Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_D08
(1013 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 6e-23
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 93 2e-19
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 81 1e-15
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 7e-10
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 53 4e-07
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 32 0.85
SB_40567| Best HMM Match : Beta-lactamase (HMM E-Value=9.7e-28) 31 1.1
SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35) 31 1.5
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_39919| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_4889| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 105 bits (252), Expect = 6e-23
Identities = 64/161 (39%), Positives = 91/161 (56%), Gaps = 10/161 (6%)
Frame = +3
Query: 132 TLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQ 311
T++L++G +PV+ LGTW K K QV N AV +A++ GY HID AY Y E +
Sbjct: 3 TVKLNNGLEMPVLGLGTW-----KSKPGQVEN----AVKFAIKEGYRHIDCAYAYRNEKE 53
Query: 312 VGRALTKKFSEGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIA 491
VG AL + ++R+ +FIT+KLWN+ H + V SL++L L+Y+DLYLIHWP++
Sbjct: 54 VGDALRELLGSVVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLS 113
Query: 492 MFENDTLL-----DNV-----DFLDTWRGMIDAKKLGLTKS 584
+ D NV D DTW+ M GL K+
Sbjct: 114 FRDGDEFFPKDEQGNVLYAYHDPCDTWKAMEKLVDEGLVKA 154
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 93.5 bits (222), Expect = 2e-19
Identities = 43/85 (50%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = +3
Query: 240 AVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEG-LKRESIFITTKLWNSYHEREQVI 416
AV A+E GY HID A YG E ++G AL++ +EG +KRE +F+T+KLW H + V+
Sbjct: 70 AVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKLWCDSHHPDDVL 129
Query: 417 PALRKSLENLNLEYVDLYLIHWPIA 491
PA + +L+NL L+Y+DLYLIH P+A
Sbjct: 130 PACQATLKNLQLDYLDLYLIHIPVA 154
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 81.4 bits (192), Expect = 1e-15
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
Frame = +3
Query: 231 TEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGLKRESIFITTKLWNSYHEREQ 410
++QAV++ALE+GY IDTA +Y E VG A+ + R I++ TK++ + H ++
Sbjct: 88 SKQAVLWALESGYRLIDTASRYHNEQSVGEAVR---CSNIPRCEIYVVTKVYFTEHGYKE 144
Query: 411 VIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRGMIDAKKLGLTKS*A 590
+ A KSL L L YVDLYLIH+P+ + +W+ MID + GL +S
Sbjct: 145 TMDAFYKSLTRLGLGYVDLYLIHFPVPS----------GVVGSWQAMIDLRSRGLIRSIG 194
Query: 591 SPTLTRTNPEDHRQRTGEXSAL-QIEL 668
+ E RQ+TG A+ QIE+
Sbjct: 195 VSNFNIQHLEALRQQTGVVPAVNQIEV 221
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 67.3 bits (157), Expect = 2e-11
Identities = 36/92 (39%), Positives = 54/92 (58%)
Frame = +3
Query: 210 VVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGLKRESIFITTKLWN 389
V ++ E ++AL+ GY +DTA Y E +VG A+ K GLKRE I++TTKL
Sbjct: 39 VFRLETGCEDVCLFALKNGYRMLDTADIYQNEKEVGSAVRKS---GLKREDIYVTTKLKP 95
Query: 390 SYHEREQVIPALRKSLENLNLEYVDLYLIHWP 485
S + ++S++ L++ YVDL+LIH P
Sbjct: 96 SEEGHSNALKYAKESIKKLDIGYVDLFLIHTP 127
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 62.1 bits (144), Expect = 7e-10
Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Frame = +3
Query: 141 LSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGI-EDQVG 317
L+SG +PV+ GT + DT V ALE GY IDTA Y + E QV
Sbjct: 331 LASGYTMPVMGFGT----------ATLGEDTLSVVKTALETGYRLIDTAQGYPLSEPQVA 380
Query: 318 RALTKKFSEGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIH 479
+A+ G+ R+ IFI TKL Y E + ++ SL L+ +Y+DL+LIH
Sbjct: 381 KAIA---DSGIPRKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIH 431
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 52.8 bits (121), Expect = 4e-07
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = +3
Query: 231 TEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGLKRESIFITTKLWNSYHEREQ 410
T+QAV++ALE GY IDTA Y E +VG AL + + R +++ TK++++ H E+
Sbjct: 24 TKQAVLWALENGYRMIDTAASYNNEKRVGEALRE---SAVPRSEVYLVTKVYHTDHGYEK 80
Query: 411 VIPALRKSLENL 446
+ A +SL L
Sbjct: 81 TMKAYDRSLSAL 92
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 31.9 bits (69), Expect = 0.85
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 429 KSLENLNLEYVDLYLIHW 482
KSLE L ++ +DLYL+HW
Sbjct: 50 KSLERLGIDRIDLYLLHW 67
>SB_40567| Best HMM Match : Beta-lactamase (HMM E-Value=9.7e-28)
Length = 1006
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -2
Query: 364 IDSLLSPSENFLVRALPTWSSIPYLYAVSMCVYPASNAYMTACSVSL 224
+ S LSPS ++ + L T++ + + +++ YP N T C+ L
Sbjct: 149 VSSSLSPSSSYSLNILITFTKLAIIITINIIYYPTFNLMCTNCNKKL 195
>SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35)
Length = 1171
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 385 QSLVVIKIDSLLSPSENFLVRALPTWSSIPYLYAVSMC 272
+S ++ D L SE FLVR P W I Y++A+ +C
Sbjct: 572 RSADLVSWDGFLRRSEQFLVRDQPGWHRI-YIFALEVC 608
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 351 KRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIA 491
K + + T+ H+RE + LR+ LE L EY DL H I+
Sbjct: 871 KVKPLLNVTRQEEELHQREDELRTLREKLEKLETEYTDLEKKHSQIS 917
>SB_39919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +3
Query: 135 LQLSSGGNIPVVALGTWLGHRPKGKVVQVTND---TEQAVIYALEAGYTHIDTAYK 293
+ L+ +P + W+GH P G + ND T QAV+ + +G +++ K
Sbjct: 54 ISLTGDAIVPGLYCSGWVGHGPVGVIATTMNDAYATGQAVVEDINSGLLKAESSTK 109
>SB_4889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 135 LQLSSGGNIPVVALGTWLGHRPKGKVVQVTND---TEQAVI 248
+ L+ G +P + W+GH P G + ND T QAV+
Sbjct: 105 ISLTGGAIVPGLYCSGWVGHGPVGVIATTMNDAYATGQAVV 145
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,829,694
Number of Sequences: 59808
Number of extensions: 495921
Number of successful extensions: 1254
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3011777822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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