Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_D19
         (947 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    29   0.062
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       29   0.081
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   3.1  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   5.3  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    22   9.3  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    22   9.3  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 29.1 bits (62), Expect = 0.062
 Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
 Frame = +2

Query: 761 PRGPXPPXXXSPPPXPXXX-PFPXPXPTPPXPXXPXXAXRXPXXPPP--LPPPXPP 919
           PR P P     P   P    P   P P PP P         P    P  +P P PP
Sbjct: 109 PRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPP 164



 Score = 23.0 bits (47), Expect = 4.0
 Identities = 12/36 (33%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
 Frame = +2

Query: 818 PFPXPXPTPPXPXXPXXAXRXPXXPPP--LPPPXPP 919
           P   P P PP P         P    P  +P P PP
Sbjct: 103 PVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPP 138



 Score = 21.8 bits (44), Expect = 9.3
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P   P    P   P   PP P
Sbjct: 38  PEAEPGNNRPIYIPQPRPPHPRLRREAEPKAEPGNNRPIYIPQPRPPHP 86


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 28.7 bits (61), Expect = 0.081
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = +3

Query: 756 PPPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPP 899
           P   AP P P    P   P        P P   PPP  P G P    P
Sbjct: 16  PSSGAPGPQPS---PHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60



 Score = 25.8 bits (54), Expect = 0.57
 Identities = 14/42 (33%), Positives = 15/42 (35%)
 Frame = +2

Query: 806 PXXXPFPXPXPTPPXPXXPXXAXRXPXXPPPLPPPXPPXXXP 931
           P   P P   P  P    P    + P  PP  PP  PP   P
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGP--PPGGPPGAPPSQNP 60



 Score = 24.2 bits (50), Expect = 1.8
 Identities = 13/39 (33%), Positives = 13/39 (33%), Gaps = 1/39 (2%)
 Frame = +3

Query: 834 GPPPXXRPPPXXPX-GRPXXPPPFPXPPPPXXLPXXPXP 947
           GP P     P  P  G P  P   P P  P   P    P
Sbjct: 22  GPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60



 Score = 23.8 bits (49), Expect = 2.3
 Identities = 13/38 (34%), Positives = 13/38 (34%)
 Frame = +2

Query: 830 PXPTPPXPXXPXXAXRXPXXPPPLPPPXPPXXXPPXPP 943
           P P P     P    R     PP P   PP   PP  P
Sbjct: 21  PGPQPSPHQSPQAPQRGS---PPNPSQGPPPGGPPGAP 55



 Score = 22.6 bits (46), Expect = 5.3
 Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
 Frame = +2

Query: 824 PXPXPTP-PXPXXPXXAXRXPXXPPPLPPPX-PPXXXPPXPP 943
           P P P+P   P  P      P  P   PPP  PP   P   P
Sbjct: 21  PGPQPSPHQSPQAPQRGS--PPNPSQGPPPGGPPGAPPSQNP 60



 Score = 22.2 bits (45), Expect = 7.1
 Identities = 11/38 (28%), Positives = 12/38 (31%)
 Frame = +2

Query: 794 PPPXPXXXPFPXPXPTPPXPXXPXXAXRXPXXPPPLPP 907
           P P P   P      +PP P         P  PP   P
Sbjct: 23  PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +2

Query: 890 PPPLPPPXPPXXXPP 934
           P P PPP PP    P
Sbjct: 339 PKPAPPPPPPSSSGP 353



 Score = 22.2 bits (45), Expect = 7.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 894 PPFPXPPPP 920
           PP P PPPP
Sbjct: 338 PPKPAPPPP 346


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 14/49 (28%), Positives = 15/49 (30%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P  +P    P   P   PP P
Sbjct: 233 PEAEPGNNRPVYIPQPRPPHPRLRREAKPEAKPGNNRPVYIPQPRPPHP 281



 Score = 21.8 bits (44), Expect = 9.3
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P   P    P   P   PP P
Sbjct: 37  PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 85



 Score = 21.8 bits (44), Expect = 9.3
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P   P    P   P   PP P
Sbjct: 177 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 225



 Score = 21.8 bits (44), Expect = 9.3
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P   P    P   P   PP P
Sbjct: 205 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 253


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P   P    P   P   PP P
Sbjct: 38  PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 86



 Score = 21.8 bits (44), Expect = 9.3
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P   P    P   P   PP P
Sbjct: 66  PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 114



 Score = 21.8 bits (44), Expect = 9.3
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P   P    P   P   PP P
Sbjct: 94  PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 142


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P   P    P   P   PP P
Sbjct: 9   PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 57



 Score = 21.8 bits (44), Expect = 9.3
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P   P    P   P   PP P
Sbjct: 37  PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 85



 Score = 21.8 bits (44), Expect = 9.3
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P   P    P   P   PP P
Sbjct: 65  PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 113



 Score = 21.8 bits (44), Expect = 9.3
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P   P    P   P   PP P
Sbjct: 93  PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 141



 Score = 21.8 bits (44), Expect = 9.3
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P   P    P   P   PP P
Sbjct: 121 PEAEPGNNRPVYIPQPRPPHPRLRREAKPEAEPGNNRPVYIPQPRPPHP 169



 Score = 21.8 bits (44), Expect = 9.3
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 759 PPAAPXPLPXXXPPXXPPPXXSXXRGPPPXXRPPPXXPXGRPXXPPPFP 905
           P A P        P   PP     R   P   P    P   P   PP P
Sbjct: 149 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,663
Number of Sequences: 438
Number of extensions: 9912
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31081323
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)