Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_D23
         (947 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145656-1|AAD38631.1|  964|Drosophila melanogaster BcDNA.GH0931...   241   7e-64
AE014298-2708|AAF48830.2|  964|Drosophila melanogaster CG6223-PA...   241   7e-64
L31852-1|AAA21090.1|  962|Drosophila melanogaster bcop protein.       240   2e-63
X75910-1|CAA53509.1|  921|Drosophila melanogaster beta-adaptin D...    47   3e-05
BT016054-1|AAV36939.1|  921|Drosophila melanogaster LP17054p pro...    47   3e-05
AE014298-2924|AAF49013.1|  921|Drosophila melanogaster CG12532-P...    47   3e-05

>AF145656-1|AAD38631.1|  964|Drosophila melanogaster BcDNA.GH09317
           protein.
          Length = 964

 Score =  241 bits (591), Expect = 7e-64
 Identities = 124/196 (63%), Positives = 141/196 (71%), Gaps = 2/196 (1%)
 Frame = +3

Query: 117 PCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFV 296
           PCYT+IN P DLE  NEMQLK DLEKGDT  KIE LK+ I ++L+GE+ PGL+M IIRFV
Sbjct: 6   PCYTIINSP-DLEVTNEMQLKRDLEKGDTNVKIETLKRVIKLLLNGERYPGLIMTIIRFV 64

Query: 297 LPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXX 476
           LP+Q+H IKKLLLIFWEIVPKTS DGKLLQEMILVCDAY KDLQHPNEF+RGST      
Sbjct: 65  LPVQNHTIKKLLLIFWEIVPKTSADGKLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCK 124

Query: 477 XXXXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTIYRTL--XVPPXS*XPRSXYHTXLE 650
                     MPAIRACL+HRHSYVRRNAVLAI TIY+     VP           + L+
Sbjct: 125 LKEPELLEPLMPAIRACLDHRHSYVRRNAVLAIFTIYKNFDWLVPDGP----ELIASFLD 180

Query: 651 TEPXXSCQRNAXXLXL 698
           T+   SC+RNA  + L
Sbjct: 181 TQQDMSCKRNAFLMLL 196


>AE014298-2708|AAF48830.2|  964|Drosophila melanogaster CG6223-PA
           protein.
          Length = 964

 Score =  241 bits (591), Expect = 7e-64
 Identities = 124/196 (63%), Positives = 141/196 (71%), Gaps = 2/196 (1%)
 Frame = +3

Query: 117 PCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFV 296
           PCYT+IN P DLE  NEMQLK DLEKGDT  KIE LK+ I ++L+GE+ PGL+M IIRFV
Sbjct: 6   PCYTIINSP-DLEVTNEMQLKRDLEKGDTNVKIETLKRVIKLLLNGERYPGLIMTIIRFV 64

Query: 297 LPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXX 476
           LP+Q+H IKKLLLIFWEIVPKTS DGKLLQEMILVCDAY KDLQHPNEF+RGST      
Sbjct: 65  LPVQNHTIKKLLLIFWEIVPKTSADGKLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCK 124

Query: 477 XXXXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTIYRTL--XVPPXS*XPRSXYHTXLE 650
                     MPAIRACL+HRHSYVRRNAVLAI TIY+     VP           + L+
Sbjct: 125 LKEPELLEPLMPAIRACLDHRHSYVRRNAVLAIFTIYKNFDWLVPDGP----ELIASFLD 180

Query: 651 TEPXXSCQRNAXXLXL 698
           T+   SC+RNA  + L
Sbjct: 181 TQQDMSCKRNAFLMLL 196


>L31852-1|AAA21090.1|  962|Drosophila melanogaster bcop protein.
          Length = 962

 Score =  240 bits (588), Expect = 2e-63
 Identities = 122/195 (62%), Positives = 141/195 (72%), Gaps = 1/195 (0%)
 Frame = +3

Query: 117 PCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFV 296
           PCYT+IN P DLE  NEMQLK DLEKGDT  KIE LK+ I ++L+GE+ PGL+M IIRFV
Sbjct: 6   PCYTIINSP-DLEVTNEMQLKRDLEKGDTNVKIETLKRVIKLLLNGERYPGLIMTIIRFV 64

Query: 297 LPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXX 476
           LP+++H IKKLLLIFWEIVPKTS DGKLLQEMILVCDAY KDLQHPNEF+RGST      
Sbjct: 65  LPVENHTIKKLLLIFWEIVPKTSADGKLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCK 124

Query: 477 XXXXXXXXXXMPAIRACLEHRHSYVRRNAVLAIXTIYRTL-XVPPXS*XPRSXYHTXLET 653
                     MPAIRACL+HRHSYVRRNAVLAI TIY+    + P          + L+T
Sbjct: 125 LKEPELLEPLMPAIRACLDHRHSYVRRNAVLAIFTIYKNFDWLAPDG---PELIASFLDT 181

Query: 654 EPXXSCQRNAXXLXL 698
           +   SC+RNA  + L
Sbjct: 182 QQDMSCKRNAFLMLL 196


>X75910-1|CAA53509.1|  921|Drosophila melanogaster beta-adaptin
           Drosophila 1 protein.
          Length = 921

 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 32/139 (23%), Positives = 58/139 (41%)
 Frame = +3

Query: 171 QLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEI 350
           +LK +L     +KK EA+KK I  +  G+ +  L   ++   +   +  +KKL+ ++   
Sbjct: 17  ELKSELNNDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYLMN 75

Query: 351 VPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACL 530
             K+ PD       I+  + + KD +  N  IR                      +R CL
Sbjct: 76  YAKSQPD-----MAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCL 130

Query: 531 EHRHSYVRRNAVLAIXTIY 587
           +    YVR+ A + +  +Y
Sbjct: 131 KDEDPYVRKTAAVCVAKLY 149


>BT016054-1|AAV36939.1|  921|Drosophila melanogaster LP17054p
           protein.
          Length = 921

 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 32/139 (23%), Positives = 58/139 (41%)
 Frame = +3

Query: 171 QLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEI 350
           +LK +L     +KK EA+KK I  +  G+ +  L   ++   +   +  +KKL+ ++   
Sbjct: 17  ELKSELNNDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYLMN 75

Query: 351 VPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACL 530
             K+ PD       I+  + + KD +  N  IR                      +R CL
Sbjct: 76  YAKSQPD-----MAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCL 130

Query: 531 EHRHSYVRRNAVLAIXTIY 587
           +    YVR+ A + +  +Y
Sbjct: 131 KDEDPYVRKTAAVCVAKLY 149


>AE014298-2924|AAF49013.1|  921|Drosophila melanogaster CG12532-PA
           protein.
          Length = 921

 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 32/139 (23%), Positives = 58/139 (41%)
 Frame = +3

Query: 171 QLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEI 350
           +LK +L     +KK EA+KK I  +  G+ +  L   ++   +   +  +KKL+ ++   
Sbjct: 17  ELKSELNNDKKEKKKEAVKKVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYLMN 75

Query: 351 VPKTSPDGKLLQEMILVCDAYXKDLQHPNEFIRGSTXXXXXXXXXXXXXXXXMPAIRACL 530
             K+ PD       I+  + + KD +  N  IR                      +R CL
Sbjct: 76  YAKSQPD-----MAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCL 130

Query: 531 EHRHSYVRRNAVLAIXTIY 587
           +    YVR+ A + +  +Y
Sbjct: 131 KDEDPYVRKTAAVCVAKLY 149


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,738,281
Number of Sequences: 53049
Number of extensions: 662713
Number of successful extensions: 2057
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1818
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4710216690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)