Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_D07
         (999 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    23   3.3  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    23   3.3  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   4.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   7.5  

>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 15/48 (31%), Positives = 18/48 (37%)
 Frame = +2

Query: 569 GLVLNVEK*SYYCRPLAAKPLTEEEQSVLNQIAFKGRR*SEFXAASTY 712
           G  LNVEK     R L     TE+   ++ Q   K     E   A  Y
Sbjct: 68  GNTLNVEKLESGTRELTPDDFTEDVHEIIEQCVSKAADEDECMVARKY 115


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 15/48 (31%), Positives = 18/48 (37%)
 Frame = +2

Query: 569 GLVLNVEK*SYYCRPLAAKPLTEEEQSVLNQIAFKGRR*SEFXAASTY 712
           G  LNVEK     R L     TE+   ++ Q   K     E   A  Y
Sbjct: 68  GNTLNVEKLESGTRELTPDDFTEDVHEIIEQCVSKAADEDECMVARKY 115


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 112 LNKMAEIVEKYNTKCPGVKRLMREAIELAEATE 210
           +++  E+  KY  KC G  +   E +E  E  E
Sbjct: 29  IDEFREMTSKYRKKCIGETKTTIEDVEATEYGE 61


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 29  EFLKI*STHCFFIIQCCMF 85
           +FL     HCF +  CC F
Sbjct: 734 QFLCRYEAHCFALCHCCDF 752


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,887
Number of Sequences: 438
Number of extensions: 4391
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33137286
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)