative;
n=1; Plasmodium vivax|Rep: Coatamer protein, beta
subunit, putative - Plasmodium vivax
Length = 1311
Score = 122 bits (293), Expect = 2e-26
Identities = 64/161 (39%), Positives = 93/161 (57%)
Frame = +3
Query: 108 VEQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIII 287
+E+ C TL + E + +++ LE + +KKIE ++ I I+ GE LLM +I
Sbjct: 6 LEKNC-TLYICTDNCETASNSEIQKKLESQNVEKKIEGMEHLIFNIIQGEPCGNLLMCVI 64
Query: 288 RFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXX 467
RF++P +DH +KKL IF+E+V K DG L +EM+LVC+A D+ PNE++RGST
Sbjct: 65 RFIVPHKDHRLKKLTHIFFEVVDKCKSDGSLKEEMLLVCNALRNDIISPNEYVRGSTLRL 124
Query: 468 XXXXXXXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTIYR 590
+ AI L HRHSYVR+NA+ I TI +
Sbjct: 125 LSKIKNLKIIEPLIEAITKNLSHRHSYVRKNAISCIHTIIK 165
>UniRef50_Q4QCR1 Cluster: Coatomer beta subunit, putative; n=4;
Trypanosomatidae|Rep: Coatomer beta subunit, putative -
Leishmania major
Length = 999
Score = 119 bits (286), Expect = 1e-25
Identities = 59/138 (42%), Positives = 82/138 (59%)
Frame = +3
Query: 171 QLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEI 350
++K LEKGDT + AL I + ++GE L+M +IR++ P+ DH+IKKL+L FWE+
Sbjct: 30 EIKNALEKGDTTARANALMAIIRLHVNGEPQNYLIMTVIRYITPIDDHLIKKLVLYFWEV 89
Query: 351 VPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACL 530
V K DGKLL +IL+C DL HPNE++RG T + A+ L
Sbjct: 90 VDKRDADGKLLSVIILICSFLRSDLLHPNEYVRGLTLRFLCKVNEVELIEPLVSAVVQNL 149
Query: 531 EHRHSYVRRNAVLAIXTI 584
H+ +YVRRNAVLA+ I
Sbjct: 150 SHKVAYVRRNAVLAVHYI 167
>UniRef50_Q8ILG6 Cluster: Coatamer protein, beta subunit, putative;
n=3; Plasmodium|Rep: Coatamer protein, beta subunit,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1394
Score = 118 bits (284), Expect = 2e-25
Identities = 62/143 (43%), Positives = 85/143 (59%)
Frame = +3
Query: 162 NEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIF 341
NE+Q KL+ + D KKIE ++ I I+ G LLM +IR+++P +DH +KK+ IF
Sbjct: 25 NEIQKKLESQNVD--KKIEGMENLIFNIIQGVSYENLLMCVIRYIVPHKDHRLKKMCHIF 82
Query: 342 WEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIR 521
+EIV K + DG L +EMILVC+A D+ PNE++RGST M I
Sbjct: 83 FEIVDKCNSDGSLKEEMILVCNALRNDIISPNEYVRGSTLRLLSKIKYLKILDPLMETIT 142
Query: 522 ACLEHRHSYVRRNAVLAIXTIYR 590
L HRHSYVR+NA+ I TI +
Sbjct: 143 KNLGHRHSYVRKNAITCIHTIIK 165
>UniRef50_Q7RQ31 Cluster: Coatomer beta subunit; n=4; Plasmodium
(Vinckeia)|Rep: Coatomer beta subunit - Plasmodium
yoelii yoelii
Length = 1286
Score = 116 bits (278), Expect = 1e-24
Identities = 61/148 (41%), Positives = 87/148 (58%)
Frame = +3
Query: 147 DLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKK 326
++ +E+Q KL+ + D K IE ++ I I+ GE LLM +IRF++P +DH +KK
Sbjct: 20 EIPSVSEIQKKLESQNVDNK--IEGMENLIFNIIQGEPYGNLLMYVIRFIVPHKDHRLKK 77
Query: 327 LLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXX 506
+ IF+E+V K + DG L +EMILVC+A DL PNE++RGST
Sbjct: 78 MCHIFFEVVDKCNNDGNLKEEMILVCNALRNDLISPNEYVRGSTLRLLSKIKYLKILDPL 137
Query: 507 MPAIRACLEHRHSYVRRNAVLAIXTIYR 590
+ AI L H HSYVR+NA+ I TI +
Sbjct: 138 IEAITKNLNHSHSYVRKNAISCIHTIIK 165
>UniRef50_A0BYB4 Cluster: Chromosome undetermined scaffold_136,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_136,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 907
Score = 114 bits (274), Expect = 4e-24
Identities = 59/162 (36%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Frame = +3
Query: 108 VEQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIII 287
V++ C + P D P + ++ + G K++ALK + I+ E++P ++M +I
Sbjct: 6 VDRMCSVYV-IPEDA-PMSSQEIAKAFDTGKFDDKLKALKSLVIQIIHDEQMPRMVMNVI 63
Query: 288 RFVLPLQD--HMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTX 461
++PL D H +KK+LL +WE++ KT P+G L +EMILVC++ KDL HPNE+IRG T
Sbjct: 64 NSLVPLSDETHSLKKILLFYWEVIEKTHPNGSLKEEMILVCNSLRKDLLHPNEYIRGRTL 123
Query: 462 XXXXXXXXXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTIY 587
AI + H+H YVRRNAV+ + I+
Sbjct: 124 KLLSRIQLRGILEPLQTAIVENVTHKHVYVRRNAVVCLYEIF 165
>UniRef50_Q23JD9 Cluster: Adaptin N terminal region family protein;
n=1; Tetrahymena thermophila SB210|Rep: Adaptin N
terminal region family protein - Tetrahymena thermophila
SB210
Length = 959
Score = 112 bits (269), Expect = 1e-23
Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 2/157 (1%)
Frame = +3
Query: 123 YTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLP 302
Y I + E ++K L G ++KI+ LK I I+ E L M II +++P
Sbjct: 16 YCSIYIRAEQEQLTPQEIKT-LLMGKYEEKIKGLKSLIYAIIQDENFDKLTMTIITYLVP 74
Query: 303 LQ--DHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXX 476
Q +H +KK+LL +WEI+ K + DGKL EMILVC++ DL HPNE++RG T
Sbjct: 75 YQAENHDLKKILLYYWEIIEKVNKDGKLKDEMILVCNSLRSDLLHPNEYLRGRTLRLVSR 134
Query: 477 XXXXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTIY 587
+ +I L H+H+YVRRNA++AI I+
Sbjct: 135 IMYKGILEPLISSIMESLNHKHTYVRRNAIIAIYQIF 171
>UniRef50_Q9U4N3 Cluster: Beta coatomer; n=1; Toxoplasma gondii|Rep:
Beta coatomer - Toxoplasma gondii
Length = 1103
Score = 107 bits (257), Expect = 4e-22
Identities = 55/140 (39%), Positives = 79/140 (56%)
Frame = +3
Query: 171 QLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEI 350
+L+ +E + K E ++ I + GE LLM +IR+ +P +D +KKL ++ EI
Sbjct: 23 ELQKKIESPNEATKAEGMQDLIIGMTQGEAYTRLLMTVIRYAMPSKDKRVKKLTQLYLEI 82
Query: 351 VPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACL 530
V K PDG L +EMIL+C+A DL PNE++RGST + AI L
Sbjct: 83 VGKCRPDGSLKEEMILICNALRNDLMSPNEYVRGSTLRLLSKIRQFKVLEPLVEAILQNL 142
Query: 531 EHRHSYVRRNAVLAIXTIYR 590
HRHSYVRRNAV+ + +I +
Sbjct: 143 THRHSYVRRNAVMCVYSIVK 162
>UniRef50_A7AS75 Cluster: Coatamer beta subunit, putative; n=1;
Babesia bovis|Rep: Coatamer beta subunit, putative -
Babesia bovis
Length = 993
Score = 104 bits (250), Expect = 3e-21
Identities = 57/137 (41%), Positives = 77/137 (56%)
Frame = +3
Query: 174 LKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIV 353
++ LE+ T KK EAL+ TI +L+GE + LLM IIRFVLP DH +KKL+ +F +I
Sbjct: 31 IRSKLEETSTSKKKEALELTITNLLNGEDVSSLLMTIIRFVLPSTDHGLKKLVHLFLQIF 90
Query: 354 PKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACLE 533
SPDG L +E ILVC+A DL NE++RGST + + L
Sbjct: 91 DFCSPDGTLREESILVCNALLNDLNSSNEYVRGSTLRLVSKLRHWSIVSPLITGVVDNLR 150
Query: 534 HRHSYVRRNAVLAIXTI 584
H YV RNA++ + I
Sbjct: 151 HGEPYVHRNALMCLAKI 167
>UniRef50_A2DHS1 Cluster: Adaptin N terminal region family protein;
n=1; Trichomonas vaginalis G3|Rep: Adaptin N terminal
region family protein - Trichomonas vaginalis G3
Length = 900
Score = 92.7 bits (220), Expect = 1e-17
Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Frame = +3
Query: 201 TKKKIEALKKTIGIILSGEKIP-GLLMIIIRFVLPLQDHMIKKLLLIFWEIVPKTSPDGK 377
T+ +I +L+K I +SGEKIP LM +I + ++H +KKLL +F+EI G
Sbjct: 32 TEVQISSLRKLIQYSVSGEKIPEAALMGVITNLSASKNHDVKKLLYLFYEICETRDRKGN 91
Query: 378 LLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACLEHRHSYVRR 557
L E L+CD KDL HPNE+IR + +P + L+H ++YVRR
Sbjct: 92 LKPEFRLICDGIRKDLTHPNEYIRAAALRFMSRFHEKELINTLVPFVTKSLDHHNAYVRR 151
Query: 558 NAVLAIXTIYRTLXVPPXS*XPRSXYHTXLETEPXXSCQR 677
+AV+AI I++ P + + L+TE +C R
Sbjct: 152 HAVVAIGRIHQRW--PEIAPDAQEDIAELLKTEKDPACMR 189
>UniRef50_Q1EQ38 Cluster: Beta2-COP; n=2; Entamoeba histolytica|Rep:
Beta2-COP - Entamoeba histolytica
Length = 910
Score = 90.2 bits (214), Expect = 7e-17
Identities = 52/135 (38%), Positives = 72/135 (53%)
Frame = +3
Query: 186 LEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIVPKTS 365
L + D K KI AL K I L+G+ P LLM +IR +P +H IK+L+LI+ E + K
Sbjct: 25 LSQTDVKSKITALTKIITAELNGDHHPELLMEVIRNAMPCTEHQIKRLVLIYLESIDKMD 84
Query: 366 PDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACLEHRHS 545
G+L E+IL + +DL HPNE+IRG T + AI + H+H
Sbjct: 85 -KGELRPELILAINGLLQDLNHPNEYIRGITLKFLCHVSEKEIIQPLVNAILENMTHKHV 143
Query: 546 YVRRNAVLAIXTIYR 590
YVR+ AI IY+
Sbjct: 144 YVRKATANAIGHIYQ 158
>UniRef50_Q4N7Y3 Cluster: Coatomer beta subunit, putative; n=1;
Theileria parva|Rep: Coatomer beta subunit, putative -
Theileria parva
Length = 923
Score = 89.4 bits (212), Expect = 1e-16
Identities = 47/137 (34%), Positives = 72/137 (52%)
Frame = +3
Query: 174 LKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIV 353
+K +LE KK +A++ + + L G + L M IIRF +P DH +K+L+ +F++
Sbjct: 27 VKKNLENNSLSKKTKAMEDILLMHLRGMDVSSLFMDIIRFAVPSTDHRMKRLVYLFFQTF 86
Query: 354 PKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACLE 533
DG E+ILVC+ DL PNE++RGS +P+I + +E
Sbjct: 87 NMCKKDGTPRDEVILVCNGLRNDLCSPNEYVRGSVLRLLSNLTIFNIIQPLIPSIISNVE 146
Query: 534 HRHSYVRRNAVLAIXTI 584
HR YV RNA+L + I
Sbjct: 147 HREPYVYRNALLCLTNI 163
>UniRef50_Q1EQ39 Cluster: Beta1-COP; n=1; Entamoeba histolytica|Rep:
Beta1-COP - Entamoeba histolytica
Length = 843
Score = 79.0 bits (186), Expect = 2e-13
Identities = 44/137 (32%), Positives = 69/137 (50%)
Frame = +3
Query: 180 LDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIVPK 359
L+L + D K EAL++ I L GE+ +LM +I + LP DH +K+L L++ + +
Sbjct: 20 LNLLQKDDISKSEALQQLISAELDGEQHTDMLMNVISYALPSTDHTVKRLFLMYLSCIKR 79
Query: 360 TSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACLEHR 539
GKLL E++LV ++ DL +PNE+IR T A+ + +
Sbjct: 80 VDEQGKLLSELVLVINSLQNDLNYPNEYIRALTLKFILTISEKELIQPLTHAVINNINSK 139
Query: 540 HSYVRRNAVLAIXTIYR 590
VR++ AI IYR
Sbjct: 140 SPLVRKHCFSAICHIYR 156
>UniRef50_Q4UHM1 Cluster: Coatamer, beta subunit, putative; n=1;
Theileria annulata|Rep: Coatamer, beta subunit, putative
- Theileria annulata
Length = 992
Score = 77.8 bits (183), Expect = 4e-13
Identities = 40/108 (37%), Positives = 56/108 (51%)
Frame = +3
Query: 261 IPGLLMIIIRFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNE 440
+ L M IIRF LP DH IK+L+ +F++ DG E+ILVC+ DL PNE
Sbjct: 3 VSSLFMDIIRFALPNNDHRIKRLVYLFFQTFNMCKHDGTPRDEVILVCNGLRNDLCSPNE 62
Query: 441 FIRGSTXXXXXXXXXXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTI 584
++RGS +P+I +EH+ YV RNA+L + I
Sbjct: 63 YVRGSVLRLLSNLTIFNIIQPLIPSIIINIEHKEPYVYRNALLCLTNI 110
>UniRef50_Q8SRB1 Cluster: COATOMER COMPLEX BETA SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: COATOMER COMPLEX BETA
SUBUNIT - Encephalitozoon cuniculi
Length = 818
Score = 67.7 bits (158), Expect = 4e-10
Identities = 45/166 (27%), Positives = 74/166 (44%)
Frame = +3
Query: 186 LEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIVPKTS 365
L + KIE +K+ I + GE L I + L ++ + +K+L + E++PK
Sbjct: 22 LRSSSEQDKIEGMKQMIAQMSQGEDFSSLTHKITKETLVVRSNELKRLFYYYLELLPKAR 81
Query: 366 PDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACLEHRHS 545
+ +EM+L+ + KDL+HPNE++RG I+ H ++
Sbjct: 82 GT-QSFEEMLLLSNQVRKDLEHPNEYVRGFVMRFVSTLDDQELVGNFYKLIKDNFNHPNT 140
Query: 546 YVRRNAVLAIXTIYRTLXVPPXS*XPRSXYHTXLETEPXXSCQRNA 683
YVRRNA + I+ L + P YH L + +C R A
Sbjct: 141 YVRRNAYFCLGEIF--LKMDMYKEVPDLLYHALLR-DLDPNCLREA 183
>UniRef50_A2FM03 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 673
Score = 66.9 bits (156), Expect = 7e-10
Identities = 41/155 (26%), Positives = 72/155 (46%)
Frame = +3
Query: 132 INFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQD 311
+N+ + +P + K + + K+ EAL++ + + + P LLM II++ D
Sbjct: 8 VNYQPEKQPKWDDLRKQLTNRNEPTKQAEALEQIVLLSFTESVPPHLLMPIIQYTATTMD 67
Query: 312 HMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXX 491
H + KLL +F E + G++ E IL+ DA K L PNE++RG+
Sbjct: 68 HRVIKLLFLFLENIEIRDARGEMRPEFILINDAIRKFLLSPNEYVRGAAIRFLYKINDHD 127
Query: 492 XXXXXMPAIRACLEHRHSYVRRNAVLAIXTIYRTL 596
+ A+ + L+H YVR A + + R +
Sbjct: 128 ILQQLLSAVISNLDHSDEYVRWYAAHLVARLVRDI 162
>UniRef50_Q6E6I0 Cluster: Coatomer complex beta subunit; n=1;
Antonospora locustae|Rep: Coatomer complex beta subunit
- Antonospora locustae (Nosema locustae)
Length = 807
Score = 65.7 bits (153), Expect = 2e-09
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = +3
Query: 186 LEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFV-LPLQDHMIKKLLLIFWEIVPKT 362
+E D + +++ I + G + I+R V L + +KKL F E PK
Sbjct: 20 VESRDEQNICTGIEQVIVQQIDGTSYVDVTHSIVRAVSLNAKSKALKKLFFYFIETFPKL 79
Query: 363 SPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACLEHRH 542
DG L+QE ++ C+ + L+HPNEF+RG ++ L H
Sbjct: 80 DADGNLVQEALVFCNFLRQQLEHPNEFVRGRAIGLLAKLDSLEMVELLYKPLKDNLYHFS 139
Query: 543 SYVRRNAVLAIXTIY 587
SYVRRN A+ +Y
Sbjct: 140 SYVRRNVYAALGAVY 154
>UniRef50_Q7R211 Cluster: GLP_163_4671_7817; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_163_4671_7817 - Giardia lamblia ATCC
50803
Length = 1048
Score = 57.2 bits (132), Expect = 6e-07
Identities = 38/131 (29%), Positives = 61/131 (46%)
Frame = +3
Query: 192 KGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIVPKTSPD 371
+ D K+ EAL+ I + + + I L++ +I+ DH +KKLL IFW +V +
Sbjct: 25 RSDPKEMCEALQTAIQLASNKQSIDHLVLPVIKHASTSTDHRLKKLLHIFWPLV-ECYHG 83
Query: 372 GKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACLEHRHSYV 551
G+L +IL+ ++ DL+ PNE I S + + L H V
Sbjct: 84 GQLKSHIILMSNSILHDLKSPNEMILCSALRCILHLQVIEVISNIITGVPPLLSHPDHRV 143
Query: 552 RRNAVLAIXTI 584
R AV AI ++
Sbjct: 144 RCAAVAAIHSV 154
>UniRef50_Q6Y0X8 Cluster: Coatomer-like protein beta subunit; n=1;
Spironucleus barkhanus|Rep: Coatomer-like protein beta
subunit - Spironucleus barkhanus
Length = 326
Score = 52.4 bits (120), Expect = 2e-05
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +3
Query: 213 IEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEM 392
I+ +K + S + +I+ V P Q+ ++K+L+ +FW +V G L
Sbjct: 7 IDTVKSILQSAFSDPPPESYIFPLIKNVSPSQNKLLKRLIHLFWPLVQFYDGHGALKPYT 66
Query: 393 ILVCDAYXKDLQHPNEFIR 449
IL+C++ DL+HPNEFI+
Sbjct: 67 ILICNSILSDLKHPNEFIQ 85
>UniRef50_A2ER45 Cluster: Adaptin N terminal region family protein;
n=1; Trichomonas vaginalis G3|Rep: Adaptin N terminal
region family protein - Trichomonas vaginalis G3
Length = 800
Score = 50.8 bits (116), Expect = 5e-05
Identities = 35/143 (24%), Positives = 66/143 (46%)
Frame = +3
Query: 168 MQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWE 347
++L+ L+ DTK + EA K+ + ++ SGE L ++R + D +K+L+ I+
Sbjct: 16 LELREKLDGNDTKLRKEAAKRVVSLMRSGEDCSILFSSMLRSI-NTDDLELKRLVYIY-I 73
Query: 348 IVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRAC 527
+ TS + +E I+ A KD +H N +R + ++
Sbjct: 74 LTYSTSEE----EESIMAVSAMLKDSEHYNPLVRSLAIRSMTKIKIEAFAENIIAQVKKS 129
Query: 528 LEHRHSYVRRNAVLAIXTIYRTL 596
L+ + YVR+ A L + I+ T+
Sbjct: 130 LQDKDPYVRKTAALGVAKIFSTI 152
>UniRef50_A5K978 Cluster: Adapter-related protein complex 1 beta 1
subunit, putative; n=8; Plasmodium|Rep: Adapter-related
protein complex 1 beta 1 subunit, putative - Plasmodium
vivax
Length = 930
Score = 50.0 bits (114), Expect = 9e-05
Identities = 35/139 (25%), Positives = 59/139 (42%)
Frame = +3
Query: 171 QLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEI 350
+LK +L +KK EA+KK I + G+ + L ++ + + +KKL+ ++
Sbjct: 17 ELKEELHSSHKEKKKEAIKKIIAAMTVGKDVSTLFSDVVN-CMQTSNIELKKLVYLYVIN 75
Query: 351 VPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACL 530
K P+ IL + + KD PN IR + +R CL
Sbjct: 76 YAKVQPE-----LAILAVNTFRKDSSDPNPLIRALAIRTMGCIRLEQITEYLIEPLRRCL 130
Query: 531 EHRHSYVRRNAVLAIXTIY 587
+ YVR+ AV+ I +Y
Sbjct: 131 KDEDPYVRKTAVICIAKLY 149
>UniRef50_Q00YY7 Cluster: Vesicle coat complex AP-1/AP-2/AP-4, beta
subunit; n=2; Ostreococcus|Rep: Vesicle coat complex
AP-1/AP-2/AP-4, beta subunit - Ostreococcus tauri
Length = 784
Score = 49.2 bits (112), Expect = 2e-04
Identities = 35/142 (24%), Positives = 59/142 (41%)
Frame = +3
Query: 165 EMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFW 344
+ +L L TK K++ALKK I ++ G + ++ ++ + +K L+ +F
Sbjct: 22 QRELDTKLRSSSTKDKLDALKKLIALMAMGRDVSVFFPSVVVNIVS-ESFEVKVLVYMFL 80
Query: 345 EIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRA 524
P+ E +L +++ KDL HPN +R + A R
Sbjct: 81 VRTADQKPE-----EALLSINSFQKDLAHPNPRVRALALRVMSSIRIQVIVPVVILAARK 135
Query: 525 CLEHRHSYVRRNAVLAIXTIYR 590
C YVR+ A A+ IYR
Sbjct: 136 CAVDPSPYVRKAAAHAVPKIYR 157
>UniRef50_Q86X54 Cluster: AP1B1 protein; n=9; Eumetazoa|Rep: AP1B1
protein - Homo sapiens (Human)
Length = 919
Score = 48.8 bits (111), Expect = 2e-04
Identities = 32/139 (23%), Positives = 59/139 (42%)
Frame = +3
Query: 171 QLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEI 350
+LK +L +KK EA+KK I + G+ + L ++ + + +KKL+ ++
Sbjct: 17 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYLMN 75
Query: 351 VPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACL 530
K+ PD I+ + + KD + PN IR +R CL
Sbjct: 76 YAKSQPD-----MAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCL 130
Query: 531 EHRHSYVRRNAVLAIXTIY 587
+ YVR+ A + + ++
Sbjct: 131 KDEDPYVRKTAAVCVAKLH 149
>UniRef50_Q10567 Cluster: AP-1 complex subunit beta-1; n=112;
Eukaryota|Rep: AP-1 complex subunit beta-1 - Homo
sapiens (Human)
Length = 949
Score = 48.8 bits (111), Expect = 2e-04
Identities = 32/139 (23%), Positives = 59/139 (42%)
Frame = +3
Query: 171 QLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEI 350
+LK +L +KK EA+KK I + G+ + L ++ + + +KKL+ ++
Sbjct: 17 ELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYLMN 75
Query: 351 VPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACL 530
K+ PD I+ + + KD + PN IR +R CL
Sbjct: 76 YAKSQPD-----MAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCL 130
Query: 531 EHRHSYVRRNAVLAIXTIY 587
+ YVR+ A + + ++
Sbjct: 131 KDEDPYVRKTAAVCVAKLH 149
>UniRef50_O00203 Cluster: AP-3 complex subunit beta-1; n=46;
Eumetazoa|Rep: AP-3 complex subunit beta-1 - Homo
sapiens (Human)
Length = 1094
Score = 48.4 bits (110), Expect = 3e-04
Identities = 41/150 (27%), Positives = 66/150 (44%)
Frame = +3
Query: 138 FPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHM 317
F +DL+ NE LK LE K++A+K+ +G+I G+ L +++ V ++
Sbjct: 37 FSSDLKK-NE-DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVAS-KNIE 93
Query: 318 IKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXX 497
IKKL+ ++ + D LL + + L+ PN+ IR S
Sbjct: 94 IKKLVYVYLVRYAEEQQDLALLS-----ISTFQRALKDPNQLIRASALRVLSSIRVPIIV 148
Query: 498 XXXMPAIRACLEHRHSYVRRNAVLAIXTIY 587
M AI+ YVR+NA AI +Y
Sbjct: 149 PIMMLAIKEASADLSPYVRKNAAHAIQKLY 178
>UniRef50_A0DHA8 Cluster: Chromosome undetermined scaffold_50, whole
genome shotgun sequence; n=4; Alveolata|Rep: Chromosome
undetermined scaffold_50, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 670
Score = 46.4 bits (105), Expect = 0.001
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Frame = +3
Query: 171 QLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEI 350
+L DL + +KK EA+KK I + G+ + L +I+ L QD +KKL+ ++
Sbjct: 15 ELYADLNDLNFEKKKEAVKKVIAYMTVGKDVSQLFQSVIK-CLEFQDIEMKKLIYLYIVN 73
Query: 351 VPKTSPDGKLLQEMILVCDAYXKDLQHP-NEFIRGSTXXXXXXXXXXXXXXXXMPAIRAC 527
+ PD + I+V + KD++ N +R + ++ C
Sbjct: 74 YSRQKPD-----DAIMVIQNFRKDVRKSENPLVRALAIRTFGCLRVPKLNEYLIEPLKDC 128
Query: 528 LEHRHSYVRRNAVLAIXTIY 587
+ YVR+ AVL + ++
Sbjct: 129 ISDDDPYVRKTAVLCVPKVF 148
>UniRef50_A2DAM8 Cluster: Adaptin N terminal region family protein;
n=5; Trichomonas vaginalis G3|Rep: Adaptin N terminal
region family protein - Trichomonas vaginalis G3
Length = 813
Score = 45.2 bits (102), Expect = 0.002
Identities = 31/141 (21%), Positives = 59/141 (41%)
Frame = +3
Query: 174 LKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIV 353
L+ L K++ +A K I ++ +GE + L ++R V D +KKL+ ++
Sbjct: 19 LQNKLSSNYPKERKDAAKNVIALMRAGENVQELFSDMLRCV-KTDDLELKKLVYLYLVNY 77
Query: 354 PKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACLE 533
T P+ + I+ + + +D +H N IR + ++ CL+
Sbjct: 78 STTEPE-----QAIMAVNTFVQDSEHDNPLIRALAVRTMCRINLESVAEHMIQPLKKCLK 132
Query: 534 HRHSYVRRNAVLAIXTIYRTL 596
YVR+ A + +Y L
Sbjct: 133 DADPYVRKTAAFGVSKLYDVL 153
>UniRef50_Q9M650 Cluster: Beta-adaptin-like protein B; n=16;
Eukaryota|Rep: Beta-adaptin-like protein B - Arabidopsis
thaliana (Mouse-ear cress)
Length = 894
Score = 44.4 bits (100), Expect = 0.004
Identities = 31/139 (22%), Positives = 59/139 (42%)
Frame = +3
Query: 171 QLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEI 350
+LK +L K+ +A+KK I + G+ + L ++ + ++ +KKL+ ++
Sbjct: 19 ELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVN-CMQTENLELKKLVYLYLIN 77
Query: 351 VPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACL 530
K+ PD IL + + KD Q PN IR ++ CL
Sbjct: 78 YAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQKCL 132
Query: 531 EHRHSYVRRNAVLAIXTIY 587
+ YVR+ A + + ++
Sbjct: 133 KDDDPYVRKTAAICVAKLF 151
>UniRef50_O45718 Cluster: Putative uncharacterized protein apb-3;
n=3; Caenorhabditis|Rep: Putative uncharacterized
protein apb-3 - Caenorhabditis elegans
Length = 906
Score = 44.4 bits (100), Expect = 0.004
Identities = 33/138 (23%), Positives = 60/138 (43%)
Frame = +3
Query: 174 LKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIV 353
LK L+ K++A+K+ I +I G+ + L +++ V ++ +KKL+ ++
Sbjct: 19 LKAMLDSNKDNLKVDAMKRIINLIAKGKDVSELFAAVVKNVAA-KNVELKKLVFVYLVRY 77
Query: 354 PKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACLE 533
+ D LL + + L+ PN+ IRGS + AI+ +
Sbjct: 78 AEEQQDLALLS-----ISTFQRALKDPNQLIRGSALRVLTSIRVPMVAPIMLLAIKDAVR 132
Query: 534 HRHSYVRRNAVLAIXTIY 587
YVR+ A AI +Y
Sbjct: 133 DMSPYVRKVAAHAIPKLY 150
>UniRef50_Q22WH8 Cluster: Adaptin N terminal region family protein;
n=1; Tetrahymena thermophila SB210|Rep: Adaptin N
terminal region family protein - Tetrahymena thermophila
SB210
Length = 1010
Score = 44.0 bits (99), Expect = 0.006
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Frame = +3
Query: 174 LKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIV 353
L+ +L + + K+ A+KK I + G+ + L +++ L D +KKL+ ++
Sbjct: 16 LEQELNSDEFETKLYAVKKIIANMTVGKDVSPLFQSVLK-CLQYPDIQLKKLVYLYIINY 74
Query: 354 PKTSPDGKLLQEMILVCDAYXKDLQHP-NEFIRGSTXXXXXXXXXXXXXXXXMPAIRACL 530
+ PD + I+V + + KD+++ N +R + ++ CL
Sbjct: 75 SRDKPD-----DSIMVVNLFRKDMENKGNPLLRALAVRTIGCLRVHKLNEYLVSPLKNCL 129
Query: 531 EHRHSYVRRNAVLAIXTIY 587
E YVR+ A L + +Y
Sbjct: 130 EDVEPYVRKTAALCVPKVY 148
>UniRef50_Q23Q76 Cluster: Adaptin N terminal region family protein;
n=1; Tetrahymena thermophila SB210|Rep: Adaptin N
terminal region family protein - Tetrahymena thermophila
SB210
Length = 1273
Score = 43.6 bits (98), Expect = 0.008
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Frame = +3
Query: 162 NEMQ-LKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLI 338
NE+Q L+ DL + K EA++K I + G+ + L ++R ++ ++ +KKL+ +
Sbjct: 161 NEIQELQDDLINNNENIKKEAVRKIIDAMTRGKDVSMLFPHVLRNMMT-KNMELKKLIYL 219
Query: 339 FWEIVPKTSPDGKLLQEMILVCDAYXKDLQHP-NEFIRGSTXXXXXXXXXXXXXXXXMPA 515
+ KT PD +IL +++ D P N +R + A
Sbjct: 220 YIINYAKTKPD-----LVILAINSFKSDASDPSNPMLRSLAVRTMGCIRVKEIIEYLLDA 274
Query: 516 IRACLEHRHSYVRRNAVLAIXTIYRT 593
++ ++ + YVR+ A + I IY T
Sbjct: 275 LKKAVKDENPYVRKTAAVCIAKIYET 300
>UniRef50_A0DRP1 Cluster: Chromosome undetermined scaffold_60, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_60,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 776
Score = 42.7 bits (96), Expect = 0.013
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 2/144 (1%)
Frame = +3
Query: 162 NEMQL--KLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLL 335
NE+++ K L + D KKK E +KK I + SG + + + D + KK++
Sbjct: 30 NELKILVKNTLSEKDDKKKREVVKKVIAYMTSGIDVSKIFPEMC-MASYTNDMVQKKMIY 88
Query: 336 IFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPA 515
++ + + D + + KD +H + IRG MPA
Sbjct: 89 LYLTTYAEQNKD-----LAFMAISTFQKDCKHSDPKIRGFALRNLCSLRFSGAIEYLMPA 143
Query: 516 IRACLEHRHSYVRRNAVLAIXTIY 587
IR L YVR+ A++ +Y
Sbjct: 144 IRESLSDIDPYVRKTAIMGCVKVY 167
>UniRef50_A2DXB3 Cluster: Adaptin N terminal region family protein;
n=1; Trichomonas vaginalis G3|Rep: Adaptin N terminal
region family protein - Trichomonas vaginalis G3
Length = 800
Score = 41.5 bits (93), Expect = 0.030
Identities = 30/144 (20%), Positives = 65/144 (45%)
Frame = +3
Query: 165 EMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFW 344
+++ +LD G+T+KK A K+ + ++ +GE + L ++R V D +K+L +++
Sbjct: 15 DLRNQLDSNDGETRKK--AAKRVVALMRAGENVGNLFSSMLRCV-KTDDLELKRLTYLYF 71
Query: 345 EIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRA 524
+ + E I+ + + +D + N +R + I+
Sbjct: 72 VTYAEEQSE-----EAIMAVNTFIQDSEDRNPLVRALAVRTMSRIRIDTIAEHMIIPIKQ 126
Query: 525 CLEHRHSYVRRNAVLAIXTIYRTL 596
L + +VR+ AVLAI ++ +
Sbjct: 127 RLSDKDPFVRKTAVLAIAKLFEII 150
>UniRef50_Q5KDA3 Cluster: Clathrin binding protein, putative; n=2;
Filobasidiella neoformans|Rep: Clathrin binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 755
Score = 41.1 bits (92), Expect = 0.040
Identities = 32/141 (22%), Positives = 60/141 (42%)
Frame = +3
Query: 165 EMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFW 344
E++ +L+ E D K+ +A+K+ I G+ GL +++ + D KKL+ ++
Sbjct: 13 ELRQQLNSEYRD--KRADAIKRVIANHTIGKDCSGLFPDVVKN-MQTDDLEQKKLVYLYL 69
Query: 345 EIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRA 524
KT P+ +IL + + KD PN +R +
Sbjct: 70 MNYAKTQPE-----LVILAVNTFVKDTADPNPLVRALAIRTMSILRAEKILDYLASPLSR 124
Query: 525 CLEHRHSYVRRNAVLAIXTIY 587
CL+ + YVR+ A L + ++
Sbjct: 125 CLKDENPYVRKTAALCVAKVF 145
>UniRef50_Q23C04 Cluster: Adaptin N terminal region family protein;
n=1; Tetrahymena thermophila SB210|Rep: Adaptin N
terminal region family protein - Tetrahymena thermophila
SB210
Length = 833
Score = 36.3 bits (80), Expect = 1.1
Identities = 29/138 (21%), Positives = 57/138 (41%)
Frame = +3
Query: 174 LKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIV 353
LK + D KKK + +KK I + G + L ++ V D + KK++ ++
Sbjct: 63 LKKHMFDRDEKKKRDLVKKVIAYMTLGIDVSKLFDQMV-IVSQTADLVQKKMIYLYLTNY 121
Query: 354 PKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACLE 533
+ +PD L+ + + KD + + ++G +PAI L+
Sbjct: 122 AEQNPDTALM-----AINTFIKDCDNKDPKVKGLALRSLCSLRFSGSFEYLIPAINKALQ 176
Query: 534 HRHSYVRRNAVLAIXTIY 587
YVR+ A++ ++
Sbjct: 177 DIDPYVRKTAIMGCVKVF 194
>UniRef50_Q1EQ25 Cluster: Beta subunit isoform c; n=1; Entamoeba
histolytica|Rep: Beta subunit isoform c - Entamoeba
histolytica
Length = 678
Score = 36.3 bits (80), Expect = 1.1
Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Frame = +3
Query: 135 NFPTDLEPCNE--MQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQ 308
N+ TD++ + +L+ L+ + +++ EAL+K + G+ + M +++ ++
Sbjct: 36 NYKTDIKKMKDELQELREMLQSKEIEEQREALRKIVLATAEGKDCSFMFMDVLK-IIQTN 94
Query: 309 DHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXX 488
D +K+++ ++ I S D Q+ IL ++ D +H + +RG
Sbjct: 95 DVSLKQMIYLY--ISAYASIDE---QQAILGVNSLIIDSKHHDAHVRGLALRTMGNIRLQ 149
Query: 489 XXXXXXMPAIRACLEHRHSYVRRNAVLAI 575
+ + L+ YVRRNAVL +
Sbjct: 150 MTAEYFVQPLLNGLDDNDPYVRRNAVLGL 178
>UniRef50_Q7S6M1 Cluster: Putative uncharacterized protein
NCU04814.1; n=5; Pezizomycotina|Rep: Putative
uncharacterized protein NCU04814.1 - Neurospora crassa
Length = 785
Score = 36.3 bits (80), Expect = 1.1
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +3
Query: 231 TIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMI 395
T+ I++ GE IP L + R+ LP+ +M K +LL+ + P + P KLL +++
Sbjct: 162 TVLIVIFGEVIPQSLCV--RYGLPIGGYMAKPVLLLMYLTAPVSYPIAKLLDKLL 214
>UniRef50_Q9LMQ1 Cluster: F7H2.17 protein; n=2; Arabidopsis
thaliana|Rep: F7H2.17 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1006
Score = 35.1 bits (77), Expect = 2.6
Identities = 25/90 (27%), Positives = 28/90 (31%), Gaps = 2/90 (2%)
Frame = +3
Query: 657 PXXSCQRNAXXLXLPXTTXXXRXLXXPXFPSXXXXXXXPPXPXXXLQXAHXPXXXLXXXX 836
P C +N LP L P PS PP P + A P
Sbjct: 326 PIDPCPQNPF---LPPPATLPPPLPLPPPPSLPVTPCSPPPPPIIVNGAPPPPCVTCVQV 382
Query: 837 QPRAXXXXXXSPXXP--LPXPXXPPPXPXP 920
P SP P +P P PPP P P
Sbjct: 383 SPPPPTPVPCSPPPPPPIPVPCPPPPSPPP 412
>UniRef50_Q2H247 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 734
Score = 35.1 bits (77), Expect = 2.6
Identities = 35/145 (24%), Positives = 58/145 (40%)
Frame = +3
Query: 156 PCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLL 335
P + Q+K L+ + ++ ++ L++ I ++ G+K L +++ V + IKKL+
Sbjct: 34 PLDRTQVKKLLDSRNEREVLDGLRRVISMMYRGQKTLLLFSSVVKNVAS-PNLEIKKLVY 92
Query: 336 IFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPA 515
I+ + PD LL + K L N +R A
Sbjct: 93 IYLIHHAEQEPDLALLS-----INTIQKSLSDTNPQVRALALRTMSGIRVPVISQIVSLA 147
Query: 516 IRACLEHRHSYVRRNAVLAIXTIYR 590
IR YVRR A LA+ YR
Sbjct: 148 IRKGAGDMSPYVRRAAALAVPKCYR 172
>UniRef50_Q7QZ72 Cluster: GLP_22_12403_9005; n=2; Giardia
intestinalis|Rep: GLP_22_12403_9005 - Giardia lamblia
ATCC 50803
Length = 1132
Score = 34.7 bits (76), Expect = 3.5
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 4/144 (2%)
Frame = +3
Query: 171 QLKLDLEKGDTKKKIEALKKTIGIILS----GEKIPGLLMIIIRFVLPLQDHMIKKLLLI 338
+L+ EK T K+E ++ +G ILS G + + ++ RF +D +KK++ +
Sbjct: 15 ELEFWSEKLQTSNKVEDHREVVGQILSALSLGRDVSSIFPLVCRFA-ATKDIKLKKVVYL 73
Query: 339 FWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAI 518
F K +PD + +L D+ ++ IR AI
Sbjct: 74 FVLNYHKMNPDTPVQVGSVLDMDSQDRE----QAVIRALAIRTMGNLCTQETLQVFTNAI 129
Query: 519 RACLEHRHSYVRRNAVLAIXTIYR 590
L +VR+ A A+ IYR
Sbjct: 130 GRALGDADPFVRKTAATAVAKIYR 153
>UniRef50_Q86AM8 Cluster: Similar to Homo sapiens (Human).
Adapter-related protein complex 3 beta 2 subunit; n=2;
Dictyostelium discoideum|Rep: Similar to Homo sapiens
(Human). Adapter-related protein complex 3 beta 2
subunit - Dictyostelium discoideum (Slime mold)
Length = 1108
Score = 34.3 bits (75), Expect = 4.6
Identities = 28/140 (20%), Positives = 60/140 (42%)
Frame = +3
Query: 171 QLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEI 350
++K L+ K+E++KK I ++ G + +++ V+ +++ IKKL+ ++
Sbjct: 25 EIKKHLDSPSDADKLESMKKLIAMLSKGRDVSEAFPQVVKNVI-VKNLEIKKLVYMYLVH 83
Query: 351 VPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACL 530
++ D LL + K L ++ IR S + AI +
Sbjct: 84 YAESQNDSALLS-----INTIQKSLNDQSQVIRASALRVMSSIRVIDIIEVIILAIEKSV 138
Query: 531 EHRHSYVRRNAVLAIXTIYR 590
+ +VR+ A AI +++
Sbjct: 139 KDTSPFVRKAAAFAIAKVHK 158
>UniRef50_Q7Z451 Cluster: Beta adaptin subunit; n=14; Eukaryota|Rep:
Beta adaptin subunit - Homo sapiens (Human)
Length = 880
Score = 33.9 bits (74), Expect = 6.1
Identities = 20/90 (22%), Positives = 37/90 (41%)
Frame = +3
Query: 318 IKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXX 497
+KKL+ ++ K+ PD I+ +++ KD + PN IR
Sbjct: 8 LKKLVYLYLMNYAKSQPD-----MAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKIT 62
Query: 498 XXXMPAIRACLEHRHSYVRRNAVLAIXTIY 587
+R CL+ YVR+ A + + ++
Sbjct: 63 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLH 92
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,569,569
Number of Sequences: 1657284
Number of extensions: 13460091
Number of successful extensions: 43141
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 32048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39241
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 87365783978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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