Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_D22
         (983 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       28   0.11 
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   4.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   4.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   4.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   4.2  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   5.6  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   7.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   9.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   9.8  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 28.3 bits (60), Expect = 0.11
 Identities = 12/36 (33%), Positives = 12/36 (33%)
 Frame = +1

Query: 874 PXXHPXXHXXSPPPXPGHPXXPXAXXPPXAXPPPPP 981
           P   P  H     P  G P  P    PP   P  PP
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 22.2 bits (45), Expect = 7.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 739 PPPXXPPXPPP 771
           PPP  PP  PP
Sbjct: 46  PPPGGPPGAPP 56


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -2

Query: 175 SWSRRAFSKGRRGVTYVFENTDGTL 101
           S++  + S  +  +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -2

Query: 175 SWSRRAFSKGRRGVTYVFENTDGTL 101
           S++  + S  +  +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -2

Query: 175 SWSRRAFSKGRRGVTYVFENTDGTL 101
           S++  + S  +  +TYV++N +GTL
Sbjct: 252 SFAIESISYEQTAITYVWKNDEGTL 276


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -2

Query: 175 SWSRRAFSKGRRGVTYVFENTDGTL 101
           S++  + S  +  +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 952 PPXAXPPPPP 981
           PP   PPPPP
Sbjct: 338 PPKPAPPPPP 347



 Score = 22.2 bits (45), Expect = 7.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 739 PPPXXPPXPPP 771
           PP   PP PPP
Sbjct: 338 PPKPAPPPPPP 348


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 472 WHGWMDFARPALNTCVCRR 416
           W+ WM   R A+    CR+
Sbjct: 473 WNSWMPSIRGAIQQWTCRQ 491


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
 Frame = -1

Query: 767  GGXGGXXG-GGXGGXGG 720
            GG G   G GG GG GG
Sbjct: 1705 GGGGSLAGLGGLGGLGG 1721


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
 Frame = -1

Query: 767  GGXGGXXG-GGXGGXGG 720
            GG G   G GG GG GG
Sbjct: 1701 GGGGSLAGLGGLGGLGG 1717


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,314
Number of Sequences: 438
Number of extensions: 7854
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32532591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)