Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_D20
(920 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C) 194 5e-50
At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C) 194 5e-50
At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) simila... 191 5e-49
At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) simila... 191 5e-49
At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) simila... 191 5e-49
At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B) 189 2e-48
At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) simila... 107 1e-23
At5g38830.1 68418.m04697 tRNA synthetase class I (C) family prot... 30 2.5
At3g52860.1 68416.m05825 expressed protein 30 2.5
At3g18100.2 68416.m02302 myb family transcription factor (MYB4R1... 29 4.3
At3g18100.1 68416.m02301 myb family transcription factor (MYB4R1... 29 4.3
At4g31470.1 68417.m04471 pathogenesis-related protein, putative ... 29 5.7
>At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C)
Length = 247
Score = 194 bits (474), Expect = 5e-50
Identities = 99/218 (45%), Positives = 130/218 (59%)
Frame = +3
Query: 198 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLAR 377
VPESVLK + + +++ ++ IFKRAEQY KEY K+ + IRL R
Sbjct: 13 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLKR 72
Query: 378 QARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNML 557
+A+ +G +YV EAKL F+IRIRGIN + PK +K+LQL RLRQI NGVF+++NKATVNML
Sbjct: 73 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNML 132
Query: 558 RIAEPSIAWGYPNLKSVRELVYXRGFAKLSGPRIPITSNSXVEXXLHXPXXXXXXXXXXX 737
R EP + +GYPNLKSV+EL+Y RG+ KL+ RI +T NS V+ L
Sbjct: 133 RRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHE 192
Query: 738 XXXXXXKFKYPSXSLWPFXLXHPTGXXXPXXHSYVDXG 851
FK + LWPF L P G + YV+ G
Sbjct: 193 IMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGG 230
>At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C)
Length = 242
Score = 194 bits (474), Expect = 5e-50
Identities = 99/218 (45%), Positives = 130/218 (59%)
Frame = +3
Query: 198 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLAR 377
VPESVLK + + +++ ++ IFKRAEQY KEY K+ + IRL R
Sbjct: 8 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLKR 67
Query: 378 QARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNML 557
+A+ +G +YV EAKL F+IRIRGIN + PK +K+LQL RLRQI NGVF+++NKATVNML
Sbjct: 68 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNML 127
Query: 558 RIAEPSIAWGYPNLKSVRELVYXRGFAKLSGPRIPITSNSXVEXXLHXPXXXXXXXXXXX 737
R EP + +GYPNLKSV+EL+Y RG+ KL+ RI +T NS V+ L
Sbjct: 128 RRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHE 187
Query: 738 XXXXXXKFKYPSXSLWPFXLXHPTGXXXPXXHSYVDXG 851
FK + LWPF L P G + YV+ G
Sbjct: 188 IMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGG 225
>At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 191 bits (466), Expect = 5e-49
Identities = 99/225 (44%), Positives = 132/225 (58%)
Frame = +3
Query: 177 DSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKER 356
+++ VPESVLK Q + +K++ IF RA+QY KEY+ KER
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKER 62
Query: 357 DEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLN 536
+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK +K+LQL RLRQI NGVF+++N
Sbjct: 63 ELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVN 122
Query: 537 KATVNMLRIAEPSIAWGYPNLKSVRELVYXRGFAKLSGPRIPITSNSXVEXXLHXPXXXX 716
KAT+NMLR EP + +GYPNLKSV+EL+Y RGF KL+ R +T NS V+ L
Sbjct: 123 KATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIIC 182
Query: 717 XXXXXXXXXXXXXKFKYPSXSLWPFXLXHPTGXXXPXXHSYVDXG 851
FK + LWPF L P G + YV+ G
Sbjct: 183 VEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGG 227
>At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 191 bits (466), Expect = 5e-49
Identities = 99/225 (44%), Positives = 132/225 (58%)
Frame = +3
Query: 177 DSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKER 356
+++ VPESVLK Q + +K++ IF RA+QY KEY+ KER
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKER 62
Query: 357 DEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLN 536
+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK +K+LQL RLRQI NGVF+++N
Sbjct: 63 ELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVN 122
Query: 537 KATVNMLRIAEPSIAWGYPNLKSVRELVYXRGFAKLSGPRIPITSNSXVEXXLHXPXXXX 716
KAT+NMLR EP + +GYPNLKSV+EL+Y RGF KL+ R +T NS V+ L
Sbjct: 123 KATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIIC 182
Query: 717 XXXXXXXXXXXXXKFKYPSXSLWPFXLXHPTGXXXPXXHSYVDXG 851
FK + LWPF L P G + YV+ G
Sbjct: 183 VEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGG 227
>At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 191 bits (466), Expect = 5e-49
Identities = 99/225 (44%), Positives = 132/225 (58%)
Frame = +3
Query: 177 DSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKER 356
+++ VPESVLK Q + +K++ IF RA+QY KEY+ KER
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKER 62
Query: 357 DEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLN 536
+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK +K+LQL RLRQI NGVF+++N
Sbjct: 63 ELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVN 122
Query: 537 KATVNMLRIAEPSIAWGYPNLKSVRELVYXRGFAKLSGPRIPITSNSXVEXXLHXPXXXX 716
KAT+NMLR EP + +GYPNLKSV+EL+Y RGF KL+ R +T NS V+ L
Sbjct: 123 KATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIIC 182
Query: 717 XXXXXXXXXXXXXKFKYPSXSLWPFXLXHPTGXXXPXXHSYVDXG 851
FK + LWPF L P G + YV+ G
Sbjct: 183 VEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGG 227
>At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B)
Length = 242
Score = 189 bits (461), Expect = 2e-48
Identities = 99/218 (45%), Positives = 128/218 (58%)
Frame = +3
Query: 198 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLAR 377
VPESVLK Q + + ++ IFKRAEQY KEY KE++ I L R
Sbjct: 8 VPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKELISLKR 67
Query: 378 QARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNML 557
+A+ +G +YV EAKL F+IRIRGIN + PK +K+LQL RLRQI NGVF+++NKAT+NML
Sbjct: 68 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNML 127
Query: 558 RIAEPSIAWGYPNLKSVRELVYXRGFAKLSGPRIPITSNSXVEXXLHXPXXXXXXXXXXX 737
R EP + +G+PNLKSV+EL+Y RG+ KL+ RI +T NS VE L
Sbjct: 128 RRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHE 187
Query: 738 XXXXXXKFKYPSXSLWPFXLXHPTGXXXPXXHSYVDXG 851
FK + LWPF L P G + YV+ G
Sbjct: 188 ILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGG 225
>At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) similar
to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo
sapiens]
Length = 247
Score = 107 bits (257), Expect = 1e-23
Identities = 56/175 (32%), Positives = 93/175 (53%)
Frame = +3
Query: 171 KEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIK 350
+E++K L +PE VLK + S KKK KR E +V E+R K
Sbjct: 3 EEEAKGLDYIPEIVLKKRKNRDELAFIRKKQLELGNSGKKKKKVSDIKRPEDFVHEFRAK 62
Query: 351 ERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVR 530
E D IR+ ++ + + P ++ L F+IRI+G N + PK +++L +L+ + GVF +
Sbjct: 63 EVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAK 122
Query: 531 LNKATVNMLRIAEPSIAWGYPNLKSVRELVYXRGFAKLSGPRIPITSNSXVEXXL 695
+ L +P + +GYPN KSV++L+Y +G + G +P+T N+ +E L
Sbjct: 123 ATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQAL 177
>At5g38830.1 68418.m04697 tRNA synthetase class I (C) family protein
similar to SP|Q06752 Cysteinyl-tRNA synthetase (EC
6.1.1.16) (Cysteine--tRNA ligase) (CysRS) {Bacillus
subtilis}; contains Pfam profile PF01406: tRNA
synthetases class I (C)
Length = 511
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +1
Query: 196 LYQSQCSSIVRGERLFALG---DYRLR*RGVLLPSRRRGKSSRGLNSTSRNTASRNVMKS 366
+ + C +V G+ F++ +Y + G LL R G+ ++S RN A + K+
Sbjct: 134 IIEKDCGYVVEGDVFFSVDKSPNYG-KLSGQLLEHTRAGERV-AVDSRKRNPADFALWKA 191
Query: 367 D*PDKHAIVATTTFPGKPNWHLSSESVVSTKFHRRSVKF 483
PD+ + + PG+P WH+ ++ H S KF
Sbjct: 192 AKPDEPSWESPWG-PGRPGWHIECSAM---SVHYLSPKF 226
>At3g52860.1 68416.m05825 expressed protein
Length = 156
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 255 LQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEI 365
++ LK + IKK +F+ +++ VKE K RDE+
Sbjct: 117 MEEELKTKDELIKKHMRLFQESQKLVKEQIEKHRDEL 153
>At3g18100.2 68416.m02302 myb family transcription factor (MYB4R1)
contains Pfam profile: PF00249 Myb-like DNA-binding
domain
Length = 634
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 376 DKHAIVATTTFPGKPNWHLSSESVVSTKFHRRSVKFCNCLD 498
DK VA T F G NWH S+ V + ++ NCLD
Sbjct: 341 DKRVKVAVTLF-GSQNWHKISQFVPGRTQTQCRERWLNCLD 380
>At3g18100.1 68416.m02301 myb family transcription factor (MYB4R1)
contains Pfam profile: PF00249 Myb-like DNA-binding
domain
Length = 847
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 376 DKHAIVATTTFPGKPNWHLSSESVVSTKFHRRSVKFCNCLD 498
DK VA T F G NWH S+ V + ++ NCLD
Sbjct: 554 DKRVKVAVTLF-GSQNWHKISQFVPGRTQTQCRERWLNCLD 593
>At4g31470.1 68417.m04471 pathogenesis-related protein, putative
similar to pathogenesis related protein-1 from Zea mays
GI:3290004; contains Pfam profile PF00188: SCP-like
extracellular protein
Length = 185
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -3
Query: 612 HGHSLSWGIPKQWKARRYVA--YSQ*PYSDVQTHHC 511
+G +L WG K W R VA S+ Y D +T HC
Sbjct: 100 YGENLFWGSGKGWTPRDAVAAWASEMKYYDRRTSHC 135
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,645,714
Number of Sequences: 28952
Number of extensions: 309755
Number of successful extensions: 703
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2188225800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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