Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_D16
(958 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7KCW5 Cluster: Ribosomal protein L14; n=1; Heliconius ... 265 1e-69
UniRef50_P55841 Cluster: 60S ribosomal protein L14; n=13; Neopte... 169 9e-41
UniRef50_Q201X6 Cluster: Ribosomal protein L14-like; n=2; Neopte... 165 1e-39
UniRef50_Q16Q18 Cluster: 60S ribosomal protein L14; n=4; Endopte... 154 3e-36
UniRef50_P50914 Cluster: 60S ribosomal protein L14; n=54; Deuter... 131 2e-29
UniRef50_O46160 Cluster: 60S ribosomal protein L14; n=3; Coeloma... 128 2e-28
UniRef50_Q8ITA2 Cluster: Ribosomal protein L14; n=21; Eumetazoa|... 127 4e-28
UniRef50_Q4PM06 Cluster: 60S ribosomal protein L14; n=1; Ixodes ... 126 1e-27
UniRef50_Q15ER7 Cluster: 60S ribosomal protein L14-like protein;... 126 1e-27
UniRef50_Q4KTH1 Cluster: L14; n=1; Suberites domuncula|Rep: L14 ... 122 2e-26
UniRef50_P38754 Cluster: 60S ribosomal protein L14-B; n=12; Dika... 110 4e-23
UniRef50_Q7XYA7 Cluster: 60S ribosomal protein L14; n=1; Griffit... 110 6e-23
UniRef50_Q9XVE9 Cluster: Putative uncharacterized protein rpl-14... 104 3e-21
UniRef50_A7NXE0 Cluster: Chromosome chr5 scaffold_2, whole genom... 103 9e-21
UniRef50_Q5KAB9 Cluster: Ribosomal protein, putative; n=2; Dikar... 100 6e-20
UniRef50_Q9SIM4 Cluster: 60S ribosomal protein L14-1; n=16; Stre... 96 1e-18
UniRef50_Q5CUW3 Cluster: Ribosomal protein L14; n=2; Cryptospori... 91 3e-17
UniRef50_Q0CGW3 Cluster: 60S ribosomal protein L14-A; n=18; Asco... 85 3e-15
UniRef50_Q4N7Z5 Cluster: 60S ribosomal protein L14, putative; n=... 84 4e-15
UniRef50_A0DIQ7 Cluster: Chromosome undetermined scaffold_52, wh... 83 8e-15
UniRef50_A5K0T3 Cluster: 60S ribosomal protein L14, putative; n=... 83 1e-14
UniRef50_A7AS85 Cluster: Ribosomal protein L14, putative; n=1; B... 82 2e-14
UniRef50_A4RZ62 Cluster: Ribosomal protein L14, component of cyt... 80 7e-14
UniRef50_A2FS39 Cluster: Ribosomal protein L14, putative; n=3; T... 79 2e-13
UniRef50_UPI00004988BB Cluster: 60S ribosomal protein L14; n=3; ... 78 3e-13
UniRef50_Q7R351 Cluster: GLP_554_43610_43215; n=1; Giardia lambl... 76 2e-12
UniRef50_Q54Z09 Cluster: Ribosomal protein L14; n=1; Dictyosteli... 70 1e-10
UniRef50_Q25278 Cluster: Probable 60S ribosomal protein L14; n=1... 56 2e-06
UniRef50_A5DK36 Cluster: Putative uncharacterized protein; n=1; ... 44 0.008
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 36 1.2
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 36 1.5
UniRef50_A7AEV3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.7
UniRef50_Q4EIW9 Cluster: Putative uncharacterized protein; n=1; ... 34 4.7
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 34 6.2
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 34 6.2
>UniRef50_A7KCW5 Cluster: Ribosomal protein L14; n=1; Heliconius
melpomene|Rep: Ribosomal protein L14 - Heliconius
melpomene
Length = 167
Score = 265 bits (649), Expect = 1e-69
Identities = 125/145 (86%), Positives = 134/145 (92%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
MPF RYVEPGRVALVA+G LKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF
Sbjct: 1 MPFQRYVEPGRVALVAEGSLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 60
Query: 272 RLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRN 451
RLKY FTAPTR+VRKAW+DAKLNEKW +SQWA+ LANKEKRA M+D+DRFKL AAR KRN
Sbjct: 61 RLKYPFTAPTRVVRKAWSDAKLNEKWADSQWAKNLANKEKRADMSDFDRFKLNAARGKRN 120
Query: 452 RARTAVFKSLKVKAARAGTFGKKNI 526
RARTAVFKSLKVKAAR G FGK+ +
Sbjct: 121 RARTAVFKSLKVKAARGGVFGKRKV 145
>UniRef50_P55841 Cluster: 60S ribosomal protein L14; n=13;
Neoptera|Rep: 60S ribosomal protein L14 - Drosophila
melanogaster (Fruit fly)
Length = 166
Score = 169 bits (411), Expect = 9e-41
Identities = 76/139 (54%), Positives = 102/139 (73%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
MPF R+V+ GR+A + GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+
Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKY 60
Query: 272 RLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRN 451
R+K+ +TAPTR+VRKAWT++ L +W S W+ K N KR+ + D+DRFKL A+ +RN
Sbjct: 61 RIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRN 120
Query: 452 RARTAVFKSLKVKAARAGT 508
+ T F +LK + GT
Sbjct: 121 KLLTIAFNTLKKRTKADGT 139
>UniRef50_Q201X6 Cluster: Ribosomal protein L14-like; n=2;
Neoptera|Rep: Ribosomal protein L14-like - Acyrthosiphon
pisum (Pea aphid)
Length = 149
Score = 165 bits (401), Expect = 1e-39
Identities = 72/130 (55%), Positives = 98/130 (75%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
MPF R+VE GRV V DGP KGK+VS+VD IDQ LVDGP +GVPR ++R++Q+HLTKF
Sbjct: 1 MPFKRFVETGRVVYVVDGPYKGKIVSIVDCIDQKTVLVDGPETGVPRSKMRISQIHLTKF 60
Query: 272 RLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRN 451
++ + + TR VR+AW A LN+ W +S+WA+K AN+EKRA + D++RFKL AR RN
Sbjct: 61 KINFPYNGSTRTVRQAWKKADLNKLWVQSRWAEKAANREKRASLGDFERFKLKRARKIRN 120
Query: 452 RARTAVFKSL 481
+ RT V+++L
Sbjct: 121 KIRTNVYQAL 130
>UniRef50_Q16Q18 Cluster: 60S ribosomal protein L14; n=4;
Endopterygota|Rep: 60S ribosomal protein L14 - Aedes
aegypti (Yellowfever mosquito)
Length = 229
Score = 154 bits (374), Expect = 3e-36
Identities = 75/146 (51%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
Frame = +2
Query: 83 KNVMPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHL 262
++ M F R+VE GRVA A G KGKLV++V+VIDQ R L+DGP +GVPRQQ +N LHL
Sbjct: 49 RSKMTFTRFVETGRVAKCASGKYKGKLVAIVNVIDQNRVLIDGPTTGVPRQQYPVNHLHL 108
Query: 263 TKFRLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARV 442
TK+R+K+ +TA +++VRKA L EK++ ++W ++ A K KR +TD+DRFKL AR
Sbjct: 109 TKYRVKFPYTAKSKVVRKALEAYNLKEKFSTTRWQERAAAKAKRCNLTDFDRFKLRLARS 168
Query: 443 KRNRARTAVFKSLKVKAARAG-TFGK 517
+RNR +A FK LK + G FGK
Sbjct: 169 ERNRIVSAQFKKLKKEVVNNGMLFGK 194
>UniRef50_P50914 Cluster: 60S ribosomal protein L14; n=54;
Deuterostomia|Rep: 60S ribosomal protein L14 - Homo
sapiens (Human)
Length = 213
Score = 131 bits (317), Expect = 2e-29
Identities = 69/143 (48%), Positives = 93/143 (65%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
M F R+VE GRVA V+ GP GKLV++VDVIDQ RALVDGP + V RQ + + LT F
Sbjct: 1 MVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDF 60
Query: 272 RLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRN 451
LK+ +A + VR+AW A +N KW ++WA+K+ +E++A+MTD+DRFK+ A+ RN
Sbjct: 61 ILKFPHSAHQKYVRQAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRN 120
Query: 452 RARTAVFKSLKVKAARAGTFGKK 520
R K L+ KAA KK
Sbjct: 121 RIIKNEVKKLQ-KAALLKASPKK 142
>UniRef50_O46160 Cluster: 60S ribosomal protein L14; n=3;
Coelomata|Rep: 60S ribosomal protein L14 - Lumbricus
rubellus (Humus earthworm)
Length = 152
Score = 128 bits (309), Expect = 2e-28
Identities = 63/131 (48%), Positives = 87/131 (66%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
M F R+VE GRVA GP +GKLV++VDVIDQ RALVDGP + V R+ + +L LT
Sbjct: 1 MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNL 60
Query: 272 RLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRN 451
+ K+ +A T +V+KAW ++++KW ES A+K+A KEKR +TD++RFKL A+ RN
Sbjct: 61 KAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARN 120
Query: 452 RARTAVFKSLK 484
R F L+
Sbjct: 121 RLIKIEFGKLR 131
>UniRef50_Q8ITA2 Cluster: Ribosomal protein L14; n=21;
Eumetazoa|Rep: Ribosomal protein L14 - Aequipecten
irradians (Bay scallop) (Argopecten irradians)
Length = 160
Score = 127 bits (307), Expect = 4e-28
Identities = 63/132 (47%), Positives = 81/132 (61%)
Frame = +2
Query: 107 YVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYA 286
+VE GRVAL A GP KGKL +VDVIDQ RALVDGP +GV R+Q+ LHLT+F+L
Sbjct: 17 FVEIGRVALFAYGPDKGKLCVIVDVIDQNRALVDGPATGVKRKQVNYKSLHLTQFKLNIG 76
Query: 287 FTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTA 466
T + K W + KW + WA+K+ANK R ++D+DRFKL A+ RNR
Sbjct: 77 RAMRTGNLLKVWNKESMQSKWDATSWAKKIANKSLRKSLSDFDRFKLMKAKQARNRLIAI 136
Query: 467 VFKSLKVKAARA 502
LK +A +A
Sbjct: 137 ECGKLKKQAKKA 148
>UniRef50_Q4PM06 Cluster: 60S ribosomal protein L14; n=1; Ixodes
scapularis|Rep: 60S ribosomal protein L14 - Ixodes
scapularis (Black-legged tick) (Deer tick)
Length = 151
Score = 126 bits (303), Expect = 1e-27
Identities = 60/137 (43%), Positives = 87/137 (63%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
MP YVE GRVA + G +GKL ++V+V+DQ RA+VDGP +GVPRQ + L L LT+
Sbjct: 1 MPLRTYVEIGRVAYLTQGKQRGKLCTIVNVVDQNRAVVDGPSTGVPRQAVPLKHLRLTRQ 60
Query: 272 RLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRN 451
+L+ + T++VR+AW + KW ES +A+KLA ++ +A M+D+DRFKL + N
Sbjct: 61 KLRIPHSTSTKVVRRAWEKEGVTAKWKESAFAKKLAARKLKANMSDFDRFKLKRTKQAMN 120
Query: 452 RARTAVFKSLKVKAARA 502
R F LK A ++
Sbjct: 121 RLVRVRFLKLKALAKKS 137
>UniRef50_Q15ER7 Cluster: 60S ribosomal protein L14-like protein;
n=2; Schistosoma|Rep: 60S ribosomal protein L14-like
protein - Schistosoma mansoni (Blood fluke)
Length = 146
Score = 126 bits (303), Expect = 1e-27
Identities = 60/131 (45%), Positives = 80/131 (61%)
Frame = +2
Query: 98 FARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRL 277
F R+VE GRV +A GP K+ +V++IDQ R L+DGP SGVPRQ+I LN+LHLTK +
Sbjct: 4 FTRFVEAGRVVFIASGPYAKKVAIIVEIIDQRRVLIDGPCSGVPRQEISLNKLHLTKLKY 63
Query: 278 KYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRA 457
K T V + W + + W + WA+KL K RA MTD+DRFK+ AR +RN
Sbjct: 64 KLPHGCGTNSVERHWKRYDITKDWENTAWARKLHRKSLRAAMTDFDRFKVMVARKQRNN- 122
Query: 458 RTAVFKSLKVK 490
+ K K+K
Sbjct: 123 ---ILKQFKLK 130
>UniRef50_Q4KTH1 Cluster: L14; n=1; Suberites domuncula|Rep: L14 -
Suberites domuncula (Sponge)
Length = 136
Score = 122 bits (293), Expect = 2e-26
Identities = 60/137 (43%), Positives = 92/137 (67%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
M F R+VE GRVAL+ DG +GKL ++DV+DQ RALVDGPG + RQ I ++L LT F
Sbjct: 1 MVFKRFVEVGRVALINDGLNRGKLCVILDVVDQRRALVDGPG--LKRQAISFSKLSLTDF 58
Query: 272 RLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRN 451
+K + +A + V+ A+ +A + KW ++ WA+++A K+KR ++TD+DRFKL R +++
Sbjct: 59 TVKISRSAREKQVKAAFENADIATKWEQTSWAKRIARKDKRTKLTDFDRFKLRVLRQQKS 118
Query: 452 RARTAVFKSLKVKAARA 502
R + +K +AA A
Sbjct: 119 RIVRGQYYKIKKEAAAA 135
>UniRef50_P38754 Cluster: 60S ribosomal protein L14-B; n=12;
Dikarya|Rep: 60S ribosomal protein L14-B - Saccharomyces
cerevisiae (Baker's yeast)
Length = 138
Score = 110 bits (265), Expect = 4e-23
Identities = 55/126 (43%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Frame = +2
Query: 104 RYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKY 283
R VE GRV L+ G GKL ++V++IDQ + L+DGP +GVPRQ I L Q+ LT
Sbjct: 13 RLVEVGRVVLIKKGQSAGKLAAIVEIIDQKKVLIDGPKAGVPRQAINLGQVVLTPLTFAL 72
Query: 284 AFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAAR-VKRNRAR 460
A T V K W A + EKW S WA+K+A +E+RA +TD++RF++ R KR +
Sbjct: 73 PRGARTATVSKKWAAAGVCEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYTVK 132
Query: 461 TAVFKS 478
A+ K+
Sbjct: 133 KALAKA 138
>UniRef50_Q7XYA7 Cluster: 60S ribosomal protein L14; n=1;
Griffithsia japonica|Rep: 60S ribosomal protein L14 -
Griffithsia japonica (Red alga)
Length = 133
Score = 110 bits (264), Expect = 6e-23
Identities = 57/132 (43%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
M F R+VE GRVALV+ G KLV +VD++DQ R LVD P G+ R+ I + ++ LT
Sbjct: 1 MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSI 60
Query: 272 RL-KYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKR 448
++ A AP V+ +T AK++E + S W +KLA +EKRA + D+ RFK+ AR+K+
Sbjct: 61 KVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKK 120
Query: 449 NRARTAVFKSLK 484
++A A LK
Sbjct: 121 SKAINAELAKLK 132
>UniRef50_Q9XVE9 Cluster: Putative uncharacterized protein rpl-14;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein rpl-14 - Caenorhabditis elegans
Length = 135
Score = 104 bits (250), Expect = 3e-21
Identities = 55/131 (41%), Positives = 78/131 (59%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
M F R V+ GRV +A G +GKL ++V+VID R +DGP S V R L L LTKF
Sbjct: 1 MVFNRVVQIGRVVFIASGKDQGKLAAIVNVIDGNRVQIDGPSSDVTRTVRNLKDLQLTKF 60
Query: 272 RLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRN 451
LK T+ V+ A+ AK+ E + ++QWA+K+A + RA++TD++R+KL A+ RN
Sbjct: 61 VLKLRVGQRTKGVKAAFDAAKVTENFQKTQWAKKIAQRAIRAKLTDFERYKLMKAKQMRN 120
Query: 452 RARTAVFKSLK 484
R LK
Sbjct: 121 RIVRVELAKLK 131
>UniRef50_A7NXE0 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=19; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 301
Score = 103 bits (246), Expect = 9e-21
Identities = 56/135 (41%), Positives = 77/135 (57%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
MPF RYVE GRVALV G G+LV +VDVIDQ RALVD P + R Q+ +L LT
Sbjct: 168 MPFKRYVEVGRVALVNYGKDYGRLVVIVDVIDQNRALVDAP--DMVRCQMNFKRLSLTDI 225
Query: 272 RLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRN 451
++ + + +A T A + KW S W +KL +++RA + D+DRFK+ A++KR
Sbjct: 226 KIDIKRVPKKKTLIEAMTAADVKNKWENSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRG 285
Query: 452 RARTAVFKSLKVKAA 496
LK + A
Sbjct: 286 GVIRQELAKLKKQTA 300
>UniRef50_Q5KAB9 Cluster: Ribosomal protein, putative; n=2;
Dikarya|Rep: Ribosomal protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 139
Score = 100 bits (239), Expect = 6e-20
Identities = 55/134 (41%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Frame = +2
Query: 98 FARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRL 277
F R+VE GRV LV +GP GKL +V++ID RAL+DGP + V RQ L LT + +
Sbjct: 6 FKRFVEVGRVVLVNEGPSAGKLAVIVEIIDHNRALIDGPTTSVSRQAFPYRNLILTPYTI 65
Query: 278 -KYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKL-TAARVKRN 451
++KA A ++EKW +S WA+KLA ++ R TD+DRF++ A R +R+
Sbjct: 66 ASLPRGVGAGPLKKAIEKAGVSEKWEQSGWAKKLAARQVRKNATDFDRFQIQLAKRARRD 125
Query: 452 RARTAVFKSLKVKA 493
R A K K A
Sbjct: 126 VVRKAYVKEKKASA 139
>UniRef50_Q9SIM4 Cluster: 60S ribosomal protein L14-1; n=16;
Streptophytina|Rep: 60S ribosomal protein L14-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 95.9 bits (228), Expect = 1e-18
Identities = 51/119 (42%), Positives = 73/119 (61%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
M F R+VE GRVALV G GKLV +VDV+DQ RALVD P + R Q+ L +L LT
Sbjct: 1 MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAP--DMERIQMNLKRLSLTDI 58
Query: 272 RLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKR 448
+ +++ +A A + KW +S W +KL +++RA + D+DRFK+ A++KR
Sbjct: 59 VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKR 117
>UniRef50_Q5CUW3 Cluster: Ribosomal protein L14; n=2;
Cryptosporidium|Rep: Ribosomal protein L14 -
Cryptosporidium parvum Iowa II
Length = 125
Score = 91.5 bits (217), Expect = 3e-17
Identities = 48/117 (41%), Positives = 67/117 (57%)
Frame = +2
Query: 98 FARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRL 277
F R+VEPGR+ + GP GK+ ++DVI+ R L+DGP + V RQ I L +L LT F+
Sbjct: 5 FTRFVEPGRLCRIQYGPDTGKMCFIIDVINMNRILIDGPSTNVARQSIPLKRLALTDFKA 64
Query: 278 KYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKR 448
K A T V+K E + ++ + QK A K +A MTD++R L AR KR
Sbjct: 65 KIPRGARTGTVKKILEKDNTIENFNKTTYGQKCAAKIFKANMTDFERHALLVARKKR 121
>UniRef50_Q0CGW3 Cluster: 60S ribosomal protein L14-A; n=18;
Ascomycota|Rep: 60S ribosomal protein L14-A -
Aspergillus terreus (strain NIH 2624)
Length = 149
Score = 85.0 bits (201), Expect = 3e-15
Identities = 53/137 (38%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Frame = +2
Query: 104 RYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSG----VPRQQIRLNQLHLTKF 271
+ VE GRV L+ GP GKL ++V+++D R LVDGP + VPR + L LT F
Sbjct: 12 KLVEVGRVVLIRRGPYTGKLAAIVEIVDHRRVLVDGPSTEENKIVPRHVLPLAHATLTHF 71
Query: 272 RL-KYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKR 448
+ + A T VRK W +++ KW +S AQK E+R + D++RFK+ R
Sbjct: 72 VIPQLPRAAGTGPVRKLWQKNEIDGKWAKSSIAQKTERAERRKNLNDFERFKVLRL---R 128
Query: 449 NRARTAVFKS-LKVKAA 496
+AR V KS K++AA
Sbjct: 129 KQARFEVQKSHAKLRAA 145
>UniRef50_Q4N7Z5 Cluster: 60S ribosomal protein L14, putative; n=2;
Theileria|Rep: 60S ribosomal protein L14, putative -
Theileria parva
Length = 130
Score = 84.2 bits (199), Expect = 4e-15
Identities = 50/130 (38%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Frame = +2
Query: 92 MP-FARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPG-SGVPRQQIRLNQLHLT 265
MP F ++VEPGR+ L+ GP GKLV VVD++ TR LVDG +GV RQQ+ L LT
Sbjct: 1 MPLFKKFVEPGRLCLLTYGPNSGKLVFVVDIVTPTRVLVDGADVTGVKRQQVPKTWLKLT 60
Query: 266 KFRLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVK 445
R++ A T + KA E + ++ +KL EK+ + D+ RFKL +A+ +
Sbjct: 61 DVRVELQRGARTGTLSKAAKAQNALELFDKTSLGKKLRVLEKKKNLNDFQRFKLMSAKKQ 120
Query: 446 RNRARTAVFK 475
R + ++ K
Sbjct: 121 RRKVLKSLNK 130
>UniRef50_A0DIQ7 Cluster: Chromosome undetermined scaffold_52, whole
genome shotgun sequence; n=5; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_52, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 330
Score = 83.4 bits (197), Expect = 8e-15
Identities = 45/131 (34%), Positives = 77/131 (58%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
M ++VE GRV + GP +GKL ++V++++ R L+DGP +GV RQ I + +L LTK
Sbjct: 187 MVLGKFVEVGRVVKINYGPQEGKLATIVEILNDKRVLIDGPTTGVQRQVIPIRRLTLTKI 246
Query: 272 RLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRN 451
+ T ++ KA + ++ ++ A+K+A K RA++ D+DRF++ R +R+
Sbjct: 247 N-----SQRTGVITKAIKKSDPFAQYAQTIAAKKVAKKALRAKLNDFDRFRVMILRKRRS 301
Query: 452 RARTAVFKSLK 484
+ KSLK
Sbjct: 302 ALLSTQLKSLK 312
>UniRef50_A5K0T3 Cluster: 60S ribosomal protein L14, putative; n=6;
Plasmodium|Rep: 60S ribosomal protein L14, putative -
Plasmodium vivax
Length = 170
Score = 83.0 bits (196), Expect = 1e-14
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
Frame = +2
Query: 98 FARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPG-SGVPRQQIRLNQLHLTKFR 274
F R+VEPGR+ L+ GP GKL VVD++ TR +VDG +GVPR I L +L L K R
Sbjct: 21 FKRFVEPGRLCLIEYGPYAGKLCFVVDIVTLTRVIVDGAFITGVPRMVIPLKRLKLLKER 80
Query: 275 LKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNR 454
+K + ++K + ++ +S +KL K+KR TDY+RF++ A+ + +
Sbjct: 81 IKINKNCKSGFLQKTIKSTNILGEFKKSNLGKKLTIKKKRDLATDYERFQIYHAK-RELK 139
Query: 455 ARTAVFKSLK 484
+ + KS K
Sbjct: 140 KKMNMLKSKK 149
>UniRef50_A7AS85 Cluster: Ribosomal protein L14, putative; n=1;
Babesia bovis|Rep: Ribosomal protein L14, putative -
Babesia bovis
Length = 133
Score = 82.2 bits (194), Expect = 2e-14
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Frame = +2
Query: 92 MP-FARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPG-SGVPRQQIRLNQLHLT 265
MP F ++VEPGR+ L+ GP GKL +VD++ TR LVDG +GV RQQI + + LT
Sbjct: 1 MPLFKKFVEPGRLCLITYGPDAGKLCVIVDIVTNTRILVDGGMITGVERQQIPVTWIKLT 60
Query: 266 KFRLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVK 445
++ A T V KA + ++ +KL E+R +TD++RFKL+ A+ +
Sbjct: 61 DTKITLNRGAKTGTVGKAVKKFDALNAFKQTPLGKKLEIAERRKNLTDFERFKLSVAQKE 120
Query: 446 RNR 454
R R
Sbjct: 121 RRR 123
>UniRef50_A4RZ62 Cluster: Ribosomal protein L14, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L14, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 125
Score = 80.2 bits (189), Expect = 7e-14
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Frame = +2
Query: 104 RYVEPGRVALV---ADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFR 274
R VE GRVAL AD GKL+ +VD++D R LV PG V R I L ++ +T +
Sbjct: 2 RNVEIGRVALCNLKADARY-GKLLVIVDIVDMNRVLVAAPG--VKRDVISLRRVAITDMK 58
Query: 275 LKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRN 451
+ + AW A + W +S W +K+A + RA +TD++RFK+ AR KR+
Sbjct: 59 VDVERKCDEAALAAAWKSADVEGSWAKSAWGKKIARQNARANLTDFERFKVALARTKRS 117
>UniRef50_A2FS39 Cluster: Ribosomal protein L14, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein L14,
putative - Trichomonas vaginalis G3
Length = 128
Score = 79.0 bits (186), Expect = 2e-13
Identities = 43/120 (35%), Positives = 67/120 (55%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
MPF ++VE GR+AL+ G L KL +VD++D R L+D + PRQ I + +L LT +
Sbjct: 1 MPFKQFVEIGRIALINYGELVDKLAIIVDIVDDKRVLIDVLETEAPRQTIPILRLKLTDY 60
Query: 272 RLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRN 451
K A + A D L +++ ES W +++ ++ +AQM D+ RFK KR+
Sbjct: 61 VAKIQRNAAPEAAKAAAKD--LIKQFYESAWGKQVIARKNKAQMNDFQRFKYAQLVAKRD 118
>UniRef50_UPI00004988BB Cluster: 60S ribosomal protein L14; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L14 - Entamoeba histolytica HM-1:IMSS
Length = 135
Score = 78.2 bits (184), Expect = 3e-13
Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 4/132 (3%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPG--SGVPRQQIRLNQLHLT 265
M F+R+VE GRV L+ GP KL +V+++D R LVDGP +GVPRQ + LN + LT
Sbjct: 1 MVFSRFVEVGRVVLMKTGPFASKLAVIVEILDHNRVLVDGPQAITGVPRQVVNLNTISLT 60
Query: 266 KFRLKYAFTAPT-RLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARV 442
F + T + + +T + +++ ++ + + + R +MTD+D+F+++
Sbjct: 61 SFVVNKVTRGMTHKKLCLRFTQDAIIKRFNKTATGKAIEKRILREKMTDFDKFQVSIINR 120
Query: 443 KRN-RARTAVFK 475
K N A+ AV K
Sbjct: 121 KINAAAKIAVSK 132
>UniRef50_Q7R351 Cluster: GLP_554_43610_43215; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_43610_43215 - Giardia lamblia
ATCC 50803
Length = 131
Score = 75.8 bits (178), Expect = 2e-12
Identities = 41/131 (31%), Positives = 66/131 (50%)
Frame = +2
Query: 92 MPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKF 271
M + R+VE GR+ + DGP KGKL +VD++ L+DGP +GV RQ + L LT
Sbjct: 1 MSYHRFVEAGRLVYLGDGPDKGKLAVIVDILSTAAVLIDGPTTGVKRQVVSLRWAMLTDQ 60
Query: 272 RLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRN 451
+ + T ++K + + + S W +K+ + RA+ T D K+ R +R
Sbjct: 61 VINISEKPTTEQLKKEIEASPAIDTFMNSVWGKKIQQQRLRAKATFEDMGKIAKLRRERK 120
Query: 452 RARTAVFKSLK 484
A + S+K
Sbjct: 121 MAMKRIAMSIK 131
>UniRef50_Q54Z09 Cluster: Ribosomal protein L14; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L14 -
Dictyostelium discoideum AX4
Length = 157
Score = 69.7 bits (163), Expect = 1e-10
Identities = 44/138 (31%), Positives = 66/138 (47%)
Frame = +2
Query: 89 VMPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTK 268
+ F+ +VE GRV ++ G K ++DV+DQ RALV GP SGV R I ++LT
Sbjct: 2 ISKFSLFVEIGRVVVINYGEYINKTAVIIDVLDQNRALVAGPHSGVERHIINFKWINLTP 61
Query: 269 FRLKYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKR 448
++ A + A A L K +K+ + ++ TD++RFK R K
Sbjct: 62 LKVNIQRGARINTLIAAIKAADLETKIAALSAVKKINARATKSNQTDFERFKANLIRRKL 121
Query: 449 NRARTAVFKSLKVKAARA 502
N+ + K L A RA
Sbjct: 122 NKKVSGEVKKLVNIANRA 139
>UniRef50_Q25278 Cluster: Probable 60S ribosomal protein L14; n=15;
Eukaryota|Rep: Probable 60S ribosomal protein L14 -
Leishmania donovani
Length = 175
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/131 (23%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Frame = +2
Query: 101 ARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIR-LNQLHLTKFRL 277
+ Y+ GR+ + GP + ++ +VD++D R LV+ P + ++ L + K+ +
Sbjct: 4 SHYICAGRLVRILRGPRQDRVGVIVDIVDANRVLVENPEDAKMWRHVQNLKNVEPLKYCV 63
Query: 278 KYAFTAPTRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRA 457
+ + ++ A +K EK+ +++ A ++ K+ A TD++R++L AR R
Sbjct: 64 SVSRNCSAKALKDALASSKALEKYAKTRTAARVEAKKACAASTDFERYQLRVARRSRAHW 123
Query: 458 RTAVFKSLKVK 490
VF K
Sbjct: 124 ARKVFDEKDAK 134
>UniRef50_A5DK36 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 160
Score = 43.6 bits (98), Expect = 0.008
Identities = 44/124 (35%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = -2
Query: 474 LNTAVLARFLLTRAAVNL-NLS*SVICARFSLFANFWAH*LSVHFSLSLASVHAFLTRRV 298
L TA L +LL N NLS SV A L A F AH ++ H + A+ H +T V
Sbjct: 16 LATAFLTAYLLCFFNTNTWNLSKSVKAALLFLAAIFLAHEVAAHLASMSAAAHFLVTVPV 75
Query: 297 GAVNAYLRRNF-VRWSWFKRICCLGTPLPGPSTSARVWSITSTTLTNFPFKGPSATRATR 121
A L V K + CL T GPS +WSI ST + N + + TR
Sbjct: 76 LAPLGKLDNTIGVNTVLAKAMACLWTF--GPSIKTLLWSIISTMVAN---SLVALIKTTR 130
Query: 120 PGST 109
P ST
Sbjct: 131 PTST 134
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 36.3 bits (80), Expect = 1.2
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 104 RYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPG--SGVPRQQIRLNQLHLTKFRL 277
+ ++ GRV + G G+ VVD++D+ ++ GP +GV R+++ +N + T ++
Sbjct: 3 KVIDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKKI 62
Query: 278 KYAFTAPTRLVRKAWTDAKLNEKWTE 355
A V KA A L E E
Sbjct: 63 DIKRGASDDEVAKAIEAAGLVEYMRE 88
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 35.9 bits (79), Expect = 1.5
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 110 VEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHL 262
++ GR+A+V G G+ V VVD+ID+ LV G G +++ R+N H+
Sbjct: 4 IDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGAGLNKVKRR-RMNIKHI 53
>UniRef50_A7AEV3 Cluster: Putative uncharacterized protein; n=1;
Parabacteroides merdae ATCC 43184|Rep: Putative
uncharacterized protein - Parabacteroides merdae ATCC
43184
Length = 463
Score = 35.1 bits (77), Expect = 2.7
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Frame = +2
Query: 119 GRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAP 298
G VA +G K + + + T A G S VP + + + L +FR K A AP
Sbjct: 103 GNVAAYVEGIKKQYKLRCLVTLFGTMAFKAGKVSSVPEELVDEAERLLMQFRQKTAEGAP 162
Query: 299 TRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYD-------RFKLTAARVKRNRA 457
R + + +A W ++ +L ++ ++ + ++D +LT + +
Sbjct: 163 VRTIGELAAEA---VSWHYRRFGGELEAEQVKSGLAEFDYVTGGFHNTELTIVAGRPSDG 219
Query: 458 RTAVFKSLKVKAARAG 505
+TAV + + AARAG
Sbjct: 220 KTAVTLQMALNAARAG 235
>UniRef50_Q4EIW9 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 340
Score = 34.3 bits (75), Expect = 4.7
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +2
Query: 224 VPRQQIRLNQLHLTKFRLKYAFTAPTRLVRKAWTDAKL-NEKWTESQWAQKLANKEKRAQ 400
V + + QL T ++K + V++ T + N++W + + +K
Sbjct: 114 VVKDNVTAKQLQRTLTKIKQVDASKQTFVKELQTRYQAANKQWKQIKQLKKGIAAASMQN 173
Query: 401 MTDYDRFKLTAARVKRNRARTAVFKSLKVKAAR 499
YDR+ + +VK A+ A+ KSLK A+
Sbjct: 174 SNAYDRYAASVKKVKNKTAKAALTKSLKQLKAK 206
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 33.9 bits (74), Expect = 6.2
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Frame = +2
Query: 71 LRRCK----NVMPFARYVEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGP--GSGVPR 232
LRR K +V ++PG V ++ GP KGK V + + LV GP +GVP
Sbjct: 74 LRRAKCFSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLKALKSGLLLVTGPFKYNGVPL 133
Query: 233 QQIRLNQLHLTKFRLKYA-FTAPTRLVRKAWTDAKLNEKWTES 358
+++ + T R+ + F P + + + L E T++
Sbjct: 134 RRVNQCYVIATSTRIDISKFDVPKHIDDEYFRRVDLKESKTDA 176
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 33.9 bits (74), Expect = 6.2
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +2
Query: 110 VEPGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAF 289
+E GRV + G GK+ +VD++D+ +VDG V R++ + L T+ ++
Sbjct: 4 IEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGL---VKRRRCNIKHLEPTEKKVDIPK 60
Query: 290 TAPTRLVRKAWTDAKL 337
A T V+ A A L
Sbjct: 61 GASTEEVKLALDAAGL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,926,060
Number of Sequences: 1657284
Number of extensions: 12607145
Number of successful extensions: 41867
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39920
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88590537959
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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