Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_D10
(1019 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 36 0.040
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 34 0.16
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.37
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 32 0.65
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.85
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 32 0.85
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 31 1.1
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 31 1.5
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 4.5
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 29 4.5
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 4.5
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 6.0
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 29 6.0
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 6.0
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26) 29 6.0
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 29 7.9
SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055) 29 7.9
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 24 9.3
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 36.3 bits (80), Expect = 0.040
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -3
Query: 267 GAPPXPXX--FFXXXPPPPPRGGXPXXPXXPXP 175
G PP P F PPPPP GG P P P P
Sbjct: 651 GIPPPPPGGGMFPPPPPPPPGGGVPGPPKPPPP 683
Score = 33.1 bits (72), Expect = 0.37
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXP 175
PP P FF PPPPP GG P P P
Sbjct: 644 PPNP--FFGGIPPPPPGGGMFPPPPPPPP 670
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 562 GXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPPG 663
G P PP P P P P P P PPG
Sbjct: 651 GIPPPPPGGGMFPPPPPPPPGGGVPGPPKPPPPG 684
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 34.3 bits (75), Expect = 0.16
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXPG 154
PP PPPPP GG P P P P P G
Sbjct: 294 PPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGG 329
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Frame = +1
Query: 562 GXXPVPP------KSXXXPXXXPKGPTPXAPXPXXPTPPGRGXKIXP 684
G PVPP + P P G P P P P PPG G P
Sbjct: 287 GGAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPP 333
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 267 GAPPXPXXFFXXXPPPPPRGGXPXXPXXP 181
GAPP P PPPP GG P P P
Sbjct: 312 GAPPPPPP---PPPPPPGDGGAPPPPPPP 337
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 33.5 bits (73), Expect = 0.28
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P + PPPPP P P P P P P
Sbjct: 92 PPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPP 126
Score = 32.3 bits (70), Expect = 0.65
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -3
Query: 261 PPXPXXFFXXXP-PPPPRGGXPXXPXXPXPIXPXXP 157
PP P + P PPPP P P P P P P
Sbjct: 154 PPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPP 189
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 577 PPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
PP P P P P AP P P PP
Sbjct: 104 PPPPYPPPPNPPYPPPPNAPYPPPPNPP 131
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXX-PKGPTPXAPXPXXPTPP 660
P P PP P P P+P AP P P PP
Sbjct: 119 PPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPP 155
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -3
Query: 261 PPXPXXFFXXXP-PPPPRGGXPXXPXXPXPIXPXXP 157
PP P + P PPPP P P P P P P
Sbjct: 167 PPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAP 202
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPK-GPTPXAPXPXXPTPP 660
P P PP + P P P P AP P P PP
Sbjct: 190 PPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPP 226
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P P P P P P P AP P P PP
Sbjct: 175 PPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPP 210
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 33.1 bits (72), Expect = 0.37
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 264 APPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
APP P PPPPP P P P P P P
Sbjct: 74 APPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPPAP 109
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 32.3 bits (70), Expect = 0.65
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPP 404
Score = 32.3 bits (70), Expect = 0.65
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 264 APPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
+PP P PPPPP+ P P P P P P
Sbjct: 377 SPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Score = 32.3 bits (70), Expect = 0.65
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P P PP P P P P AP P P PP
Sbjct: 393 PQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 31.9 bits (69), Expect = 0.85
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P P PP P P+ P P P P P PP
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPP 409
Score = 31.9 bits (69), Expect = 0.85
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 571 PVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P PP S P P P P P P P PP
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P P
Sbjct: 390 PPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P P
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPP 406
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 264 APPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
+PP P PPPPP P P P P P P
Sbjct: 388 SPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPP 401
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPP 403
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P P PP P P P P P P P PP
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPP 413
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P P PP P P P P P P P PP
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P P
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P P
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P P
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P P
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P P PP P P P P P P P PP
Sbjct: 396 PPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P P
Sbjct: 397 PPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P P
Sbjct: 398 PPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P P PP P P P P P P P PP
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPP 411
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P P PP P P P P P P P PP
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P P PP P P P P P P P PP
Sbjct: 389 PPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P P PP P P P P P P P PP
Sbjct: 391 PPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 571 PVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P PP P P P P P P P PP
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPP 398
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P P PP S P P P P P P PP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPP 401
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPP 405
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPPGRGXKIXPR 687
P P PP P P P P P P P P R PR
Sbjct: 398 PPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALRLACAPPR 442
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 31.9 bits (69), Expect = 0.85
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP G P P P P P
Sbjct: 922 PPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPP 956
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXPG 154
PP P PPPPP GG P P P PG
Sbjct: 945 PPPPGG--NAPPPPPPPGGSAPPPGGGAPPLPPPPG 978
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 31.9 bits (69), Expect = 0.85
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 571 PVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P PP+ P P P+P P P P PP
Sbjct: 206 PPPPRPPPSPPPPPPPPSPSPPRPPPPPPP 235
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P P
Sbjct: 206 PPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRP 240
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
PP P PPPPP P P P P P P
Sbjct: 204 PPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPP 238
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 571 PVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
P PP S P P P P P P+PP
Sbjct: 209 PRPPPSPPPPPPPPSPSPPRPPPPPPPSPP 238
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 577 PPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
PP P P P P +P P P PP
Sbjct: 205 PPPPPRPPPSPPPPPPPPSPSPPRPPPP 232
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 562 GXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
G P PP P P P P P P P PP
Sbjct: 461 GQAPPPPPPPPPPPPPPPPPPPPPPPPFPPPPP 493
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -3
Query: 264 APPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXPGT 151
APP P PPPPP P P P P P P T
Sbjct: 463 APPPPPP-----PPPPPPPPPPPPPPPPPPFPPPPPPT 495
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 571 PVPPKSXXXPXXXPKGPTPXAPXPXXPTP 657
P PP P P P P P P PTP
Sbjct: 468 PPPPPPPPPPPPPPPPPPPPFPPPPPPTP 496
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 574 VPPKSXXXPXXXPKGPTPXAPXPXXPTPP 660
+PP P P P+P P P P PP
Sbjct: 1156 IPPPPPPPPPPPPSSPSPPPPPPPPPPPP 1184
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 571 PVPPKSXXXPXXXPKGPTPXAPXPXXPTP 657
P PP P P P P P P PTP
Sbjct: 1158 PPPPPPPPPPPSSPSPPPPPPPPPPPPTP 1186
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +1
Query: 550 GPXXGXX-PVPPKSXXXPXXXPKGPTPXAPXPXXPTPPGRG 669
GP G P+ P P P+GP P P P PG G
Sbjct: 400 GPGMGPPRPMGPPGPHGPPFGPRGPPPHGGPPRGPMGPGPG 440
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXP-IXPXXPG 154
PP P PPP GG P P P P + P PG
Sbjct: 411 PPGPHGPPFGPRGPPPHGGPPRGPMGPGPGMPPMRPG 447
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 258 PXPXXFFXXXPPPPPRGGXPXXPXXPXPIXP 166
P P PPPP GG P P P P P
Sbjct: 177 PAPAVPLAAASPPPPSGGPPPPPPPPPPPPP 207
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXPGT 151
PP P PPPPP G P P P P T
Sbjct: 365 PPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPT 401
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXPGT 151
PP P PPPPP G P P P P T
Sbjct: 375 PPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPT 411
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 267 GAPPXPXXFFXXXPPPPPRGGXPXXP 190
G PP P PPPPP G P P
Sbjct: 383 GPPPPPPPTNGPPPPPPPTNGPPPPP 408
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPT--PPGRG 669
P G P PP + P P PT P P PT PP G
Sbjct: 380 PTNGPPPPPPPTNGPPPPPP--PTNGPPPPPPPTNGPPSEG 418
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 267 GAPPXPXXFFXXXPPPPPRGGXP 199
G PP P PPPPP G P
Sbjct: 393 GPPPPPPPTNGPPPPPPPTNGPP 415
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 165 WGXXXXGXXGXGGXPPGGGGXAXQXKXXXXXXGPPXP 275
WG G GG PP G G GPP P
Sbjct: 556 WGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPP 592
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.5 bits (63), Expect = 4.5
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = +2
Query: 500 HXSRPPPAXEXRGPXXEAPXXGXARSPRKAXXXRXXXP-KVPHPG-XXPXXPQHRPAGGX 673
H S PPP GP P G ++ P P PG P P P G
Sbjct: 202 HGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSG- 260
Query: 674 KYXXGGPPP 700
G PPP
Sbjct: 261 ----GEPPP 265
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 267 GAPPXPXXFFXXXPPPPPRGG 205
G PP P PPPPP GG
Sbjct: 204 GIPPPPPPIRGGVPPPPPMGG 224
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXP 190
PP P PPPP RGG P P
Sbjct: 197 PPPPGPGGIPPPPPPIRGGVPPPP 220
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.5 bits (63), Expect = 4.5
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = +2
Query: 500 HXSRPPPAXEXRGPXXEAPXXGXARSPRKAXXXRXXXP-KVPHPG-XXPXXPQHRPAGGX 673
H S PPP GP P G ++ P P PG P P P G
Sbjct: 114 HGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSG- 172
Query: 674 KYXXGGPPP 700
G PPP
Sbjct: 173 ----GEPPP 177
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXP 166
PP P PPPPP P P P P P
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPPPPPPSTP 714
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXPG 154
PP P PPP P+ G P P P P G
Sbjct: 717 PPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPPGCAG 752
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 267 GAPPXPXXFFXXXPPPPPRGGXP 199
GAPP P F PPP GG P
Sbjct: 209 GAPPPPPPPFGAPPPPALNGGPP 231
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 553 PXXGXXPVPPKSXXXPXXXPKGPTPXAPXPXXPTPPGRGXKI 678
P P PP + P P G P AP P P G G +
Sbjct: 175 PAAPPAPPPPGAPAAPPAPPFGGPPSAPPPPPAPPVGGGGSL 216
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 264 APPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXPG 154
APP P PP PP GG P P P P P G
Sbjct: 180 APPPPGA--PAAPPAPPFGGPPSAP-PPPPAPPVGGG 213
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 267 GAPPXPXXFFXXXPPPPPRGGXPXXPXXP 181
GAPP P PPPP R G P P
Sbjct: 303 GAPPPPPSRGSAPPPPPARMGTAPPPPPP 331
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -3
Query: 267 GAPPXPXXFFXXXPPPPPRGGXPXXPXXPXPIXPXXPGT 151
G P P PPPPP G P P P PI P +
Sbjct: 352 GMAPPPVGGAAPPPPPPPPVGGP--PPPPPPIEGRPPSS 388
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = +1
Query: 571 PVPPKSXXXPXXXPKGP---TPXAPXPXXPTPPGRG 669
P PP + P P P TP P P P PP G
Sbjct: 95 PPPPATPPPPTMPPTPPPPQTPAPPGPDTPAPPAPG 130
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +1
Query: 577 PPKSXXXPXXXPKGPTPXAPXPXXPT-PPGRGXKIXP 684
PP S P P+ P P P PT PP R K P
Sbjct: 1077 PPPSTSQPVPPPRQPDPIPTNPAHPTEPPPRQPKPTP 1113
>SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26)
Length = 765
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +2
Query: 158 GXXGXXGXGXXGXXGXPPRGGGGGXXXKXKXGXGGA 265
G G G G G G GGGGG G GGA
Sbjct: 667 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGA 702
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +2
Query: 158 GXXGXXGXGXXGXXGXPPRGGGGGXXXKXKXGXGGA 265
G G G G G G GGGGG G GGA
Sbjct: 670 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGA 705
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 261 PPXPXXFFXXXPPPPPRGGXPXXPXXP 181
PP P PPPPP GG P P
Sbjct: 679 PPPPLPGGAAPPPPPPIGGGAPPPPPP 705
>SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055)
Length = 695
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 270 WGAPPXPXXFFXXXPPPPPRGGXP 199
+GAPP P P PP RGG P
Sbjct: 457 YGAPPLPPKRGGGPPLPPKRGGGP 480
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 23.8 bits (49), Expect(2) = 9.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 267 GAPPXPXXFFXXXPPPPP 214
G PP P PPPPP
Sbjct: 267 GHPPIPSASQNATPPPPP 284
Score = 23.0 bits (47), Expect(2) = 9.3
Identities = 10/28 (35%), Positives = 10/28 (35%)
Frame = -3
Query: 240 FXXXPPPPPRGGXPXXPXXPXPIXPXXP 157
F PPPP P P P P P
Sbjct: 299 FQPPPPPPTDFAPPPPPPEPTSELPPPP 326
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.148 0.511
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,878,200
Number of Sequences: 59808
Number of extensions: 235711
Number of successful extensions: 2066
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3035492608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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