Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_D21
         (1015 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   1.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   2.5  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    23   5.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   5.8  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    23   5.8  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    23   5.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   7.7  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +3

Query: 351 TKDGKEIVKSYFPIQFRVIFXEQTVKLINKRDHHALKLIDQXXHNKIA 494
           T + K+I K   P + ++I     V ++   DH    L+D   +  IA
Sbjct: 124 TMENKDITKRPLPNESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSIA 171


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +2

Query: 941  PXPPPXPXXXPLXPPRXXPP 1000
            P P P P   P  P R  PP
Sbjct: 21   PGPQPSPHQSPQAPQRGSPP 40



 Score = 22.6 bits (46), Expect = 5.8
 Identities = 10/32 (31%), Positives = 10/32 (31%)
 Frame = +2

Query: 860 PXPXPXXXXXXXXPXXPPPXXXXXXPPPXPPP 955
           P P P        P    P      PPP  PP
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52



 Score = 22.6 bits (46), Expect = 5.8
 Identities = 9/26 (34%), Positives = 9/26 (34%)
 Frame = +1

Query: 895 PXXXPPPXXXPXXPPPXXPPXXXXXP 972
           P   PPP   P  PP   P      P
Sbjct: 42  PSQGPPPGGPPGAPPSQNPSQMMISP 67


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +3

Query: 231 AIAXCSEYLKEKKGEVIXEAVKRLIENGKRNTMDFAYQLWTKDGKEIVK 377
           A+A   +   +K+ EVI + +K L+EN K    D     +  D K  VK
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN-KPELWDSLANKYDPDKKYRVK 118


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
            protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 10/34 (29%), Positives = 11/34 (32%)
 Frame = +2

Query: 899  PXXPPPXXXXXXPPPXPPPXPXXXPLXPPRXXPP 1000
            P   PP      P P P P     P+      PP
Sbjct: 433  PILTPPSSNPVSPVPSPDPLDLAIPVRETLILPP 466


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +3

Query: 231 AIAXCSEYLKEKKGEVIXEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFP-IQFRVI 407
           A+A   +   +K+ EVI + +K L+EN          +LW      +   Y P  +FRV 
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVENKP--------ELW----DSLANKYDPDKKFRVK 118

Query: 408 FXEQTVKL 431
           F E+  KL
Sbjct: 119 FEEEAKKL 126


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +3

Query: 231 AIAXCSEYLKEKKGEVIXEAVKRLIENGKRNTMDFAYQLWTKDGKEIVK 377
           A+A   +   +K+ EVI + +K L+EN K    D     +  D K  VK
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN-KPELWDSLANKYDPDKKYRVK 118


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 557 KQQSLLQDHVXRGQTVPEAR*HERF 631
           + Q ++Q HV    T+PE +   RF
Sbjct: 386 RNQDVVQTHVLTIHTIPEVKVTPRF 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,286
Number of Sequences: 438
Number of extensions: 6879
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33741981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)