Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_D10
         (1019 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.29 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.2  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   2.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   8.4  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 28.7 bits (61), Expect = 0.29
 Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
 Frame = -3

Query: 267 GAPPXPXXFFXXXPPPPPRGGXPXXPXXPXP--IXPXXPG 154
           G PP P          PPR G P  P  P P  + P  PG
Sbjct: 184 GMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPG 223



 Score = 25.8 bits (54), Expect = 2.1
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 225 PPPPRGGXPXXPXXPXPIXPXXP 157
           PP P G  P  P  P P+ P  P
Sbjct: 211 PPRPGGMYPQPPGVPMPMRPQMP 233


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.2
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +2

Query: 176 GXGXXGXXGXPPRGGGGGXXXKXKXGXGG 262
           G G  G  G  P GGGG        G GG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229



 Score = 24.6 bits (51), Expect = 4.8
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 158 GXXGXXGXGXXGXXGXPPRGGGGG 229
           G  G    G  G  G P  GGGGG
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGGGGG 229


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 2.1
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -3

Query: 267 GAPPXPXXFFXXXPPPPPRGGXPXXPXXPXPI 172
           G P  P       PPPPP  G P  P    P+
Sbjct: 572 GFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPL 603


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 8.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 414  AXXPFXLXPKNLPPXPRXLXPRH 346
            A  P  +  + LPP PR +  RH
Sbjct: 1115 APPPIPMRRRGLPPSPRTVRARH 1137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.148    0.511 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,561
Number of Sequences: 2352
Number of extensions: 7309
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 112641126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)